BAC Information

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BAC

Clone NameB6Ng01-192F13
Chromosome19 (Build37)
Map Location 23,040,309 - 23,041,398
singlet/doubletsinglet
Overlap geneTrpm3
Upstream geneEG433230
Downstream geneKlf9, Smc5, Mamdc2, 1700028P14Rik, LOC670565, LOC226030, EG625193, Ptar1, Apba1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192F13.bB6Ng01-192F13.g
ACCGA015609GA015610
length1,0821,110
definitionB6Ng01-192F13.b B6Ng01-192F13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagaatggttgtatcagtttgcaatcctatgagcaatggaggac
cgttcctctttctctacatcctcaccagcatgtgctgtcacttgagtttt
tgatcttagccactctgactggtatgaggtggaatctcagggtcattttg
atctacatttctctgatgactaaggactttgaacatttctttaggtgctt
cttagccatctgtgattttctgttgtgaattctctgtttagctttgtacc
ccatttttattttttatatatatttttattgaatttttccttatttacat
ttcaaatgtttccccttttcaggtctccccttcagaaacgcccatccaat
ttcttcctcccgtgcctctatgagggtgctccccacccatccactcctat
cctcccaccctggtaaaatgttctgtagatatctgttaaatccatttggg
tcataacttctgttaatatcactgtgtccctgtttagtttctctgtcaat
ggcctgtccattggtgagagtggggtattgaagtctctcactattaatgt
atgagattcaatgtgtgttttgagctttagtaaagtttcttttttgaatg
tgagtgaccttgcatttgagacacagatgttcagaattgagactttctct
tggtagatttttcctttgatgaatatgatgtgtccttccctcgtttgata
acttttggttgaaagtctattttatcagatatcacaatgataactccagc
ttgtttcttgggaccatttgcttgggaaactttttttttcagccttttaa
tccgaggtagtttctgtctttgtcactgaagtgtgtttcttgtatgcagc
aaaatgctggatcctgtttaaagtatccagtctgttagcctgtgtctttt
ttattgggagaattaatccattgatgttgagaaatattaaagacagatga
ttgtcagttcctattatttttgttgctggaggtggtctatgggtgttgtg
attctcttcttttgtgtttgtatgaatgacatttctgtggtttctgggta
tagtaccttcctatgtggagatttccttctag
gaattcctatcaggacagttgtatctcagtctccctagtgaaggctgagg
atacataggcagctgctgttcaaacctgtgagttaaggtggtaatatagc
aggtggattgtctcaacatcccttatttccccctttccctgtctccaagc
tccttgctgagtgactgtggaattcccattgcatgtatggaatctatttc
cttggtctttgagtctcaatttggtgacataggtgactttggtgaatggg
atgtttgtcaatatttgtcaaccgatgtaggacttggagaaagccctttt
gcatctgtttccactcttctatctcaaccacagccacgacagacatgctt
atactcgccagtcagaagccgagacacaggcacgtggagcctcagcccct
atatgcttatgttgtctgagctgatgctctcctggatcagctgatagctg
aatgctaggcagccaaggcaagaaaagccagttagtcagtgcacaggctt
gtaaactcattaggtgctgtgggttaaagcatggggtttggaatggtttc
cctctcgcataatcgagtctactgatactttttccccttctcattgtggg
aagaggtgggcctttaagaagacaaagccctttctccactttttctgctc
tgatgaaaagaaaatgaattctctctcttttctcccctaaccccagaaca
cccccaatagatccacaacatacctaggtttgggaatcccgattatttct
aagtcattagatttagaatagcgaattgatttccaagtagctcaaagcta
aaactcagcaaatagcaatcgactataagccagatgggccctaaagaagt
taaagactgtgtcaccacccaggtggggcaggcttaagaaactttccacc
tctaattcaggtcatgactgattggaaacatccttatcaactgcccagtg
accagggagcttaatcagacttgtccttcagaagcctaattcttcagtgc
agagattttttagcttagacaatggcagataactttaaattgaaaaagac
cgggtaaaaccaggccatatttggttccctaagagtgaagcaaggtatct
tgaaaagatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_23040309_23041398
seq2: B6Ng01-192F13.g_65_1174 (reverse)

seq1  CATCTTTTC-AGATACCTTGCTTCACTCTTAGGGGACC-AATATGGCCTG  48
      ||||||||| |||||||||||||||||||||||| ||| |||||||||||
seq2  CATCTTTTCAAGATACCTTGCTTCACTCTTAGGGAACCAAATATGGCCTG  50

seq1  GTTTTA-CCTGTC-TTTTCAATT--AAG-TATCTGCCATTGTCT-AGCT-  91
      |||||| || ||| |||||||||  ||| ||||||||||||||| |||| 
seq2  GTTTTACCCGGTCTTTTTCAATTTAAAGTTATCTGCCATTGTCTAAGCTA  100

seq1  AAAAATCTCTGCACTGAAG-ATTA-GCTTCTGAAGGACAAGTCTGATT-A  138
      ||||||||||||||||||| |||| ||||||||||||||||||||||| |
seq2  AAAAATCTCTGCACTGAAGAATTAGGCTTCTGAAGGACAAGTCTGATTAA  150

seq1  GCT-CCTGGTCACTGGGCAG-TGAT-AGGATG-TTCCAATCAGTCATGAC  184
      ||| |||||||||||||||| |||| |||||| |||||||||||||||||
seq2  GCTCCCTGGTCACTGGGCAGTTGATAAGGATGTTTCCAATCAGTCATGAC  200

seq1  CTGAATTAGAGGTGG-AAGTTTCTTAAGCCTGCCCCACCTGGGT-GTGAC  232
      ||||||||||||||| |||||||||||||||||||||||||||| |||||
seq2  CTGAATTAGAGGTGGAAAGTTTCTTAAGCCTGCCCCACCTGGGTGGTGAC  250

seq1  ACAGTCTTTAAC-TCTTTAGGGCCCATCTGGCTTATAGTCGATTGCTATT  281
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ACAGTCTTTAACTTCTTTAGGGCCCATCTGGCTTATAGTCGATTGCTATT  300

seq1  TGCTGAGTTTTAGCTTTGAGCTACTTGGAAATCAATTCGCTATTCT-AAT  330
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TGCTGAGTTTTAGCTTTGAGCTACTTGGAAATCAATTCGCTATTCTAAAT  350

seq1  CTAATGACTTAGAAATAATCGGGATTCCCAAACCTAGGTATGTTGTGGAT  380
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGACTTAGAAATAATCGGGATTCCCAAACCTAGGTATGTTGTGGAT  400

seq1  CTATTGGGGGTGTTCTGGGGTTAGGGGAGAAAAGAGAGAGAATTCATTTT  430
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGGGGGTGTTCTGGGGTTAGGGGAGAAAAGAGAGAGAATTCATTTT  450

seq1  CTTTTCATCAGAGCAGAAAAAGTGGAGAAAGGGCTTTGTCTTCTTAAAGG  480
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCATCAGAGCAGAAAAAGTGGAGAAAGGGCTTTGTCTTCTTAAAGG  500

seq1  CCCACCTCTTCCCACAATGAGAAGGGGAAAAAGTATCAGTAGACTCGATT  530
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCTCTTCCCACAATGAGAAGGGGAAAAAGTATCAGTAGACTCGATT  550

seq1  ATGCGAGAGGGAAACCATTCCAAACCCCATGCTTTAACCCACAGCACCTA  580
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGAGAGGGAAACCATTCCAAACCCCATGCTTTAACCCACAGCACCTA  600

seq1  ATGAGTTTACAAGCCTGTGCACTGACTAACTGGCTTTTCTTGCCTTGGCT  630
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTTTACAAGCCTGTGCACTGACTAACTGGCTTTTCTTGCCTTGGCT  650

seq1  GCCTAGCATTCAGCTATCAGCTGATCCAGGAGAGCATCAGCTCAGACAAC  680
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGCATTCAGCTATCAGCTGATCCAGGAGAGCATCAGCTCAGACAAC  700

seq1  ATAAGCATATAGGGGCTGAGGCTCCACGTGCCTGTGTCTCGGCTTCTGAC  730
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCATATAGGGGCTGAGGCTCCACGTGCCTGTGTCTCGGCTTCTGAC  750

seq1  TGGCGAGTATAAGCATGTCTGTCGTGGCTGTGGTTGAGATAGAAGAGTGG  780
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCGAGTATAAGCATGTCTGTCGTGGCTGTGGTTGAGATAGAAGAGTGG  800

seq1  AAACAGATGCAAAAGGGCTTTCTCCAAGTCCTACATCGGTTGACAAATAT  830
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGATGCAAAAGGGCTTTCTCCAAGTCCTACATCGGTTGACAAATAT  850

seq1  TGACAAACATCCCATTCACCAAAGTCACCTATGTCACCAAATTGAGACTC  880
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAACATCCCATTCACCAAAGTCACCTATGTCACCAAATTGAGACTC  900

seq1  AAAGACCAAGGAAATAGATTCCATACATGCAATGGGAATTCCACAGTCAC  930
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACCAAGGAAATAGATTCCATACATGCAATGGGAATTCCACAGTCAC  950

seq1  TCAGCAAGGAGCTTGGAGACAGGGAAAGGGGGAAATAAGGGATGTTGAGA  980
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAAGGAGCTTGGAGACAGGGAAAGGGGGAAATAAGGGATGTTGAGA  1000

seq1  CAATCCACCTGCTATATTACCACCTTAACTCACAGGTTTGAACAGCAGCT  1030
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCACCTGCTATATTACCACCTTAACTCACAGGTTTGAACAGCAGCT  1050

seq1  GCCTATGTATCCTCAGCCTTCACTAGGGAGACTGAGATACAACTGTCCTG  1080
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTATGTATCCTCAGCCTTCACTAGGGAGACTGAGATACAACTGTCCTG  1100

seq1  ATAGGAATTC  1090
      ||||||||||
seq2  ATAGGAATTC  1110