BAC Information

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BAC

Clone NameB6Ng01-198P09
Chromosome19 (Build37)
Map Location 15,303,045 - 15,432,631
singlet/doubletdoublet
Overlap genenone
Upstream geneEG667433, Tle4, EG433225, EG635497
Downstream genePomc-ps1, LOC667482, Psat1, LOC100041424, Cep78, LOC100042048, Gnaq, E030024N20Rik, LOC624438
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-198P09.bB6Ng01-198P09.g
ACCGA020417GA020418
length9961,057
definitionB6Ng01-198P09.b B6Ng01-198P09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,431,657 - 15,432,631)(15,303,045 - 15,304,104)
sequence
gaattctagagtctaaaaggctcttttatctgaatatttagggtggttct
actgtctccaacattctctgggaccatcatagtgagtggggacttgtttt
cacagttgtacttcctattacagagttcttggaagtgggcttttccattg
gtttgtgaacatttcatctagtgaaaattcctagatcaaagctctttgta
aaaagtcaatgactttggagatgatgggtctggacgtctgtgtagacacc
tttaagtggcagaatcctcattctttcttacaattctttttgaactgaga
ttgctgcattctgattgtcactggaaaagtgtctttgttgtgtgctgggt
caaaaaatagatgacagatgtggcctcttctatgtgtatttattgggggt
tgtatacttttaattccagccctaaagtcttcagctagaaatgtagctca
tgggcaagggatggtaaatttctaaaagagatctcagaaggtggattttt
agaatcccctaagatggggataaggggagaccttttaaataaaccaagtg
cccacaatggctttattaccactctgctccttcacaccgtagattacacg
aaggcctggagactaatttcggcaacagccacaatttactagctatagtg
ggcctcagatgaatagtttcttgtaaaatcagtggcagctttatcctagc
agagcacaaataaatcagctctttattattccacattcattttaatcctg
agacattagtcagtgagaccttttctgcagcctaataaacagcagcagca
gcagtttttctttatgagagtagttgttcatcctaaaattagagccagca
ttaggcagaggcaggaactttttgtcagatgattttaagggattatataa
tatgagactataataggtgcattgaaaacctgttatcccaatggtgttat
aaagaatagaaagggttcataatttttactgtatgtgtggttactt

gaattctttgtttagctctgtaccccatttttaatagggttatttggttc
tctggagtttaaattcttgagttctttgtatatattgcatattagtcttc
tattgaatgtaggattggtaaagatcttttcctaatctgttggctctcat
ttgtcttattgacagtgtcctttgccttagagaagcttttcaattttatg
agatgccatttggctagtggatcttagagcctgagccattagtattctgt
tcaggcatagctttgcaaacagagtattgtcaaagctgacttttgacttt
tcataggactcatacacagaaacaagtaatatgccagaatatcccgtgta
tatataagaagcatagaggtaaaagctgcttgtgaaggttccacaatcct
aatgtgtttagtgtgaggcagaacactgtgataagacattagagcagtag
aggcagaccaggccacagagggctccatgtcacttgtaagagttgatatg
tagaagcttcccaaattcccagtaagctacatgctgaatgccttgcctga
agcttttgagaaatctggaacccctagaatttaggagtagttttcaacct
tatctaatgctgtgaccctttgatgcgatttctcatcttgtggtgacccc
caaccataaaactatttcattgctacttcataactgtaaattggctactg
ttttaaactgtaatataaatatctggtatgcaggtgactcccatgaatga
gtcatttgaccaccaaagggatcctgacacaggttgagaactactgaggt
aagacctaaagagacaaagtatagggtcacagaggagatggtttggggaa
ctattaggacttcagcctagtcccctgttctctttactgtctgacaccag
gagatgaggagatctctctgctcccacctggatgtacttgtggtaacaca
ggcccaagcacagagccagttgaccgttgattggaatctctaaactcaaa
ttaactttccacttaatcaatttttggcttgggtttttggctcactatag
cctgact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_15431657_15432631
seq2: B6Ng01-198P09.b_46_1041 (reverse)

seq1  AAGTAACC-CACATACAGT-AAAATTATGA--CCCTTCTA-TCTTTAT-A  44
      |||||||| |||||||||| ||||||||||  || ||||| ||||||| |
seq2  AAGTAACCACACATACAGTAAAAATTATGAACCCTTTCTATTCTTTATAA  50

seq1  CA-CATGGGTACA----GTTTTC-ATGCA-CTATTATAGTCTCATATTAT  87
      || ||| || | |    |||||| ||||| ||||||||||||||||||||
seq2  CACCATTGGGATAACAGGTTTTCAATGCACCTATTATAGTCTCATATTAT  100

seq1  AT-ATCC--TTAAATCATCTGGC-AAAAGTTCCTGCCTCTGCCTAATGCT  133
      || ||||  | |||||||||| | ||||||||||||||||||||||||||
seq2  ATAATCCCTTAAAATCATCTGACAAAAAGTTCCTGCCTCTGCCTAATGCT  150

seq1  GGCTCTAA-TTTAGGATGAACAACTACTCTCATAAAGAAAAACTGCTGCT  182
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTAATTTTAGGATGAACAACTACTCTCATAAAGAAAAACTGCTGCT  200

seq1  GCTGCTGTTTATTAGGCTGCAG-AAAGGTCTCACTGACTAATGTCTCAGG  231
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GCTGCTGTTTATTAGGCTGCAGAAAAGGTCTCACTGACTAATGTCTCAGG  250

seq1  ATT-AAATGAATGTGGAATAAT-AAGAGCTGATTTATTTGTGCTCTGCTA  279
      ||| |||||||||||||||||| |||||||||||||||||||||||||||
seq2  ATTAAAATGAATGTGGAATAATAAAGAGCTGATTTATTTGTGCTCTGCTA  300

seq1  GGATAAAGCTGCCACTGATTTTACAAGAAACTATTCATCTGAGGCCCACT  329
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAAAGCTGCCACTGATTTTACAAGAAACTATTCATCTGAGGCCCACT  350

seq1  ATAGCTAGTAAATTGTGGCTGTTGCCGAAATTAGTCTCCAGGCCTTCGTG  379
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTAGTAAATTGTGGCTGTTGCCGAAATTAGTCTCCAGGCCTTCGTG  400

seq1  TAATCTACGGTGTGAAGGAGCAGAGTGGTAATAAAGCCATTGTGGGCACT  429
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTACGGTGTGAAGGAGCAGAGTGGTAATAAAGCCATTGTGGGCACT  450

seq1  TGGTTTATTTAAAAGGTCTCCCCTTATCCCCATCTTAGGGGATTCTAAAA  479
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTATTTAAAAGGTCTCCCCTTATCCCCATCTTAGGGGATTCTAAAA  500

seq1  ATCCACCTTCTGAGATCTCTTTTAGAAATTTACCATCCCTTGCCCATGAG  529
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACCTTCTGAGATCTCTTTTAGAAATTTACCATCCCTTGCCCATGAG  550

seq1  CTACATTTCTAGCTGAAGACTTTAGGGCTGGAATTAAAAGTATACAACCC  579
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATTTCTAGCTGAAGACTTTAGGGCTGGAATTAAAAGTATACAACCC  600

seq1  CCAATAAATACACATAGAAGAGGCCACATCTGTCATCTATTTTTTGACCC  629
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATAAATACACATAGAAGAGGCCACATCTGTCATCTATTTTTTGACCC  650

seq1  AGCACACAACAAAGACACTTTTCCAGTGACAATCAGAATGCAGCAATCTC  679
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACACAACAAAGACACTTTTCCAGTGACAATCAGAATGCAGCAATCTC  700

seq1  AGTTCAAAAAGAATTGTAAGAAAGAATGAGGATTCTGCCACTTAAAGGTG  729
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAAAAAGAATTGTAAGAAAGAATGAGGATTCTGCCACTTAAAGGTG  750

seq1  TCTACACAGACGTCCAGACCCATCATCTCCAAAGTCATTGACTTTTTACA  779
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACACAGACGTCCAGACCCATCATCTCCAAAGTCATTGACTTTTTACA  800

seq1  AAGAGCTTTGATCTAGGAATTTTCACTAGATGAAATGTTCACAAACCAAT  829
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCTTTGATCTAGGAATTTTCACTAGATGAAATGTTCACAAACCAAT  850

seq1  GGAAAAGCCCACTTCCAAGAACTCTGTAATAGGAAGTACAACTGTGAAAA  879
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAGCCCACTTCCAAGAACTCTGTAATAGGAAGTACAACTGTGAAAA  900

seq1  CAAGTCCCCACTCACTATGATGGTCCCAGAGAATGTTGGAGACAGTAGAA  929
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCCCCACTCACTATGATGGTCCCAGAGAATGTTGGAGACAGTAGAA  950

seq1  CCACCCTAAATATTCAGATAAAAGAGCCTTTTAGACTCTAGAATTC  975
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCTAAATATTCAGATAAAAGAGCCTTTTAGACTCTAGAATTC  996


seq1: chr19_15303045_15304104
seq2: B6Ng01-198P09.g_64_1120

seq1  GAATTCTTTGTTTAGCTCTGTACCCCATTTTTAATAGGGTTATTTGGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTAGCTCTGTACCCCATTTTTAATAGGGTTATTTGGTTC  50

seq1  TCTGGAGTTTAAATTCTTGAGTTCTTTGTATATATTGCATATTAGTCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGTTTAAATTCTTGAGTTCTTTGTATATATTGCATATTAGTCTTC  100

seq1  TATTGAATGTAGGATTGGTAAAGATCTTTTCCTAATCTGTTGGCTCTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAATGTAGGATTGGTAAAGATCTTTTCCTAATCTGTTGGCTCTCAT  150

seq1  TTGTCTTATTGACAGTGTCCTTTGCCTTAGAGAAGCTTTTCAATTTTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTATTGACAGTGTCCTTTGCCTTAGAGAAGCTTTTCAATTTTATG  200

seq1  AGATGCCATTTGGCTAGTGGATCTTAGAGCCTGAGCCATTAGTATTCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCCATTTGGCTAGTGGATCTTAGAGCCTGAGCCATTAGTATTCTGT  250

seq1  TCAGGCATAGCTTTGCAAACAGAGTATTGTCAAAGCTGACTTTTGACTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCATAGCTTTGCAAACAGAGTATTGTCAAAGCTGACTTTTGACTTT  300

seq1  TCATAGGACTCATACACAGAAACAAGTAATATGCCAGAATATCCCGTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGGACTCATACACAGAAACAAGTAATATGCCAGAATATCCCGTGTA  350

seq1  TATATAAGAAGCATAGAGGTAAAAGCTGCTTGTGAAGGTTCCACAATCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAAGAAGCATAGAGGTAAAAGCTGCTTGTGAAGGTTCCACAATCCT  400

seq1  AATGTGTTTAGTGTGAGGCAGAACACTGTGATAAGACATTAGAGCAGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTTTAGTGTGAGGCAGAACACTGTGATAAGACATTAGAGCAGTAG  450

seq1  AGGCAGACCAGGCCACAGAGGGCTCCATGTCACTTGTAAGAGTTGATATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGACCAGGCCACAGAGGGCTCCATGTCACTTGTAAGAGTTGATATG  500

seq1  TAGAAGCTTCCCAAATTCCCAGTAAGCTACATGCTGAATGCCTTGCCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGCTTCCCAAATTCCCAGTAAGCTACATGCTGAATGCCTTGCCTGA  550

seq1  AGCTTTTGAGAAATCTGGAACCCCTAGAATTTAGGAGTAGTTTTCAACCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTTGAGAAATCTGGAACCCCTAGAATTTAGGAGTAGTTTTCAACCT  600

seq1  TATCTAATGCTGTGACCCTTTGATGCGATTTCTCATCTTGTGGTGACCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAATGCTGTGACCCTTTGATGCGATTTCTCATCTTGTGGTGACCCC  650

seq1  CAACCATAAAACTATTTCATTGCTACTTCATAACTGTAAATTGGCTACTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCATAAAACTATTTCATTGCTACTTCATAACTGTAAATTGGCTACTG  700

seq1  TTTTAAACTGTAATATAAATATCTGGTATGCAGGTGACTCCCATGAATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAACTGTAATATAAATATCTGGTATGCAGGTGACTCCCATGAATGA  750

seq1  GTCATTTGACCACCAAAGGGATCCTGACACAGGTTGAGAACTACTGAGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTTGACCACCAAAGGGATCCTGACACAGGTTGAGAACTACTGAGGT  800

seq1  AAGACCTAAAGAGACAAAGTATA-GGTCACAGAGGAGATGGTTT-GGGAA  848
      ||||||||||||||||||||||| |||||||||||||||||||| |||||
seq2  AAGACCTAAAGAGACAAAGTATAGGGTCACAGAGGAGATGGTTTGGGGAA  850

seq1  CTATTAGGACTTCAGCCTAGTCCCCTG-TCTCTTTACTGTCTGACACCAG  897
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CTATTAGGACTTCAGCCTAGTCCCCTGTTCTCTTTACTGTCTGACACCAG  900

seq1  GAGATGAGGAGATCTCTTCTGCTCCCACCTGGATGTAC-TGTGGTAACAC  946
      |||||||||||||||| ||||||||||||||||||||| |||||||||||
seq2  GAGATGAGGAGATCTC-TCTGCTCCCACCTGGATGTACTTGTGGTAACAC  949

seq1  AGGCCCAAAGCACAGAGCCAAGTGACCGTTGATTGGGATCTCTAAACTCA  996
      |||||| |||||||||||||  |||||||||||||| |||||||||||||
seq2  AGGCCC-AAGCACAGAGCCAGTTGACCGTTGATTGGAATCTCTAAACTCA  998

seq1  AAATTAAACTTTCCACTTAATCAATTTTTTTGGCTTGGGTTTTTGGTCTC  1046
      ||  | ||||||||||||||||||  |||||||||||||||||||| |||
seq2  AA--TTAACTTTCCACTTAATCAA--TTTTTGGCTTGGGTTTTTGG-CTC  1043

seq1  ACTAATAG-CTGACT  1060
      ||| |||| ||||||
seq2  ACT-ATAGCCTGACT  1057


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