BAC Information

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BAC

Clone NameB6Ng01-195M08
Chromosome19 (Build37)
Map Location 11,220,069 - 11,220,761
singlet/doubletsinglet
Overlap gene1700025F22Rik
Upstream geneLOC100040227, Fads1, Fen1, 1810006K21Rik, Gm98, Dagla, Syt7, Gm705, 4930579J09Rik, 0610038F07Rik, 5730453I16Rik, 2810441K11Rik, Tmem138, Cybasc3, Dak, Ddb1, Vwce, Pga5, 2210404E10Rik, Vps37c, Cd5, Cd6, Slc15a3, Tmem132a, Tmem109, Prpf19, Zp1, Gpr44, Ccdc86, Ms4a10, E530011F12Rik, 5033428B15Rik, AW112010, Ms4a8a, Gm336, LOC624395
Downstream geneMs4a13, Ms4a12, Ms4a1, Ms4a5, Gm1276, Ms4a7, Ms4a4a, LOC435588, Ms4a4c, LOC433221, Ms4a4b, Ms4a6c, EG666926, Ms4a6b, Ms4a4d, LOC100040454, Ms4a6d, Ms4a2, Ms4a3, Plac1l, Oosp1, Gm97, Gif, EG666958, Mrpl16, Stx3, Olfr1417, Olfr1418, Olfr1419, EG622845, EG666985, Olfr1420, AV312086, Osbp, GA_x5J8B7W6KF8-6942124-6941700, Olfr1422-ps1, Olfr1423, Olfr1424, Olfr1425, Olfr1426, Olfr1427, Olfr1428, Olfr76
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-195M08.bB6Ng01-195M08.g
ACCGA018096GA018097
length6931,181
definitionB6Ng01-195M08.b B6Ng01-195M08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggtcctttcgtttgcccagaaagtgagccgtatccctggccct
gctttcttagtttgaagtttaggtttggaaagctttaagaaatagtggtc
ctcctttctcactgaggcctgacaaggcagccctactaggcagtgctctt
tgttctaagaattaaagtaaattattgttataaaaaagaaataatgtttt
gatttgcatttctctgatgattaaggatgctgagcattttttcaggtgct
tctcagccatttggtattcctcaggtgagaattcttttttagctctgagc
cccattttttaatggggttatttgattttctggagtctaccttcttgagt
tctttatatatattggatattagtcccctatctgatttaagagatccatc
ccataattagcctccaaacgatgacaccattgcatacactagcaagattt
tgctgaaaggaccctgatatagctgtctcttgtgagactaggccggggcc
tagcaaacacctaagtagatgctcacagtcagctattggatggagcacag
ggcccctaatggaggagctagagaaagtatccaaggagctaaagagatct
gcaaccttgtaggtgcaacaacattatgaactaaccagtactctggagct
cttgactctagctgcatatgtatcaaaagatggcctagtcggc
gaattctcacctgaagaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agaagctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atttatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggattcccaagatataaggtacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtcgacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcataccctagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagcctatgccagggcctagcaaac
acagaagtggatgctcacagtcagctaatgggatggatcacagggctccc
aatggaggagctagagaaagaacccaaggagcttaagggatctgcaccta
taggtggaacaacattatggaactaccagtacccggatcttcttgacttc
tagctgcatatgtacaaagattgaccttattcgggccatcacttgtagga
agccaattggacacgtaacttgtatgtccagatacagtaccgccctaaga
ccaataaaggcctgacacttgtgggtgtggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_11220069_11220761
seq2: B6Ng01-195M08.b_41_733

seq1  GAATTCAGGTCCTTTCGTTTGCCCAGAAAGTGAGCCGTATCCCTGGCCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTCCTTTCGTTTGCCCAGAAAGTGAGCCGTATCCCTGGCCCT  50

seq1  GCTTTCTTAGTTTGAAGTTTAGGTTTGGAAAGCTTTAAGAAATAGTGGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCTTAGTTTGAAGTTTAGGTTTGGAAAGCTTTAAGAAATAGTGGTC  100

seq1  CTCCTTTCTCACTGAGGCCTGACAAGGCAGCCCTACTAGGCAGTGCTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTCTCACTGAGGCCTGACAAGGCAGCCCTACTAGGCAGTGCTCTT  150

seq1  TGTTCTAAGAATTAAAGTAAATTATTGTTATAAAAAAGAAATAATGTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTAAGAATTAAAGTAAATTATTGTTATAAAAAAGAAATAATGTTTT  200

seq1  GATTTGCATTTCTCTGATGATTAAGGATGCTGAGCATTTTTTCAGGTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGCATTTCTCTGATGATTAAGGATGCTGAGCATTTTTTCAGGTGCT  250

seq1  TCTCAGCCATTTGGTATTCCTCAGGTGAGAATTCTTTTTTAGCTCTGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGCCATTTGGTATTCCTCAGGTGAGAATTCTTTTTTAGCTCTGAGC  300

seq1  CCCATTTTTTAATGGGGTTATTTGATTTTCTGGAGTCTACCTTCTTGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTTTTTAATGGGGTTATTTGATTTTCTGGAGTCTACCTTCTTGAGT  350

seq1  TCTTTATATATATTGGATATTAGTCCCCTATCTGATTTAAGAGATCCATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATATATATTGGATATTAGTCCCCTATCTGATTTAAGAGATCCATC  400

seq1  CCATAATTAGCCTCCAAACGATGACACCATTGCATACACTAGCAAGATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAATTAGCCTCCAAACGATGACACCATTGCATACACTAGCAAGATTT  450

seq1  TGCTGAAAGGACCCTGATATAGCTGTCTCTTGTGAGACTAGGCCGGGGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAAAGGACCCTGATATAGCTGTCTCTTGTGAGACTAGGCCGGGGCC  500

seq1  TAGCAAACACCTAAGTAGATGCTCACAGTCAGCTATTGGATGGAGCACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAACACCTAAGTAGATGCTCACAGTCAGCTATTGGATGGAGCACAG  550

seq1  GGCCCCTAATGGAGGAGCTAGAGAAAGTATCCAAGGAGCTAAAGAGATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCCTAATGGAGGAGCTAGAGAAAGTATCCAAGGAGCTAAAGAGATCT  600

seq1  GCAACCTTGTAGGTGCAACAACATTATGAACTAACCAGTACTCTGGAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCTTGTAGGTGCAACAACATTATGAACTAACCAGTACTCTGGAGCT  650

seq1  CTTGACTCTAGCTGCATATGTATCAAAAGATGGCCTAGTCGGC  693
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACTCTAGCTGCATATGTATCAAAAGATGGCCTAGTCGGC  693