BAC Information

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BAC

Clone NameB6Ng01-197O06
Chromosome19 (Build37)
Map Location 12,784,140 - 12,909,131
singlet/doubletdoublet
Overlap geneKeg1, Zfp91, Cntf, Lpxn
Upstream geneGm97, Gif, EG666958, Mrpl16, Stx3, Olfr1417, Olfr1418, Olfr1419, EG622845, EG666985, Olfr1420, AV312086, Osbp, GA_x5J8B7W6KF8-6942124-6941700, Olfr1422-ps1, Olfr1423, Olfr1424, Olfr1425, Olfr1426, Olfr1427, Olfr1428, Olfr76, Olfr1555-ps1, Olfr1430-ps1, Olfr1431, Olfr1429-ps1, Olfr262, Olfr232, Olfr1433, Olfr1435-ps1, Olfr1436, Olfr1437, Olfr1438-ps1, Olfr1439-ps1, Olfr1440, Olfr1441, Pfpl, Mpeg1, Dtx4, EG625046, 4632417K18Rik, EG240549, Glyat, Olfr1442, Olfr1443
Downstream geneEG383436, Olfr1444, Olfr1445, Olfr1446, Olfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451, Olfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1, Olfr1457, EG667271, Olfr1459, Olfr1460-ps1, Olfr1461, Olfr1462, Olfr1463, LOC667300, Olfr1465, Olfr1466, Olfr1467, Olfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472, Olfr1473-ps1, Olfr1474, Olfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655, Olfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653, Olfr1487, GA_x5J8B7W6KF8-5425983-5425664, Olfr1489, Olfr1490, Olfr1491, Olfr1492-ps1, Olfr1493-ps1, Olfr1494, Olfr1495, Olfr1496, Olfr1497, Olfr1498-ps1, Olfr1499, Olfr1500
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-197O06.bB6Ng01-197O06.g
ACCGA019634GA019635
length1,1611,123
definitionB6Ng01-197O06.b B6Ng01-197O06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,784,140 - 12,785,329)(12,908,008 - 12,909,131)
sequence
gaattccctaaggaagcacctccctgagtccttaaaggtgaaattagtac
attctcagagtaactaaggactgcaccttgctatggcagaggaaggaaga
ggtcaagactcattggaaactgattgacatcatggcatctctctcacctg
tgctatttccccccccccccccccccgccgagcagaaagaagactcaata
atgtcatttgcttagtattttaaaggagcagagtgctgctctccactgtc
taaaacacatcactgttcatttcccatggatgttttacaattttgtgaga
ctctatcacaaaataaaaactcaaaagaaagttggaaattttatagttca
gtgatagagtgtttgcctcgcatgtggaaggtcttagatttaattgccag
tagggacaagaacttttctgattcttaacagacagatcactatctagttg
gagccatattagatatcagtaataatgattctgatcttacttaaattttg
ctctcattgtgttcctgacatggctctagcagggaaagattttaaattaa
aatgtatatcatcagatgctttttcatagcacatattaattcaatgaaat
aagatttaatgtacaagaatttccagatctcgttatatgtaacacacaac
ttgttttggatgttactgtgaactaggatttgacatatcacatcttccca
gaagagatgataaaatatacatatggcattgaagccacattttataagtt
ggcctgtggctcacttcataccccaggtgtcccttacatattcaacttct
tcatccctattagctgaggtaacagacctgcatcactaagcctgggctaa
atccttagctgagatgaaaaaattttgttagatgataaacagatatcaac
agccagataatgcagatataagaattatatgatatggatattaaagcagc
aatcatagaatgcttcaaggagtaatggcaaaaacacttgtatgaaaaga
atttatttctcagtgcccagctttgtaattcatggaatgcatcaaagaag
aaattctgaatcatgaaaaaatctattagattctgcatagagagtcatgt
ttatttataatttgatatcttattttatcttataattcagatttgttcga
tagcaactagt
gaattcttttccaagaatcacttcatccattctaattctctaagaagtac
tattttcatgccaatctaaaaataatgcatcagtcctattttaaaggatc
accttccagtgaaggggtttttgcctttaaactcggaatctaggattgta
aaagtctcttttttgctatataaaaataaacatgtgattatttttaagat
tgtagaaagaaaataaagtatgtccatgcctgcccaatgagtgccttact
tatgctctatgtacagcctacttcataaacaaaccaataggatataagac
agtcaaagtcttcagtaacgtgtaaagttttctataaattaatgtatttt
gaaagaacaagtgtttgtgacttggcttccctgtccaaactaaatgacca
tcacttcatcttttctaacatctttcctcaaagaagctgtgcacagattt
tggtcatttctctccatgaggcagttttgagtttgaaggagacacatcct
tcattctttacttttaaaatgcatttgtaaggtatttaatgtacagccag
acctttttccataaagaaaatgatgaaaacaaattctaaaagccttgcta
gcttctaatgatccaaagatttacctctgaaaaataaaatggctaaagac
tcagactaacaggaagagttataagcaatgggtcttgtctgttagtgtct
gctgattgggggagggcagtatctgctatatgcaaggaaagaagagacag
attacactgcagctgcaagtagtggctgatcttctctaacgtgggagcag
aacatttatctaccacatgaacatgacagtgagtcaccaaaaccacaagc
tgctttattcatcacatgtgtcagtaaaaatacacttccgcttaaaaagc
aaatgcagagacactaagggtttaagactattgcgtgacccctgacagca
aagagagagtaaaaccctggtggtccacatctgagatttgaatggagcat
cagcagagtcaaggtgagaaagagaaaaccagcagtgtaaagactgtgca
cattaagaaaatattacccttcagaggctctgatagcatgaatctaaatc
taatatttattattaaagtaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_12784140_12785329
seq2: B6Ng01-197O06.b_46_1206

seq1  GAATTCCCTAAGGAAGCACCTCCCTGAGTCCTTAAAGGTGAAATTAGTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTAAGGAAGCACCTCCCTGAGTCCTTAAAGGTGAAATTAGTAC  50

seq1  ATTCTCAGAGTAACTAAGGACTGCACCTTGCTATGGCAGAGGAAGGAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCAGAGTAACTAAGGACTGCACCTTGCTATGGCAGAGGAAGGAAGA  100

seq1  GGTCAAGACTCATTGGAAACTGATTGACATCATGGCATCTCTCTCACCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAAGACTCATTGGAAACTGATTGACATCATGGCATCTCTCTCACCTG  150

seq1  TGCTATTT-CCCCCCCCCCCCCCCCCGCCGAGCAGAAAGAAGACTCAATA  199
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATTTCCCCCCCCCCCCCCCCCCGCCGAGCAGAAAGAAGACTCAATA  200

seq1  ATGTCATTTGCTTAGTATTTTAAAGGAGCAGAGTGCTGCTCTCCACTGTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCATTTGCTTAGTATTTTAAAGGAGCAGAGTGCTGCTCTCCACTGTC  250

seq1  TAAAACACATCACTGTTCATTTCCCATGGATGTTTTACAATTTTGTGAGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACACATCACTGTTCATTTCCCATGGATGTTTTACAATTTTGTGAGA  300

seq1  CTCTATCACAAAATAAAAACTCAAAAGAAAGTTGGAAATTTTATAGTTCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATCACAAAATAAAAACTCAAAAGAAAGTTGGAAATTTTATAGTTCA  350

seq1  GTGATAGAGTGTTTGCCTCGCATGTGGAAGGTCTTAGATTTAATTGCCAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATAGAGTGTTTGCCTCGCATGTGGAAGGTCTTAGATTTAATTGCCAG  400

seq1  TAGGGACAAGAACTTTTCTGATTCTTAACAGACAGATCACTATCTAGTTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGACAAGAACTTTTCTGATTCTTAACAGACAGATCACTATCTAGTTG  450

seq1  GAGCCATATTAGATATCAGTAATAATGATTCTGATCTTACTTAAATTTTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCATATTAGATATCAGTAATAATGATTCTGATCTTACTTAAATTTTG  500

seq1  CTCTCATTGTGTTCCTGACATGGCTCTAGCAGGGAAAGATTTTAAATTAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCATTGTGTTCCTGACATGGCTCTAGCAGGGAAAGATTTTAAATTAA  550

seq1  AATGTATATCATCAGATGCTTTTTCATAGCACATATTAATTCAATGAAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTATATCATCAGATGCTTTTTCATAGCACATATTAATTCAATGAAAT  600

seq1  AAGATTTAATGTACAAGAATTTCCAGATCTCGTTATATGTAACACACAAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTAATGTACAAGAATTTCCAGATCTCGTTATATGTAACACACAAC  650

seq1  TTGTTTTGGATGTTACTGTGAACTAGGATTTGACATATCACATCTTCCCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTGGATGTTACTGTGAACTAGGATTTGACATATCACATCTTCCCA  700

seq1  GAAGAGATGATAAAATATACATATGGCATTGAAGCCACATTTTATAAGTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGATGATAAAATATACATATGGCATTGAAGCCACATTTTATAAGTT  750

seq1  GGCCTGTGGCTCACTTCATACCCCAGGTGTCCCTTACATATTCAACTTCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGTGGCTCACTTCATACCCCAGGTGTCCCTTACATATTCAACTTCT  800

seq1  TCATCCCTATTAGCTGAGGTAACAGACCTGCATCACTAAGCCT-GGCTAA  848
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TCATCCCTATTAGCTGAGGTAACAGACCTGCATCACTAAGCCTGGGCTAA  850

seq1  AT-CTTAGCTGAGATGAAAAAATTTTGTTAGATGATAAACAGATATCAAC  897
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTAGCTGAGATGAAAAAATTTTGTTAGATGATAAACAGATATCAAC  900

seq1  AGCCAGATAATGCAGATATAAGAATTATATGATATGGATATTAAAGCAGC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGATAATGCAGATATAAGAATTATATGATATGGATATTAAAGCAGC  950

seq1  AATCATAGAAATGCTTCAAGGAGTAATGGCAAAAACACTTGTAATGAAAA  997
      |||||||| ||||||||||||||||||||||||||||||||| |||||||
seq2  AATCATAG-AATGCTTCAAGGAGTAATGGCAAAAACACTTGT-ATGAAAA  998

seq1  GAATTTATTTCTCAAGTGGCCCAGCTTTGTAAAATTCATTGGATGCATCA  1047
      ||||||||||||| ||| ||||||||||||  ||||||| | ||||||| 
seq2  GAATTTATTTCTC-AGT-GCCCAGCTTTGT--AATTCATGGAATGCATC-  1043

seq1  AAAGAAAGAAATCTGAAATCCATGAAAAAAATCTATTAGATTCTGCAATA  1097
      ||||||  || ||||||   |||| ||||||||||||||||||||| |||
seq2  AAAGAAGAAATTCTGAA--TCATG-AAAAAATCTATTAGATTCTGC-ATA  1089

seq1  GGAGAGTCCATTGGTTTATTTATAAATTGTATAATTCTTTATATTTTATC  1147
       |||||| |||  |||||||||||| ||| |||  |||   |||||||||
seq2  -GAGAGT-CAT--GTTTATTTATAATTTG-ATA--TCT---TATTTTATC  1129

seq1  TTAATAATATTTAAAAGATATTTTGTTAGAATAAGCAACTAGT  1190
      ||    ||| || | |     |||||| ||   ||||||||||
seq2  TT----ATAATTCAGA-----TTTGTTCGA--TAGCAACTAGT  1161

seq1: chr19_12908008_12909131
seq2: B6Ng01-197O06.g_66_1188 (reverse)

seq1  CATTACTTTTTAATTATATAT-TTAGATTTAGA-TCATGCTATCAAGAGC  48
      ||||||  |||||| ||| || ||||||||||| |||||||||| |||||
seq2  CATTAC--TTTAATAATAAATATTAGATTTAGATTCATGCTATC-AGAGC  47

seq1  CTCTGAAGG--TATA-TTTCTT-ATGTGCACAGTTCTTTCCACTGCTGGT  94
      |||||||||   ||| |||||| |||||||||| ||||| ||||||||||
seq2  CTCTGAAGGGTAATATTTTCTTAATGTGCACAG-TCTTTACACTGCTGGT  96

seq1  TTTCTCTTTCTCACCTTTGACCTCTGCTGATGCTCCATTCAAATCTTCAG  144
      ||||||||||||||| |||| |||||||||||||||||||||||| ||||
seq2  TTTCTCTTTCTCACC-TTGA-CTCTGCTGATGCTCCATTCAAATC-TCAG  143

seq1  ATGTGGGCCA-CAGGGTTTTACTCTCTCTTTGCTGTCAGGGGTCACGCAA  193
      |||||| ||| |||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGACCACCAGGGTTTTACTCTCTCTTTGCTGTCAGGGGTCACGCAA  193

seq1  TAGTCTTAAACCCTTAGTGTCTCTGCATTTTGCTTTTTAAGCGGAAGTGT  243
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TAGTCTTAAACCCTTAGTGTCTCTGCA-TTTGCTTTTTAAGCGGAAGTGT  242

seq1  ATTTTTACTGACACATGTGATGAATAAAGCAGCTTGTGGTTTTGGTGACT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTACTGACACATGTGATGAATAAAGCAGCTTGTGGTTTTGGTGACT  292

seq1  CACTGTCATGTTCATGTGGTAGATAAATGTTCTGCTCCCACGTTAGAGAA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTCATGTTCATGTGGTAGATAAATGTTCTGCTCCCACGTTAGAGAA  342

seq1  GATCAGCCACTACTTGCAGCTGCAGTGTAATCTGTCTCTTCTTTCCTTGC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGCCACTACTTGCAGCTGCAGTGTAATCTGTCTCTTCTTTCCTTGC  392

seq1  ATATAGCAGATACTGCCCTCCCCCAATCAGCAGACACTAACAGACAAGAC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGCAGATACTGCCCTCCCCCAATCAGCAGACACTAACAGACAAGAC  442

seq1  CCATTGCTTATAACTCTTCCTGTTAGTCTGAGTCTTTAGCCATTTTATTT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGCTTATAACTCTTCCTGTTAGTCTGAGTCTTTAGCCATTTTATTT  492

seq1  TTCAGAGGTAAATCTTTGGATCATTAGAAGCTAGCAAGGCTTTTAGAATT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAGGTAAATCTTTGGATCATTAGAAGCTAGCAAGGCTTTTAGAATT  542

seq1  TGTTTTCATCATTTTCTTTATGGAAAAAGGTCTGGCTGTACATTAAATAC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCATCATTTTCTTTATGGAAAAAGGTCTGGCTGTACATTAAATAC  592

seq1  CTTACAAATGCATTTTAAAAGTAAAGAATGAAGGATGTGTCTCCTTCAAA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAAATGCATTTTAAAAGTAAAGAATGAAGGATGTGTCTCCTTCAAA  642

seq1  CTCAAAACTGCCTCATGGAGAGAAATGACCAAAATCTGTGCACAGCTTCT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAACTGCCTCATGGAGAGAAATGACCAAAATCTGTGCACAGCTTCT  692

seq1  TTGAGGAAAGATGTTAGAAAAGATGAAGTGATGGTCATTTAGTTTGGACA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGAAAGATGTTAGAAAAGATGAAGTGATGGTCATTTAGTTTGGACA  742

seq1  GGGAAGCCAAGTCACAAACACTTGTTCTTTCAAAATACATTAATTTATAG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGCCAAGTCACAAACACTTGTTCTTTCAAAATACATTAATTTATAG  792

seq1  AAAACTTTACACGTTACTGAAGACTTTGACTGTCTTATATCCTATTGGTT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTTACACGTTACTGAAGACTTTGACTGTCTTATATCCTATTGGTT  842

seq1  TGTTTATGAAGTAGGCTGTACATAGAGCATAAGTAAGGCACTCATTGGGC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATGAAGTAGGCTGTACATAGAGCATAAGTAAGGCACTCATTGGGC  892

seq1  AGGCATGGACATACTTTATTTTCTTTCTACAATCTTAAAAATAATCACAT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATGGACATACTTTATTTTCTTTCTACAATCTTAAAAATAATCACAT  942

seq1  GTTTATTTTTATATAGCAAAAAAGAGACTTTTACAATCCTAGATTCCGAG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTTTTATATAGCAAAAAAGAGACTTTTACAATCCTAGATTCCGAG  992

seq1  TTTAAAGGCAAAAACCCCTTCACTGGAAGGTGATCCTTTAAAATAGGACT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGGCAAAAACCCCTTCACTGGAAGGTGATCCTTTAAAATAGGACT  1042

seq1  GATGCATTATTTTTAGATTGGCATGAAAATAGTACTTCTTAGAGAATTAG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCATTATTTTTAGATTGGCATGAAAATAGTACTTCTTAGAGAATTAG  1092

seq1  AATGGATGAAGTGATTCTTGGAAAAGAATTC  1124
      |||||||||||||||||||||||||||||||
seq2  AATGGATGAAGTGATTCTTGGAAAAGAATTC  1123