BAC Information

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BAC

Clone NameB6Ng01-196I04
Chromosome19 (Build37)
Map Location 32,069,845 - 32,099,174
singlet/doubletdoublet
Overlap geneAsah2
Upstream genePrkg1, Cstf2t, 8430431K14Rik, 1810073H04Rik
Downstream geneEG668042, Sgms1, 2700046G09Rik, LOC100042138, LOC672490, LOC100042823, Minpp1, Papss2, Atad1, Pten, B430203M17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-196I04.bB6Ng01-196I04.g
ACCGA018633GA018634
length1,0501,044
definitionB6Ng01-196I04.b B6Ng01-196I04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,069,845 - 32,070,909)(32,098,114 - 32,099,174)
sequence
gaattctttgggttagcgcctacaaatataacttcaaccacttctccctg
gaaataaaaacggcattgaattaagtctagattaagcctctctattcaga
ttggaagcactgtctgcgctatgttccaacaccctagatgctgtacacat
tccacactatttcattaagcgattccctctaagtttgttaagaattagat
ccaaagaatttgactttggcagtatactggctagttttgtgtcaacttga
cacagctggagttatcacagagaaaggagcttcagttgaggaaatgcctc
catgagatccagctgtaaggcattttctcaattagtgatcaagggggaaa
ggccccttgtgggtggtgccatctctgggctggtagtcttggttctataa
gagagcaggctgagcaagccaggggaagcaagccagtaaagaacatccct
ccatggcctctgcatcagctcctgcttcctgacctgcttgagttccagtc
ctgacttctttcagtgatgaacagcaatgtagaaatgtaagcttgcttct
tggtcatgatgtttgtgcaggaatagaaaccctgactaagacaggcagat
tctaacaaattaagatccagagctataattttcaatgtgacaacacgtga
aaatggcttcaacttatattgcagagagagccctgtcttaaaatagacac
atagaccacagaggaatcagaagtaaacacacacaactagagtcacccaa
tcattgacaaaggtgtcaacatattaactggagaaaaggcagcctcaaaa
gacctccaacagcacaggaaataatcccaaaactaacaaatgagattgca
ggaaattagaaagtttcttctgtacagcaaagaaaaccatccacagagta
aagaggcatttacagggatgcacaaatctttgccaactgtatagctatct
agtttcttttctatctatgataaaatatgggacagaaacagctaggagaa
agagctgctctgctcacaatcacctctgagtctaaagattatttcatttt

gaattcactggttgggagaaatggataagagtggttaagagtgggtaaat
ccagttctggagaacagaacttggttcttagcacctacaccaggaggctc
acaaccacctacaactccagttccaggggatctgacctcttctggccttt
atgggaaattcttgtgtagggtgttacccccccctacacccctacactat
ctaatctatcatctgtctgtctgtctatctatctatctatctatctatct
atctatctatctatctatctatccatctatcatctatttatcatctacct
acctacctaccttcctacctacttacacccagtatggaatgaaatgtttc
caataataaaggtataatttgctctgcacagcagatgtttcttatattga
aggcttcataaatttacaaccaattacataagaaagacttgttttatatt
tttggtagcatgtgatagtctttgatcaagtctttggtaatgtgatatac
tgcactgacattgacattcgttagtgctataagagtaatatgcaccttct
tagtggtgtaaaagcatgaatggagacagaccatgggaccttttttattg
attcaggatttcccaatgaaacattctttccaagggatcttgatctggta
tttttcaataaaacataaacggctggaaatgtgacccagcagttaagaac
actggttgttcttccaggggacccaggctcaattcacagaatccaggact
tcattttatagttgtctataactccagtcccagggaatccaatgttctct
tttggcctctacaggtaccacacatgcacatgcagacaaaacatcctata
tacattaaaaaaaatctaagccagcacaaccctaatctatgccatctgtg
acctgaaactactggtaatgaagatcagaaaaaggaaccaactgtctact
acagactctaactatggcactagtgactacagatagagtgacagatgctg
tctgcttggcactgttgcaagcatcaatgccagagattaagata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_32069845_32070909
seq2: B6Ng01-196I04.b_47_1096

seq1  GAATTCTTTGGGTTAGCGCCTACAAATATAACTTCAACCACTTCTCCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGGGTTAGCGCCTACAAATATAACTTCAACCACTTCTCCCTG  50

seq1  GAAATAAAAACGGCATTGAATTAAGTCTAGATTAAGCCTCTCTATTCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAAAAACGGCATTGAATTAAGTCTAGATTAAGCCTCTCTATTCAGA  100

seq1  TTGGAAGCACTGTCTGCGCTATGTTCCAACACCCTAGATGCTGTACACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAGCACTGTCTGCGCTATGTTCCAACACCCTAGATGCTGTACACAT  150

seq1  TCCACACTATTTCATTAAGCGATTCCCTCTAAGTTTGTTAAGAATTAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACACTATTTCATTAAGCGATTCCCTCTAAGTTTGTTAAGAATTAGAT  200

seq1  CCAAAGAATTTGACTTTGGCAGTATACTGGCTAGTTTTGTGTCAACTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGAATTTGACTTTGGCAGTATACTGGCTAGTTTTGTGTCAACTTGA  250

seq1  CACAGCTGGAGTTATCACAGAGAAAGGAGCTTCAGTTGAGGAAATGCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCTGGAGTTATCACAGAGAAAGGAGCTTCAGTTGAGGAAATGCCTC  300

seq1  CATGAGATCCAGCTGTAAGGCATTTTCTCAATTAGTGATCAAGGGGGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGATCCAGCTGTAAGGCATTTTCTCAATTAGTGATCAAGGGGGAAA  350

seq1  GGCCCCTTGTGGGTGGTGCCATCTCTGGGCTGGTAGTCTTGGTTCTATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCCTTGTGGGTGGTGCCATCTCTGGGCTGGTAGTCTTGGTTCTATAA  400

seq1  GAGAGCAGGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAAGAACATCCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCAGGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAAGAACATCCCT  450

seq1  CCATGGCCTCTGCATCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGCCTCTGCATCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAGTC  500

seq1  CTGACTTCTTTCAGTGATGAACAGCAATGTAGAAATGTAAGCTTGCTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTTCTTTCAGTGATGAACAGCAATGTAGAAATGTAAGCTTGCTTCT  550

seq1  TGGTCATGATGTTTGTGCAGGAATAGAAACCCTGACTAAGACAGGCAGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCATGATGTTTGTGCAGGAATAGAAACCCTGACTAAGACAGGCAGAT  600

seq1  TCTAACAAATTAAGATCCAGAGCTATAATTTTCAATGTGACAACACGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACAAATTAAGATCCAGAGCTATAATTTTCAATGTGACAACACGTGA  650

seq1  AAATGGCTTCAACTTATATTGCAGAGAGAGCCCTGTCTTAAAATAGACAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGCTTCAACTTATATTGCAGAGAGAGCCCTGTCTTAAAATAGACAC  700

seq1  ATAGACCACAGAGGAATCAGAAGTAAACACACACAACTAGAGTCACCCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACCACAGAGGAATCAGAAGTAAACACACACAACTAGAGTCACCCAA  750

seq1  TCATTGACAAAGGTGTCAACATATTAACTGGAGAAAAGGCAGCCTCAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGACAAAGGTGTCAACATATTAACTGGAGAAAAGGCAGCCTCAAAA  800

seq1  GACCTCCAACAGCACAGGAAATAATCCCAAAACTAACAAATGAGATTGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCCAACAGCACAGGAAATAATCCCAAAACTAACAAATGAGATTGCA  850

seq1  GGAAATTAGAAAGTTTCTTCTGTACAGCAAAGAAAACCATCCACAGAGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTAGAAAGTTTCTTCTGTACAGCAAAGAAAACCATCCACAGAGTA  900

seq1  AAGAGGCATTTACA-GGATGCAACAAATCTTTGCCAACTGTATAGCTATC  949
      |||||||||||||| |||||| ||||||||||||||||||||||||||||
seq2  AAGAGGCATTTACAGGGATGC-ACAAATCTTTGCCAACTGTATAGCTATC  949

seq1  TTAGTTTCTTTTCCTATTCCTATGATAAAATAATGGGACAGAAACAGCCT  999
       ||||||||||| ||||  |||||||||||| ||||||||||||||||  
seq2  -TAGTTTCTTTT-CTAT--CTATGATAAAAT-ATGGGACAGAAACAGC--  992

seq1  TAGGGAGAAAGAGCCTGCTCTGGCTCACAATTCACTCTGAGGTTCCTTAA  1049
      || |||||||||| ||||||| |||||||||   |||||||  ||  |||
seq2  TA-GGAGAAAGAG-CTGCTCT-GCTCACAATCACCTCTGAG--TC--TAA  1035

seq1  AGATTTATTTCATTTT  1065
      ||| ||||||||||||
seq2  AGA-TTATTTCATTTT  1050

seq1: chr19_32098114_32099174
seq2: B6Ng01-196I04.g_64_1107 (reverse)

seq1  TATCTTTATTTCTCTGCATCTGATGCTTGCAACCAGTGGCCAAGCAGAAC  50
      |||||| || |||  |||| |||||||||||| |||| ||||||||| ||
seq2  TATCTTAATCTCT-GGCAT-TGATGCTTGCAA-CAGT-GCCAAGCAG-AC  45

seq1  AGCATCTTGTCACTCTATCTGTAGTCACTAGTTGCCCATAGTTTAGGAGG  100
      |||||| |||||||||||||||||||||||||   ||||||||   ||| 
seq2  AGCATC-TGTCACTCTATCTGTAGTCACTAGT--GCCATAGTT--AGAG-  89

seq1  TTCCTGTAGTAGGACAGTTGGGTTCCTTTTTTCTGATC-TCATTACCAGG  149
         |||||||| ||||||| |||||| ||||||||||| |||||||||| 
seq2  --TCTGTAGTA-GACAGTT-GGTTCC-TTTTTCTGATCTTCATTACCAG-  133

seq1  TTAGTTTCAGGGTCACAGATGGCATAGATTAGGGTTGTTGCTGGCTTAGA  199
       |||||||| ||||||||||||||||||||||||||| ||||||||||||
seq2  -TAGTTTCA-GGTCACAGATGGCATAGATTAGGGTTG-TGCTGGCTTAGA  180

seq1  TTTTTTTTTAATGTATAT-GGGTGTTTTGTCTGCATGTGCATGTGTGGTA  248
       ||||||||||||||||| || ||||||||||||||||||||||||||||
seq2  -TTTTTTTTAATGTATATAGGATGTTTTGTCTGCATGTGCATGTGTGGTA  229

seq1  CCTGTAGAGGCCAAAAGAGAACATTGGATTCCCTGGGACTGGAGTTATAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTAGAGGCCAAAAGAGAACATTGGATTCCCTGGGACTGGAGTTATAG  279

seq1  ACAACTATAAAATGAAGT-CTGGATTCTGTGAATTGAGCCTGGGTCCCCT  347
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ACAACTATAAAATGAAGTCCTGGATTCTGTGAATTGAGCCTGGGTCCCCT  329

seq1  GGAAGAACAACCAGTGTTCTTAACTGCTGGGTCACATTTCCAGCCGTTTA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAACAACCAGTGTTCTTAACTGCTGGGTCACATTTCCAGCCGTTTA  379

seq1  TGTTTTATTGGAAAAATACCAGATCAAGAT-CCTTGGAAAGAATGTTTCA  446
      ||||||||| |||||||||||||||||||| |||||||||||||||||||
seq2  TGTTTTATT-GAAAAATACCAGATCAAGATCCCTTGGAAAGAATGTTTCA  428

seq1  TTGGGAAATCCTGAATCAAT-AAAAAGGTCCCATGGTCTGTCTCCATTCA  495
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTGGGAAATCCTGAATCAATAAAAAAGGTCCCATGGTCTGTCTCCATTCA  478

seq1  TGCTTTTACACCACTAAGAAGGTGCATATTACTCTTATAGCACTAACGAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTACACCACTAAGAAGGTGCATATTACTCTTATAGCACTAACGAA  528

seq1  TGTCAATGTCAGTGCAGTATATCACATTACCAAAGACTTGATCAAAGACT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAATGTCAGTGCAGTATATCACATTACCAAAGACTTGATCAAAGACT  578

seq1  ATCACATGCTACCAAAAATATAAAACAAGTCTTTCTTATGTAATTGGTTG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACATGCTACCAAAAATATAAAACAAGTCTTTCTTATGTAATTGGTTG  628

seq1  TAAATTTATGAAGCCTTCAATATAAGAAACATCTGCTGTGCAGAGCAAAT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTATGAAGCCTTCAATATAAGAAACATCTGCTGTGCAGAGCAAAT  678

seq1  TATACCTTTATTATTGGAAACATTTCATTCCATACTGGGTGTAAGTAGGT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCTTTATTATTGGAAACATTTCATTCCATACTGGGTGTAAGTAGGT  728

seq1  AGGAAGGTAGGTAGGTAGGTAGATGATAAATAGATGATAGATGGATAGAT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGTAGGTAGGTAGGTAGATGATAAATAGATGATAGATGGATAGAT  778

seq1  AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGACAGACAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGACAGACAG  828

seq1  ACAGATGATAGATTAGATAGTGTAGGGGTGTAGGGGGGGGTAACACCCTA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATGATAGATTAGATAGTGTAGGGGTGTAGGGGGGGGTAACACCCTA  878

seq1  CACAAGAATTTCCCATAAAGGCCAGAAGAGGTCAGATCCCCTGGAACTGG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGAATTTCCCATAAAGGCCAGAAGAGGTCAGATCCCCTGGAACTGG  928

seq1  AGTTGTAGGTGGTTGTGAGCCTCCTGGTGTAGGTGCTAAGAACCAAGTTC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTAGGTGGTTGTGAGCCTCCTGGTGTAGGTGCTAAGAACCAAGTTC  978

seq1  TGTTCTCCAGAACTGGATTTACCCACTCTTAACCACTCTTATCCATTTCT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTCCAGAACTGGATTTACCCACTCTTAACCACTCTTATCCATTTCT  1028

seq1  CCCAACCAGTGAATTC  1061
      ||||||||||||||||
seq2  CCCAACCAGTGAATTC  1044