BAC Information

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BAC

Clone NameB6Ng01-194B15
Chromosome19 (Build37)
Map Location 55,674,398 - 55,869,321
singlet/doubletdoublet
Overlap geneVti1a, Tcf7l2
Upstream geneLOC100043004, Gpam, Tectb, Gucy2g, Acsl5, Zdhhc6, LOC100043479
Downstream genePpnr, LOC100043484, Habp2, Nrap, Casp7, 9930023K05Rik, Dclre1a, Nhlrc2, Adrb1, EG629643, A630007B06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-194B15.bB6Ng01-194B15.g
ACCGA016887GA016888
length1,197943
definitionB6Ng01-194B15.b B6Ng01-194B15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(55,868,111 - 55,869,321)(55,674,398 - 55,675,340)
sequence
gaattctccaaactcctgtagtaggtaccagccaactagaaaggaaaact
atgaaaatggagtcactgtagcctgtggatgtggtcagagtccatgggtc
ataggaccagcacccccacgtgaaaggtaaatggactcatgcctcatctt
taacagtctccttaattacctaaaagaagaatagcccgtgctccagagca
ggctgggaagtcctttcatctctccctcaaggctctccccagggagccgc
aacaggttttcttaaatgtatgaaaggttcggtccaggaatgctatcttt
aattcaccatcctctaaggagcgtgaaccgagaagcaaagcaaacttgac
aatggccctttacagctttaagcacagacgaaagtgaagaccctgccagc
caagtcacgtgggcacctggctggactgggaggagagcaatacctccccc
aggggagccactttcagggagcatttcctctgtgcccagggtgtgtcccc
agagtttaagagaatccctccctggaaattggcagcttgtatttcctaat
gagtttctacaaggtctggtctactggtggcaggagatgcctttcctaca
atggatatatgtactgaatgcagttgggtcttcagagccaaaatcatggc
tgacttgtgccaaccaaagaggtggtaaggattttcagggaccttacaga
gaaagcataggcttcccaaggccagttacaacattcatttggaaaagggg
gtgtcagtttgaaaacaggagactctgtgaacacacatgcagattcaggg
gagaagcaaccaaagagaagccagtgtccagagtcagctctcatcactgt
gggctgacatgtccacactccttgtcaggattctgcaattcaccaggccc
attggtcagcaagcatcagccacataagaataaacactgtgatatctggc
accccaaattatgagtccccagaggaggagggaaggaagcagttaccctg
tccccagggcaccaagtgttgcttttagctgatgcgttatagacaaagaa
ctacatcattccacctgtagttcctcagaagcgaggatttcaaacggact
gagctcattgaatcaagtgtctgatatagattgatagtccgtcccaaggt
agccatgaataaccagaacatgagaggtgttccgggaggagaatact
gaattcttttcttgccacagtccgttctgctttctgtgccttagcggtgg
gcccaggagcaccatattcgtcaccgactttcaagcaaccgagtgtcctc
cccgtttgtttggctcataaagtgccagagcagttgttcctccagttctc
tgtgcaactgtgatcctcggggccaggaggctgctcagccagcatgtccc
cgtgaggtcacagtgcacagtgaggcctggacagcctggggtcccgtgaa
tgtgcctgagtgctattcggttattctgtatctctgtcctcctgcgtcat
cttcagctccattgacaaaatgctccacttcccactctctgcctgcctct
aaagcaacggacaagcatcctattcttacacctccaggttacttgggtct
ctttgttgttattaattcacagagtcatgttacatacagaatatttggtc
acattcactgcctcccatcatcctcctggtctcctctcacctcttgctcc
caagaagatcctgtttggttttcgctctgtgtatatacatgggcatctct
gtccgcatttaattgatactactagcaggagcatgggcctgggttacttt
gttgaacgcgggcaacctaccaatagctatctatatacctgggggagact
cctcctccccagcaacctcactgtctatgtctcctaagggatggtgtggg
aacttgttagcactcctccatccaactgacggtagaacatctgcttcgta
cacagaaggcttcatccctagacaacagaaaagacaaactaggaggggtg
gaggtcatggaggaaggtgggagtatggaaaaccccacagctttcgcctg
tgaagatcactcctgtccattatcatactataggcttaaccgcaaatgta
accgctttatttagtcattttaaattataaaagtagatttggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_55868111_55869321
seq2: B6Ng01-194B15.b_45_1241 (reverse)

seq1  AGTATTTCTCCTCCCGGGAACACCTCTTCATGGTCTTTGGTGTAACTCCA  50
      |||| |||||||||| |||||||||| ||||| ||  |||| ||  | ||
seq2  AGTA-TTCTCCTCCC-GGAACACCTC-TCATGTTC--TGGT-TA--TTCA  42

seq1  T-GCTACCT--GGGCTG-CTATCATTCTATGTATTCAGACACTTGATTCA  96
      | |||||||  || | | |||||| |||||    ||||||||||||||||
seq2  TGGCTACCTTGGGACGGACTATCAATCTAT---ATCAGACACTTGATTCA  89

seq1  TTTAGCTCAGTCTGTTTGTAATCCTCGCCTTCTGAGAAACTACAGGTTGG  146
       | ||||||||| ||||| |||||||| |||||||| |||||||||| | 
seq2  ATGAGCTCAGTCCGTTTGAAATCCTCG-CTTCTGAGGAACTACAGGTGGA  138

seq1  ATG-TGTTGTTCTTTTGTTCTATAACGCATCCAGCCTAAAAGC-ACACTT  194
      ||| ||| |||||||   |||||||||||| ||| |||||||| ||||||
seq2  ATGATGTAGTTCTTT--GTCTATAACGCAT-CAG-CTAAAAGCAACACTT  184

seq1  GGTGGCCCTGGGGACAGGGTAACTGCTTTCCTTTCCCTCCTCCTCTGGGG  244
      ||| ||||||||||||||||||||||||  | ||||||||||||||||||
seq2  GGT-GCCCTGGGGACAGGGTAACTGCTT--CCTTCCCTCCTCCTCTGGGG  231

seq1  ACTCATAATTTGGGGTGCCAGATATCACAGTGTTTATTCTTATGTGGCTG  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATAATTTGGGGTGCCAGATATCACAGTGTTTATTCTTATGTGGCTG  281

seq1  ATGCTTGCTGACCAATGGGCCTGGTGAATTGCAGAATCCTGACAAGGAGT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTGCTGACCAATGGGCCTGGTGAATTGCAGAATCCTGACAAGGAGT  331

seq1  GTGGACATGTCAGCCCACAGTGATGAGAGCTGACTCTGGACACTGGCTTC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGACATGTCAGCCCACAGTGATGAGAGCTGACTCTGGACACTGGCTTC  381

seq1  TCTTTGGTTGCTTCTCCCCCTGAATCTGCATGTGTGTTCACAGAGTCTCC  444
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TCTTTGGTTGCTTCT-CCCCTGAATCTGCATGTGTGTTCACAGAGTCTCC  430

seq1  TGTTTTCAAACTGACACCCCCTTTTCCAAATGAATGTTGTAACTGGCCTT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCAAACTGACACCCCCTTTTCCAAATGAATGTTGTAACTGGCCTT  480

seq1  GGGAAGCCTATGCTTTCTCTGTAAGGTCCCTGAAAATCCTTACCACCTCT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGCCTATGCTTTCTCTGTAAGGTCCCTGAAAATCCTTACCACCTCT  530

seq1  TTGGTTGGCACAAGTCAGCCATGATTTTGGCTCTGAAGACCCAACTGCAT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTGGCACAAGTCAGCCATGATTTTGGCTCTGAAGACCCAACTGCAT  580

seq1  TCAGTACATATATCCATTGTAGGAAAGGCATCTCCTGCCACCAGTAGACC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTACATATATCCATTGTAGGAAAGGCATCTCCTGCCACCAGTAGACC  630

seq1  AGACCTTGTAGAAACTCATTAGGAAATACAAGCTGCCAATTTCCAGGGAG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTTGTAGAAACTCATTAGGAAATACAAGCTGCCAATTTCCAGGGAG  680

seq1  GGATTCTCTTAAACTCTGGGGACACACCCTGGGCACAGAGGAAATGCTCC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCTCTTAAACTCTGGGGACACACCCTGGGCACAGAGGAAATGCTCC  730

seq1  CTGAAAGTGGCTCCCCTGGGGGAGGTATTGCTCTCCTCCCAGTCCAGCCA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAGTGGCTCCCCTGGGGGAGGTATTGCTCTCCTCCCAGTCCAGCCA  780

seq1  GGTGCCCACGTGACTTGGCTGGCAGGGTCTTCACTTTCGTCTGTGCTTAA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCCCACGTGACTTGGCTGGCAGGGTCTTCACTTTCGTCTGTGCTTAA  830

seq1  AGCTGTAAAGGGCCATTGTCAAGTTTGCTTTGCTTCTCGGTTCACGCTCC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTAAAGGGCCATTGTCAAGTTTGCTTTGCTTCTCGGTTCACGCTCC  880

seq1  TTAGAGGATGGTGAATTAAAGATAGCATTCCTGGACCGAACCTTTCATAC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGGATGGTGAATTAAAGATAGCATTCCTGGACCGAACCTTTCATAC  930

seq1  ATTTAAGAAAACCTGTTGCGGCTCCCTGGGGAGAGCCTTGAGGGAGAGAT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAGAAAACCTGTTGCGGCTCCCTGGGGAGAGCCTTGAGGGAGAGAT  980

seq1  GAAAGGACTTCCCAGCCTGCTCTGGAGCACGGGCTATTCTTCTTTTAGGT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGACTTCCCAGCCTGCTCTGGAGCACGGGCTATTCTTCTTTTAGGT  1030

seq1  AATTAAGGAGACTGTTAAAGATGAGGCATGAGTCCATTTACCTTTCACGT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGGAGACTGTTAAAGATGAGGCATGAGTCCATTTACCTTTCACGT  1080

seq1  GGGGGTGCTGGTCCTATGACCCATGGACTCTGACCACATCCACAGGCTAC  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGTGCTGGTCCTATGACCCATGGACTCTGACCACATCCACAGGCTAC  1130

seq1  AGTGACTCCATTTTCATAGTTTTCCTTTCTAGTTGGCTGGTACCTACTAC  1194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACTCCATTTTCATAGTTTTCCTTTCTAGTTGGCTGGTACCTACTAC  1180

seq1  AGGAGTTTGGAGAATTC  1211
      |||||||||||||||||
seq2  AGGAGTTTGGAGAATTC  1197

seq1: chr19_55674398_55675340
seq2: B6Ng01-194B15.g_65_1007

seq1  GAATTCTTTTCTTGCCACAGTCCGTTCTGCTTTCTGTGCCTTAGCGGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTCTTGCCACAGTCCGTTCTGCTTTCTGTGCCTTAGCGGTGG  50

seq1  GCCCAGGAGCACCATATTCGTCACCGACTTTCAAGCAACCGAGTGTCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGGAGCACCATATTCGTCACCGACTTTCAAGCAACCGAGTGTCCTC  100

seq1  CCCGTTTGTTTGGCTCATAAAGTGCCAGAGCAGTTGTTCCTCCAGTTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTTTGTTTGGCTCATAAAGTGCCAGAGCAGTTGTTCCTCCAGTTCTC  150

seq1  TGTGCAACTGTGATCCTCGGGGCCAGGAGGCTGCTCAGCCAGCATGTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAACTGTGATCCTCGGGGCCAGGAGGCTGCTCAGCCAGCATGTCCC  200

seq1  CGTGAGGTCACAGTGCACAGTGAGGCCTGGACAGCCTGGGGTCCCGTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGAGGTCACAGTGCACAGTGAGGCCTGGACAGCCTGGGGTCCCGTGAA  250

seq1  TGTGCCTGAGTGCTATTCGGTTATTCTGTATCTCTGTCCTCCTGCGTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCTGAGTGCTATTCGGTTATTCTGTATCTCTGTCCTCCTGCGTCAT  300

seq1  CTTCAGCTCCATTGACAAAATGCTCCACTTCCCACTCTCTGCCTGCCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGCTCCATTGACAAAATGCTCCACTTCCCACTCTCTGCCTGCCTCT  350

seq1  AAAGCAACGGACAAGCATCCTATTCTTACACCTCCAGGTTACTTGGGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAACGGACAAGCATCCTATTCTTACACCTCCAGGTTACTTGGGTCT  400

seq1  CTTTGTTGTTATTAATTCACAGAGTCATGTTACATACAGAATATTTGGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTTGTTATTAATTCACAGAGTCATGTTACATACAGAATATTTGGTC  450

seq1  ACATTCACTGCCTCCCATCATCCTCCTGGTCTCCTCTCACCTCTTGCTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCACTGCCTCCCATCATCCTCCTGGTCTCCTCTCACCTCTTGCTCC  500

seq1  CAAGAAGATCCTGTTTGGTTTTCGCTCTGTGTATATACATGGGCATCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAGATCCTGTTTGGTTTTCGCTCTGTGTATATACATGGGCATCTCT  550

seq1  GTCCGCATTTAATTGATACTACTAGCAGGAGCATGGGCCTGGGTTACTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCGCATTTAATTGATACTACTAGCAGGAGCATGGGCCTGGGTTACTTT  600

seq1  GTTGAACGCGGGCAACCTACCAATAGCTATCTATATACCTGGGGGAGACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAACGCGGGCAACCTACCAATAGCTATCTATATACCTGGGGGAGACT  650

seq1  CCTCCTCCCCAGCAACCTCACTGTCTATGTCTCCTAAGGGATGGTGTGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCCCCAGCAACCTCACTGTCTATGTCTCCTAAGGGATGGTGTGGG  700

seq1  AACTTGTTAGCACTCCTCCATCCAACTGACGGTAGAACATCTGCTTCGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGTTAGCACTCCTCCATCCAACTGACGGTAGAACATCTGCTTCGTA  750

seq1  CACAGAAGGCTTCATCCCTAGACAACAGAAAAGACAAACTAGGAGGGGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAGGCTTCATCCCTAGACAACAGAAAAGACAAACTAGGAGGGGTG  800

seq1  GAGGTCATGGAGGAAGGTGGGAGTATGGAAAACCCCACAAGCTTTCGCCT  850
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GAGGTCATGGAGGAAGGTGGGAGTATGGAAAACCCCAC-AGCTTTCGCCT  849

seq1  GTGAAGATCACTCCTGT-CAATATCATACTATAAGCTTACACGCAAATGT  899
      ||||||||||||||||| || |||||||||||| |||||  |||||||||
seq2  GTGAAGATCACTCCTGTCCATTATCATACTATAGGCTTAACCGCAAATGT  899

seq1  AAACGC-TTATTAAGTCATTTTAAAATTATAAAAGTAGATTTGGT  943
      || ||| ||||| ||||||||| ||||||||||||||||||||||
seq2  AACCGCTTTATTTAGTCATTTT-AAATTATAAAAGTAGATTTGGT  943