BAC Information

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BAC

Clone NameB6Ng01-192H23
Chromosome19 (Build37)
Map Location 31,183,319 - 31,314,827
singlet/doubletdoublet
Overlap genePrkg1, 8430431K14Rik
Upstream geneGldc, EG625917, Mbl2, LOC100042088, LOC668020, EG546723, Dkk1, LOC625995, Cstf2t
Downstream gene1810073H04Rik, Asah2, EG668042, Sgms1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192H23.bB6Ng01-192H23.g
ACCGA015723GA015724
length1,1261,103
definitionB6Ng01-192H23.b B6Ng01-192H23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,183,319 - 31,184,454)(31,313,725 - 31,314,827)
sequence
gaattccatattcttacagtcatcagaaagaggttcttaggaaaaaaacc
cacttcaaatttatccaaatttatcccaaatcagtgaactttaaatcctt
gtacagaaaacagaaatcaagggcacttgccagtgatagggcacttgcca
gaaaatatttgacttaggttacaagtaaataactactagcctttgatctt
aacttagtaaatacgtccaagtagcgtatgctgttgctcatctctggtct
agatgctgcagaatccaggacttggaacggctaaagcaccgtctcaggca
aactaagacagaatgttattttagacttaatggtgtttaggttttttccc
tttgctagattatgtcttggcttgagaaaatctgcttttttttttttttt
taaataacattttacttgttgcttacagagtcggtctttttcaacaggaa
aaggatatgacacagtaactcctatccactcactcctgctgtcagtaaaa
atgccctactgtaccgacttatacacatatttcagtcatttcccagatat
tttagagtaccatggccttgctagaacagagaccctttaaggttctttta
ttatttccgggcagtgtaatgattcacgcactgtctcgtacgtagcaaga
ttgaaagagttgctggtaattttcttctcactataaaccattctgccctc
ttctccagaagcagaaatgtttccattttcagcagtgtgtgcttcagaca
gatagataaacacacacacacacacacacacacactggactaaactgaag
actatacatattaacttaaaatctgaccattttaatctctgcacttccct
ctttaatcctctttcttctacattaacatttatgaaattagggtatatct
tagaatctacatgagaaagaaccttgctagactctaggtagaaaagtttc
aataacattattattgggccaattggccaactagagaaattatgtttcag
cgatgttagactatactgctcttcaaactctcacctcagtttaattactg
caattgtagtaaattcaactacaatatttggaattctatctttaatgttc
ttaggaggattaatagctagcagttt
gaattcattcatttacttcatcctaagactacaaaactctggatcagaga
aagcgatccacttaacaactgcaatgctcactaaagcttgagaacttaag
gaaaaagatcttaaagatggacgcatgaaaggagacacattcataatcct
cccgcaagtgtggatagaatctctcgctttagtagcatacagcatggctc
tatgaacgtgaaatctatgcggctctaagggaaatcaccacattttataa
gcttggattttttttttcctcttaagatggtgattattttgataagcaag
tagggataagatctggggaacaaggaagaatatgccaaagcaagaagtag
agacaggtgagacatattcaagagaagagtcactgcagatgcctggaagg
gaaacaaatagagatgctcaaaggttctgctgcctcctcagttcccaggg
ccagctccatggccagttccatggccagctacgtggccagccattcagct
attggccttcctttgaaccatttccctcctcgatatcaaatactcttgaa
attaagatattttgaattatcagcatctgtgttctaaggtcgtagtcgtt
cactgaaaccagtcactacttctttgaaaggcataaatgctacagatatt
gattcgcacagacatgtttgcgtgcctgtagtgtgagcactgcttggcct
tatttcccagccctgggagagagtgtttacagcttcccctgtgcactatg
tttgaagaccataaatacggctctctttcaacatgttgtgctctaaaaca
tttactgggaaaaaaccattttggggatctaggtgaagcctacataggaa
atctttatgctcacgttgccacttttcccgtaaagtcaaaatcacttcaa
aataaagtttcaaggttccagcgcccttacattttcactgtttccctttt
cctgcctctttgctgctaggcaggtcttctcatgaaatcacaagaatcgt
ctctccgcacttactcacaatcatgcaataaaatatctactaccagcccc
tattctgtcaacccttctctgtttgcattctatttcaatcatacctgtca
gac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_31183319_31184454
seq2: B6Ng01-192H23.b_49_1174

seq1  GAATTCCATATTCTTACAGTCATCAGAAAGAGGTTCTTAGGAAAAAAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATATTCTTACAGTCATCAGAAAGAGGTTCTTAGGAAAAAAACC  50

seq1  CACTTCAAATTTATCCAAATTTATCCCAAATCAGTGAACTTTAAATCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCAAATTTATCCAAATTTATCCCAAATCAGTGAACTTTAAATCCTT  100

seq1  GTACAGAAAACAGAAATCAAGGGCACTTGCCAGTGATAGGGCACTTGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGAAAACAGAAATCAAGGGCACTTGCCAGTGATAGGGCACTTGCCA  150

seq1  GAAAATATTTGACTTAGGTTACAAGTAAATAACTACTAGCCTTTGATCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATATTTGACTTAGGTTACAAGTAAATAACTACTAGCCTTTGATCTT  200

seq1  AACTTAGTAAATACGTCCAAGTAGCGTATGCTGTTGCTCATCTCTGGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAGTAAATACGTCCAAGTAGCGTATGCTGTTGCTCATCTCTGGTCT  250

seq1  AGATGCTGCAGAATCCAGGACTTGGAACGGCTAAAGCACCGTCTCAGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTGCAGAATCCAGGACTTGGAACGGCTAAAGCACCGTCTCAGGCA  300

seq1  AACTAAGACAGAATGTTATTTTAGACTTAATGGTGTTTAGGTTTTTTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAGACAGAATGTTATTTTAGACTTAATGGTGTTTAGGTTTTTTCCC  350

seq1  TTTGCTAGATTATGTCTTGGCTTGAGAAAATCTGCTTTTTTTTTTTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTAGATTATGTCTTGGCTTGAGAAAATCTGCTTTTTTTTTTTTTTT  400

seq1  TAAATAACATTTTACTTGTTGCTTACAGAGTCGGTCTTTTTCAACAGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAACATTTTACTTGTTGCTTACAGAGTCGGTCTTTTTCAACAGGAA  450

seq1  AAGGATATGACACAGTAACTCCTATCCACTCACTCCTGCTGTCAGTAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATATGACACAGTAACTCCTATCCACTCACTCCTGCTGTCAGTAAAA  500

seq1  ATGCCCTACTGTACCGACTTATACACATATTTCAGTCATTTCCCAGATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCTACTGTACCGACTTATACACATATTTCAGTCATTTCCCAGATAT  550

seq1  TTTAGAGTACCATGGCCTTGCTAGAACAGAGACCCTTTAAGGTTCTTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAGTACCATGGCCTTGCTAGAACAGAGACCCTTTAAGGTTCTTTTA  600

seq1  TTATTTCCGGGCAGTGTAATGATTCACGCACTGTCTCGTACGTAGCAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCCGGGCAGTGTAATGATTCACGCACTGTCTCGTACGTAGCAAGA  650

seq1  TTGAAAGAGTTGCTGGTAATTTTCTTCTCACTATAAACCATTCTGCCCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAGAGTTGCTGGTAATTTTCTTCTCACTATAAACCATTCTGCCCTC  700

seq1  TTCTCCAGAAGCAGAAATGTTTCCATTTTCAGCAGTGTGTGCTTCAGACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCAGAAGCAGAAATGTTTCCATTTTCAGCAGTGTGTGCTTCAGACA  750

seq1  GATAGATAAACACACACACACACACACACACACACTGGACTAAACTGAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGATAAACACACACACACACACACACACACACTGGACTAAACTGAAG  800

seq1  ACTATACATATTAACTTAAAATCTGACCATTTTAATCTCTGCACTTCCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATACATATTAACTTAAAATCTGACCATTTTAATCTCTGCACTTCCCT  850

seq1  CTTTAATCCTCTTTCTTCTACATTAACATTTATGAAATTAGGGTATATCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATCCTCTTTCTTCTACATTAACATTTATGAAATTAGGGTATATCT  900

seq1  TAGAATCTACATGAGAAAGAACCTTGCTAGACTCTAGGTAGAAAAGTTTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATCTACATGAGAAAGAACCTTGCTAGACTCTAGGTAGAAAAGTTTC  950

seq1  AATAACATTATTATT-GGCCAATTGGCCAACTAGAGAAATTATGTTTCAG  999
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AATAACATTATTATTGGGCCAATTGGCCAACTAGAGAAATTATGTTTCAG  1000

seq1  CGATGTTAGACTATACCTGCTCTTCCAAACTCTCACCTCAGTTTAATTAC  1049
      ||||||||||||||| |||||||| |||||||||||||||||||||||||
seq2  CGATGTTAGACTATA-CTGCTCTT-CAAACTCTCACCTCAGTTTAATTAC  1048

seq1  TGCCATTGTAAGTTAAAATTCAACTTACATATTT-GAATTCTTAATCTTT  1098
      ||| ||||| |||  ||||||||||   |||||| |||||||  ||||||
seq2  TGCAATTGT-AGT--AAATTCAACTACAATATTTGGAATTCT--ATCTTT  1093

seq1  TAAAATGTCCTTAGGAGGATTACATAGCCTAGCAGTTT  1136
         ||||| ||||||||||||| |||| ||||||||||
seq2  ---AATGTTCTTAGGAGGATTA-ATAG-CTAGCAGTTT  1126

seq1: chr19_31313725_31314827
seq2: B6Ng01-192H23.g_66_1168 (reverse)

seq1  GTCTGACA-GTATGATGTGAATAGGAAATGCAAACAGAGGAGTGTTTGAC  49
      |||||||| |||||||   |||||  ||||||||||||| || | |||||
seq2  GTCTGACAGGTATGATTGAAATAG--AATGCAAACAGAGAAG-GGTTGAC  47

seq1  AG-ATAGGGGCTGGGTAGTAGGATA-TTTATTGCATGA-TGTGAAGTAAG  96
      || ||||||||| ||||||| |||| |||||||||||| |||| ||||||
seq2  AGAATAGGGGCT-GGTAGTA-GATATTTTATTGCATGATTGTG-AGTAAG  94

seq1  TGCGGAGAAGACGA-TCTTGTGATTTCATGAGAAGACCTGCCTAGCAGCA  145
      ||||||| |||||| |||||||||||||||||||||||||||||||||||
seq2  TGCGGAG-AGACGATTCTTGTGATTTCATGAGAAGACCTGCCTAGCAGCA  143

seq1  AAGAGGCAGGAAAAGGGAAACAGTG-AAATGT-AGGGCGCCTGGAACC-T  192
      ||||||||||||||||||||||||| |||||| |||||| |||||||| |
seq2  AAGAGGCAGGAAAAGGGAAACAGTGAAAATGTAAGGGCG-CTGGAACCTT  192

seq1  GAAACTTTATTTTGAAGTGATTTTGACTTTACGGGAAAAGTGGCAACGTG  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTTTATTTTGAAGTGATTTTGACTTTACGGGAAAAGTGGCAACGTG  242

seq1  AGCATAAAGATTTCCTATGTAGGCTTCACCTAGATCCCCAAAATGGTTTT  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAAAGATTTCCTATGTAGGCTTCACCTAGATCCCCAAAATGGTTTT  292

seq1  TTCCCAGTAAATGTTTTAGAGCACAACATGTTGAAAGAGAGCCGTATTTA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAGTAAATGTTTTAGAGCACAACATGTTGAAAGAGAGCCGTATTTA  342

seq1  TGGTCTTCAAACATAGTGCACAGGGGAAGCTGTAAACACTCTCTCCCAGG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTTCAAACATAGTGCACAGGGGAAGCTGTAAACACTCTCTCCCAGG  392

seq1  GCTGGGAAATAAGGCCAAGCAGTGCTCACACTACAGGCACGCAAACATGT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGAAATAAGGCCAAGCAGTGCTCACACTACAGGCACGCAAACATGT  442

seq1  CTGTGCGAATCAATATCTGTAGCATTTATGCCTTTCAAAGAAGTAGTGAC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCGAATCAATATCTGTAGCATTTATGCCTTTCAAAGAAGTAGTGAC  492

seq1  TGGTTTCAGTGAACGACTACGACCTTAGAACACAGATGCTGATAATTCAA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTCAGTGAACGACTACGACCTTAGAACACAGATGCTGATAATTCAA  542

seq1  AATATCTTAATTTCAAGAGTATTTGATATCGAGGAGGGAAATGGTTCAAA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTTAATTTCAAGAGTATTTGATATCGAGGAGGGAAATGGTTCAAA  592

seq1  GGAAGGCCAATAGCTGAATGGCTGGCCACGTAGCTGGCCATGGAACTGGC  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGCCAATAGCTGAATGGCTGGCCACGTAGCTGGCCATGGAACTGGC  642

seq1  CATGGAGCTGGCCCTGGGAACTGAGGAGGCAGCAGAACCTTTGAGCATCT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAGCTGGCCCTGGGAACTGAGGAGGCAGCAGAACCTTTGAGCATCT  692

seq1  CTATTTGTTTCCCTTCCAGGCATCTGCAGTGACTCTTCTCTTGAATATGT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTGTTTCCCTTCCAGGCATCTGCAGTGACTCTTCTCTTGAATATGT  742

seq1  CTCACCTGTCTCTACTTCTTGCTTTGGCATATTCTTCCTTGTTCCCCAGA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCTGTCTCTACTTCTTGCTTTGGCATATTCTTCCTTGTTCCCCAGA  792

seq1  TCTTATCCCTACTTGCTTATCAAAATAATCACCATCTTAAGAGGAAAAAA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATCCCTACTTGCTTATCAAAATAATCACCATCTTAAGAGGAAAAAA  842

seq1  AAAATCCAAGCTTATAAAATGTGGTGATTTCCCTTAGAGCCGCATAGATT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCCAAGCTTATAAAATGTGGTGATTTCCCTTAGAGCCGCATAGATT  892

seq1  TCACGTTCATAGAGCCATGCTGTATGCTACTAAAGCGAGAGATTCTATCC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGTTCATAGAGCCATGCTGTATGCTACTAAAGCGAGAGATTCTATCC  942

seq1  ACACTTGCGGGAGGATTATGAATGTGTCTCCTTTCATGCGTCCATCTTTA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTGCGGGAGGATTATGAATGTGTCTCCTTTCATGCGTCCATCTTTA  992

seq1  AGATCTTTTTCCTTAAGTTCTCAAGCTTTAGTGAGCATTGCAGTTGTTAA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTTTTTCCTTAAGTTCTCAAGCTTTAGTGAGCATTGCAGTTGTTAA  1042

seq1  GTGGATCGCTTTCTCTGATCCAGAGTTTTGTAGTCTTAGGATGAAGTAAA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATCGCTTTCTCTGATCCAGAGTTTTGTAGTCTTAGGATGAAGTAAA  1092

seq1  TGAATGAATTC  1103
      |||||||||||
seq2  TGAATGAATTC  1103