BAC Information

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BAC

Clone NameB6Ng01-197O08
Chromosome19 (Build37)
Map Location 51,935,558 - 51,936,645
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042924, LOC100042928, LOC668536
Downstream geneLOC100042936, Ins1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-197O08.bB6Ng01-197O08.g
ACCGA019638GA019639
length1,0891,118
definitionB6Ng01-197O08.b B6Ng01-197O08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ggaattctgtttagatctgtatcctagtttttttattttaaattatttgg
tttgttgatgtctcgtttctttactttttaaaatatattttggaagttag
tcctgtattagctgtggaattggtgaacacattttcccattgtgactttg
ttttcaagttctgtaaagaattttgttatagtgcttttataggagtggtg
ggatatattcattttattgcttgcattatttgatgaatgagaagtaatat
attatcatcaaaaaataaacaaacaagaacaaacgtgtgtagaggccagt
gcaaaacatgagttaagtcccttcaacaggcttttcttcagcaattgtaa
ataaaccatcaaatttccaccttcaccctgaaacctttgaaggactaaaa
gaatagctccaccccatggcctcatgaaatggagacattcaaaagaaaat
tatctgtgtaagttttacaaagaatcaccattttaataattaaaagtttg
ctgtgcaagctattaacttttgattttcagggatgcactacacaccatgc
tctttgttctttctacagctggaaagagtatgctacttcaactttctctt
actgacgcgaataacatcaccaattttataattagatttattgtattttt
aatacagtgtatgtttatccatgtttgaatgtgtacatgagtgcaggtgc
cagtaaaagtcagaggaaggcctcagttgccctagacctagactctttga
gcctcacatcatgaggaatggactttcagaagcactaagcattattaact
actgagccatatctccatgtccctatcctggatctttttaaagatttatt
ttctttaggtttgcactcatttgttcagttattttactcatgcgtttatt
tacttatataaataagcttcttttgtgactggatattactaatgagaacc
cgatactatgaaaggttaacatcaagacaagtgcagttgacagtataaaa
ccaacggagagctttctgccttatttgctctcccattctcctaattatgt
tagtagtacactaaaaacaattccatgtctaaagacagc

gaattccaggcaatactgagatagccaaggttgtctcttttgctgtagcc
agacttggtaataagaatcacccaggaggtaatggttttgaaggtatgaa
taggtcatggagagcagctgaggtttggacttgtgagaggctagggaagg
ctactggtgaaggtgcaacctcagtttcaattgatagcccagaacggaag
tggtcattcaaataatttgaggcttggcaccatgaagggagcctatcaaa
ggctattggtgaagcctagttgcagtggaagactccggcacattggagat
accaatactgagagataatcaccaagaatggcagcagcagtgaagtagtc
agccagattctagagtactacagaggacagagctggagaatcattggagg
attattttctggatcccagacattggtacaagaggctgtgaagttgaagt
tgtcttggagaccctaggatattagagatgccaaagtcatgggatacctg
ctgagaaatgttgctatcaggaaggggaataagcccaagagacataaatg
tttcagtcatcaatactgaaagaagttggacatcagacatagagttgcag
agtatagagtttgttggcttttggacttcctttgacccagcattttctca
ctatgatgctttggattggtactgtagatccagtaatgttggaggtaaat
gatcttctttttgatgttgattgtatagggaattaccgttaaatgataag
atggatcttagaaaagactttgaactttggacttgtaacattgttgagac
ttttacaggctatgggactttttgaatttggactaaaaatatttttgcat
ttatggtctgcctgggtatggccctcatagactcatgtgtttgaataagc
ctatgtgggctaccgagtagaatgtgggtggtttgaattatgtttagctc
aggaattggcagttatttaaggaggtctctggcccttgtcagagtaggtt
gttggcccttttaaggagtgttactgttaggcatggggatttaataccct
tgtcctagctgccttggaatgcatttggctctggatggccattggtctcc
aaagaagtgtagaaaact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_51935558_51936645
seq2: B6Ng01-197O08.b_43_1130

seq1  GAATTCTGTTTAGATCTGTATCCTAGTTTTTTTATTTTAAATTATTTGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTTAGATCTGTATCCTAGTTTTTTTATTTTAAATTATTTGGT  50

seq1  TTGTTGATGTCTCGTTTCTTTACTTTTTAAAATATATTTTGGAAGTTAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGATGTCTCGTTTCTTTACTTTTTAAAATATATTTTGGAAGTTAGT  100

seq1  CCTGTATTAGCTGTGGAATTGGTGAACACATTTTCCCATTGTGACTTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTATTAGCTGTGGAATTGGTGAACACATTTTCCCATTGTGACTTTGT  150

seq1  TTTCAAGTTCTGTAAAGAATTTTGTTATAGTGCTTTTATAGGAGTGGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAGTTCTGTAAAGAATTTTGTTATAGTGCTTTTATAGGAGTGGTGG  200

seq1  GATATATTCATTTTATTGCTTGCATTATTTGATGAATGAGAAGTAATATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATATTCATTTTATTGCTTGCATTATTTGATGAATGAGAAGTAATATA  250

seq1  TTATCATCAAAAAATAAACAAACAAGAACAAACGTGTGTAGAGGCCAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCATCAAAAAATAAACAAACAAGAACAAACGTGTGTAGAGGCCAGTG  300

seq1  CAAAACATGAGTTAAGTCCCTTCAACAGGCTTTTCTTCAGCAATTGTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACATGAGTTAAGTCCCTTCAACAGGCTTTTCTTCAGCAATTGTAAA  350

seq1  TAAACCATCAAATTTCCACCTTCACCCTGAAACCTTTGAAGGACTAAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCATCAAATTTCCACCTTCACCCTGAAACCTTTGAAGGACTAAAAG  400

seq1  AATAGCTCCACCCCATGGCCTCATGAAATGGAGACATTCAAAAGAAAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCTCCACCCCATGGCCTCATGAAATGGAGACATTCAAAAGAAAATT  450

seq1  ATCTGTGTAAGTTTTACAAAGAATCACCATTTTAATAATTAAAAGTTTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTGTAAGTTTTACAAAGAATCACCATTTTAATAATTAAAAGTTTGC  500

seq1  TGTGCAAGCTATTAACTTTTGATTTTCAGGGATGCACTACACACCATGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAAGCTATTAACTTTTGATTTTCAGGGATGCACTACACACCATGCT  550

seq1  CTTTGTTCTTTCTACAGCTGGAAAGAGTATGCTACTTCAACTTTCTCTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTTCTTTCTACAGCTGGAAAGAGTATGCTACTTCAACTTTCTCTTA  600

seq1  CTGACGCGAATAACATCACCAATTTTATAATTAGATTTATTGTATTTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACGCGAATAACATCACCAATTTTATAATTAGATTTATTGTATTTTTA  650

seq1  ATACAGTGTATGTTTATCCATGTTTGAATGTGTACATGAGTGCAGGTGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGTGTATGTTTATCCATGTTTGAATGTGTACATGAGTGCAGGTGCC  700

seq1  AGTAAAAGTCAGAGGAAGGCCTCAGTTGCCCTAGACCTAGACTCTTTGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAAGTCAGAGGAAGGCCTCAGTTGCCCTAGACCTAGACTCTTTGAG  750

seq1  CCTCACATCATGAGGAATGGACTTTCAGAAGCACTAAGCATTATTAACTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACATCATGAGGAATGGACTTTCAGAAGCACTAAGCATTATTAACTA  800

seq1  CTGAGCCATATCTCCATGTCCCTATCCTGGATC-TTTTAAAGATTTATTT  849
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CTGAGCCATATCTCCATGTCCCTATCCTGGATCTTTTTAAAGATTTATTT  850

seq1  TCTTTAGGTTTGCACTCATTTGTTCAGTTA-TTTACTCATGCGTTTATTT  898
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TCTTTAGGTTTGCACTCATTTGTTCAGTTATTTTACTCATGCGTTTATTT  900

seq1  ACTTATATAAATAAGCTTC-TTTGTGACTGGATATTACTAATGAGAACCC  947
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ACTTATATAAATAAGCTTCTTTTGTGACTGGATATTACTAATGAGAACCC  950

seq1  GATACTATGAAAGGTTAAACATCAAGACAAGTGCAAGTTGACAGTATAAA  997
      |||||||||||||||| ||||||||||||||||| |||||||||||||||
seq2  GATACTATGAAAGGTT-AACATCAAGACAAGTGC-AGTTGACAGTATAAA  998

seq1  ACCAACGGAGAGCTTTCTGCCTTTATTTGCTCTCCCATCTCT-AAAATTA  1046
      ||||||||||||||||||||| |||||||||||||||| |||   |||||
seq2  ACCAACGGAGAGCTTTCTGCC-TTATTTGCTCTCCCAT-TCTCCTAATTA  1046

seq1  TGTAAGTAGTACACTAAAAACAATTCCATGTCTAGAGACAGC  1088
      ||| |||||||||||||||||||||||||||||| |||||||
seq2  TGTTAGTAGTACACTAAAAACAATTCCATGTCTAAAGACAGC  1088


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