BAC Information

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BAC

Clone NameB6Ng01-193L09
Chromosome19 (Build37)
Map Location 54,551,325 - 54,552,395
singlet/doubletsinglet
Overlap genenone
Upstream geneDusp5, LOC100043462, Smc3, Rbm20, LOC100042979, Pdcd4, 2310002J21Rik, Shoc2, Adra2a
Downstream geneLOC100043004, Gpam, Tectb, Gucy2g, Acsl5, Zdhhc6, Vti1a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-193L09.bB6Ng01-193L09.g
ACCGA016603GA016604
length1,080740
definitionB6Ng01-193L09.b B6Ng01-193L09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctagcagagggttaccttgtttgaaaactgctgtatcttacagaa
tgcaaaaagaacgtactttgaaaacaaagtgagaattcccatttagacat
ttgatttcagtgagtatgtccttcatactgggcgtcattgtattctgtgg
tgagtggaggaagcctagagtgcatgagttctgagggaatgtggctgtgt
gttgttgacatgggcacagctgtggcagggaagccaattcctcagaccca
tggaaaaatgacaaaaccttccagccgactgaggctcagagagatggcaa
aatgttcctctggtccatgtgtggatgtagacagtgtgtgcagaaaatgt
ccaccgcagctctctccttctctctaggtgtttatgatctgaagactgta
ctcctgacagagattactcttcccaacactagctaaacctgtgtccttga
tccagctctacataaaaacctcaactccttgtttatctgtttgcaataaa
cgtctaactgcatataataacatgctgagattctgggacactggtttctc
tatcagagagcacagtcaacccaaccgcagatttctatatggtctctgtt
agtgtttactcacgtcctcacctccacagtcacgtcaagtccctaggagc
tgagcaaggtctcagcagcatcaatcttattctccctggactgtgaatca
cactaaccaacactcactagaatgcttattcagcttaaatacaaacttta
ctgtcgtccatgacaatggccctggtatgtataatcagctttcacacgtc
atacagagtttatagtttaggaactcatgtccttattctcaatcaaacct
agaattctcccagttgggaaatgaggcaagagcccgagagagattgtgtc
agttaggaccctacttcactctccaattcagacacactgagtcatgctat
acatggggaaagaagagttggtagaggcaccagaaagctctttcatttgt
aacagtttgatacttgggacctcttagctttgggctatcggctttacatt
ttctacccagaaaactggaaaccttgaaaa
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgtagcccaaaa
cctaagatacccaagatataagatacaatttcctaaacacatgaaactca
agaaaaatgaagactgaagtgtgaacactatgcccttccttagaagtggg
aacaaaacacccttggaaggagttacagagacaaagtttggagctgagat
aaaaggatggaccatgtagacactagcatatccggggatccatcccataa
tcagcttccaaatgctgacaccattgcatacactagcaagattatgctga
aaggaccctgatatagctgtctcttgtcagagtatgcctgggcctagcaa
acatagaagtggatgctcacagtcggctattggatggatcacatggcccc
caatgaaggagctagagaaagtaccaaagaagctaaagggatctgcaacc
ctataggtggaacaacattatgaactaaccagtaccccggagctcttgac
tctagctgcatatgcatcaaaagatggcctagtcggccatcactggaaag
agaggcccattggacacgcaaactttatatgccccagtacaggggaacgc
cagggccataaaaaggggagtgggtgggtagggggagagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_54551325_54552395
seq2: B6Ng01-193L09.b_44_1123

seq1  GAATTCTAGCAGAGGGTTACCTTGTTTGAAAACTGCTGTATCTTACAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGCAGAGGGTTACCTTGTTTGAAAACTGCTGTATCTTACAGAA  50

seq1  TGCAAAAAGAACGTACTTTGAAAACAAAGTGAGAATTCCCATTTAGACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAAAGAACGTACTTTGAAAACAAAGTGAGAATTCCCATTTAGACAT  100

seq1  TTGATTTCAGTGAGTATGTCCTTCATACTGGGCGTCATTGTATTCTGTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTCAGTGAGTATGTCCTTCATACTGGGCGTCATTGTATTCTGTGG  150

seq1  TGAGTGGAGGAAGCCTAGAGTGCATGAGTTCTGAGGGAATGTGGCTGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGGAGGAAGCCTAGAGTGCATGAGTTCTGAGGGAATGTGGCTGTGT  200

seq1  GTTGTTGACATGGGCACAGCTGTGGCAGGGAAGCCAATTCCTCAGACCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTGACATGGGCACAGCTGTGGCAGGGAAGCCAATTCCTCAGACCCA  250

seq1  TGGAAAAATGACAAAACCTTCCAGCCGACTGAGGCTCAGAGAGATGGCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAATGACAAAACCTTCCAGCCGACTGAGGCTCAGAGAGATGGCAA  300

seq1  AATGTTCCTCTGGTCCATGTGTGGATGTAGACAGTGTGTGCAGAAAATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTCCTCTGGTCCATGTGTGGATGTAGACAGTGTGTGCAGAAAATGT  350

seq1  CCACCGCAGCTCTCTCCTTCTCTCTAGGTGTTTATGATCTGAAGACTGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCGCAGCTCTCTCCTTCTCTCTAGGTGTTTATGATCTGAAGACTGTA  400

seq1  CTCCTGACAGAGATTACTCTTCCCAACACTAGCTAAACCTGTGTCCTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGACAGAGATTACTCTTCCCAACACTAGCTAAACCTGTGTCCTTGA  450

seq1  TCCAGCTCTACATAAAAACCTCAACTCCTTGTTTATCTGTTTGCAATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCTCTACATAAAAACCTCAACTCCTTGTTTATCTGTTTGCAATAAA  500

seq1  CGTCTAACTGCATATAATAACATGCTGAGATTCTGGGACACTGGTTTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTAACTGCATATAATAACATGCTGAGATTCTGGGACACTGGTTTCTC  550

seq1  TATCAGAGAGCACAGTCAACCCAACCGCAGATTTCTATATGGTCTCTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGAGAGCACAGTCAACCCAACCGCAGATTTCTATATGGTCTCTGTT  600

seq1  AGTGTTTACTCACGTCCTCACCTCCACAGTCACGTCAAGTCCCTAGGAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTACTCACGTCCTCACCTCCACAGTCACGTCAAGTCCCTAGGAGC  650

seq1  TGAGCAAGGTCTCAGCAGCATCAATCTTATTCTCCCTGGACTGTGAATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAAGGTCTCAGCAGCATCAATCTTATTCTCCCTGGACTGTGAATCA  700

seq1  CACTAACCAACACTCACTAGAATGCTTATTCAGCTTAAATACAAACTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAACCAACACTCACTAGAATGCTTATTCAGCTTAAATACAAACTTTA  750

seq1  CTGTCGTCCATGACAATGGCCCTGGTATGTATAATCAGCTTTCACACGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCGTCCATGACAATGGCCCTGGTATGTATAATCAGCTTTCACACGTC  800

seq1  ATACAGAGTTTATAG-TTAGGAACTCATGTCCTTATTCTC-ATC-AACCT  847
      ||||||||||||||| |||||||||||||||||||||||| ||| |||||
seq2  ATACAGAGTTTATAGTTTAGGAACTCATGTCCTTATTCTCAATCAAACCT  850

seq1  AGAATTCTCCCAGT--GGGAATGAGGCAAGAGCCCGAGAGAGA-TGTGTC  894
      ||||||||||||||  || |||||||||||||||||||||||| ||||||
seq2  AGAATTCTCCCAGTTGGGAAATGAGGCAAGAGCCCGAGAGAGATTGTGTC  900

seq1  AGTTAGGACCCTAC-TCACTCTCCAAATTCAGACACACTGAGTCATGCTA  943
      |||||||||||||| ||||||||| |||||||||||||||||||||||||
seq2  AGTTAGGACCCTACTTCACTCTCC-AATTCAGACACACTGAGTCATGCTA  949

seq1  TACAT-GGGAAAGAAGAGTTGGTAGAGGCACCAGAAAGCTCTTTCATTTG  992
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGGGGAAAGAAGAGTTGGTAGAGGCACCAGAAAGCTCTTTCATTTG  999

seq1  TAACAGTTTGATACTTGGGACCTCTTAGCTTTTGGCTA-CGGCCTTACAT  1041
      |||||||||||||||||||||||||||||||| ||||| |||| ||||||
seq2  TAACAGTTTGATACTTGGGACCTCTTAGCTTTGGGCTATCGGCTTTACAT  1049

seq1  TTCCAACCCAAGAAACTGG-AACCCTGAAAA  1071
      || | |||||  ||||||| |||| ||||||
seq2  TTTCTACCCAGAAAACTGGAAACCTTGAAAA  1080