BAC Information

Click to search

BAC

Clone NameB6Ng01-192P08
Chromosome3 (Build37)19 (Build37)
Map Location 16,910,630 - 16,910,66131,941,780 - 31,942,787
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneYthdf3, LOC100040034
Downstream geneLOC100040059, EG383936, LOC622737, ENSMUSG00000074674, LOC100040120, Cypt12, LOC545508
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192P08.bB6Ng01-192P08.g
ACCGA016062GA016063
length6201,013
definitionB6Ng01-192P08.b B6Ng01-192P08.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(16,910,630 - 16,910,661)(31,941,780 - 31,942,787)
sequence
gaattcaaaacttctctaaaataatgtctattttgaaagatagcaaaatg
cattattgacagtaataccaggagttaaataggacatagtactaccagag
gacccagctatatcactccagggcatatacccagaagatgctctaacatt
taataaggacacatgctccactatgttcatagcagccatatatatactag
ccagaagctggaaagaacccagatgtccttcaacagaggaatggatacag
aaaatgtggtacatttacacaatggaatactactcacctattaaaacgat
gaattcgtgaaatccctaggcaaatggatagaactagaaaatatcatcct
gagagaggtaacacaatcacaaaagaatgcacatggtatacactcactgg
taagtggatactagcccagaaactcgggatagatacaattcacagaccaa
atgaagttcaagaagaaggaagaccaaagtgtggatgctttagtgcttct
tagaagggggaacaaaatacccatgggaggaagtacagagacaaagtgtg
gagtagagattgaaggaaagaccatccagagactgccccacctggggatc
catcccatatacagtcacca
gaattcaggccagatcaggttgggaaaacatttcacttcgtaggatttgc
ttgttcagatttgaagagggagcttgctcttatgtaagagccagtgctgt
tgttcattgcttgaaatctcagcagttgctgtgcttcttaaagaatagat
gacttgtattttataaaaatgtaaactctatcattaaattatgcagcatg
agcaccagtctaaataataaacctaaaaggattttaaaaatctgtttata
agataaaaagaacaaacccccttacttttgagtgatttttctttttcttt
tccttttcctattttattttttacattcaaggcttgcaaaacacaggctg
taaaactggaattaaggaatacatttcattggcttcaggtcaagtaagaa
gagcttaatttcccagaagccaactttggtcacttttatctgtagcaaaa
tgtgaatgatcaagggatgccaccattgatgagtttttttttttttttga
ttagagaggagattaaagatctatttattgcagttgtcattctgcctaca
gctttactcttcattgatttacatttctttccagtgagtacacacctgtc
ctaacaaaagcacctctagaattattgatttgccctggaattgtgcttat
ggagagtcagctagggctaccagtcactgtttctcacatacggacattca
aaactaaatgtctctacttatttcttctagggaatggaactgttcaccag
aaaccttgttagttttcctaagagaagctcaaccaaggcttgtctggctt
cccagtgagtgaggaattatttgagtctgatcctacaaagaattgttgat
atggagaggctgaaggtcctggcagcagagggtcctgattgtggtggtaa
gtggctggactgtggtaagtgatataatatatatatgaaagcaggaccct
ttaggttagttggtggagacggaaaaacatacacacacacaccgcaccac
actgcacacacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_16910630_16910661
seq2: B6Ng01-192P08.b_635_666 (reverse)

seq1  TGGTGACTGTATATGGGATAGATCCCCAGGTG  32
      ||||||||||||||||||| ||||||||||||
seq2  TGGTGACTGTATATGGGATGGATCCCCAGGTG  32

seq1: chr19_31941780_31942787
seq2: B6Ng01-192P08.g_65_1077 (reverse)

seq1  GTGTGTGTGC-GTGT-GTGCGTGTGTGTGTGT-TATGTTTTTCTGTCTCC  47
      |||||||||| |||| ||||| |||||||||| |||||||||| ||||||
seq2  GTGTGTGTGCAGTGTGGTGCG-GTGTGTGTGTGTATGTTTTTCCGTCTCC  49

seq1  ACCAACT-ACCTAAAGGGTCCTGCTTTCATATATATA-TATATCACTTAC  95
      ||||||| ||||||||||||||||||||||||||||| ||||||||||||
seq2  ACCAACTAACCTAAAGGGTCCTGCTTTCATATATATATTATATCACTTAC  99

seq1  CACAGTCCAGCCACCTACCA-CACAATCAGGACCCTCTGCTGCCAGGACC  144
      |||||||||||||| ||||| |||||||||||||||||||||||||||||
seq2  CACAGTCCAGCCACTTACCACCACAATCAGGACCCTCTGCTGCCAGGACC  149

seq1  TTCAGCCTCTCAATATCAACAATTCTTTGTAGGATCAGACTCAAATAATT  194
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCCTCTCCATATCAACAATTCTTTGTAGGATCAGACTCAAATAATT  199

seq1  CCTCACTCACTGGGAAGCCAGACAAGCCTTGGTTGAGCTTCTCTTAGGAA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACTCACTGGGAAGCCAGACAAGCCTTGGTTGAGCTTCTCTTAGGAA  249

seq1  AACTAACAAGGTTTCTGGTGAACAGTTCCATTCCCTAGAAGAAATAAGTA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAACAAGGTTTCTGGTGAACAGTTCCATTCCCTAGAAGAAATAAGTA  299

seq1  GAGACATTTAGTTTTGAATGTCCGTATGTGAGAAACAGTGACTGGTAGCC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACATTTAGTTTTGAATGTCCGTATGTGAGAAACAGTGACTGGTAGCC  349

seq1  CTAGCTGACTCTCCATAAGCACAATTCCAGGGCAAATCAATAATTCTAGA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTGACTCTCCATAAGCACAATTCCAGGGCAAATCAATAATTCTAGA  399

seq1  GGTGCTTTTGTTAGGACAGGTGTGTACTCACTGGAAAGAAATGTAAATCA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTTTTGTTAGGACAGGTGTGTACTCACTGGAAAGAAATGTAAATCA  449

seq1  ATGAAGAGTAAAGCTGTAGGCAGAATGACAACTGCAATAAATAGATCTTT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGAGTAAAGCTGTAGGCAGAATGACAACTGCAATAAATAGATCTTT  499

seq1  AATCTCCTCTCTAATCAAAAAAAAAAAAAAACTCATCAATGGTGGCATCC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCCTCTCTAATCAAAAAAAAAAAAAAACTCATCAATGGTGGCATCC  549

seq1  CTTGATCATTCACATTTTGCTACAGATAAAAGTGACCAAAGTTGGCTTCT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATCATTCACATTTTGCTACAGATAAAAGTGACCAAAGTTGGCTTCT  599

seq1  GGGAAATTAAGCTCTTCTTACTTGACCTGAAGCCAATGAAATGTATTCCT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAATTAAGCTCTTCTTACTTGACCTGAAGCCAATGAAATGTATTCCT  649

seq1  TAATTCCAGTTTTACAGCCTGTGTTTTGCAAGCCTTGAATGTAAAAAATA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCCAGTTTTACAGCCTGTGTTTTGCAAGCCTTGAATGTAAAAAATA  699

seq1  AAATAGGAAAAGGAAAAGAAAAAGAAAAATCACTCAAAAGTAAGGGGGTT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGGAAAAGGAAAAGAAAAAGAAAAATCACTCAAAAGTAAGGGGGTT  749

seq1  TGTTCTTTTTATCTTATAAACAGATTTTTAAAATCCTTTTAGGTTTATTA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTTTTATCTTATAAACAGATTTTTAAAATCCTTTTAGGTTTATTA  799

seq1  TTTAGACTGGTGCTCATGCTGCATAATTTAATGATAGAGTTTACATTTTT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGACTGGTGCTCATGCTGCATAATTTAATGATAGAGTTTACATTTTT  849

seq1  ATAAAATACAAGTCATCTATTCTTTAAGAAGCACAGCAACTGCTGAGATT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATACAAGTCATCTATTCTTTAAGAAGCACAGCAACTGCTGAGATT  899

seq1  TCAAGCAATGAACAACAGCACTGGCTCTTACATAAGAGCAAGCTCCCTCT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCAATGAACAACAGCACTGGCTCTTACATAAGAGCAAGCTCCCTCT  949

seq1  TCAAATCTGAACAAGCAAATCCTACGAAGTGAAATGTTTTCCCAACCTGA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATCTGAACAAGCAAATCCTACGAAGTGAAATGTTTTCCCAACCTGA  999

seq1  TCTGGCCTGAATTC  1008
      ||||||||||||||
seq2  TCTGGCCTGAATTC  1013