BAC Information

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BAC

Clone NameB6Ng01-201G15
Chromosome19 (Build37)
Map Location 37,527,656 - 37,528,509
singlet/doubletsinglet
Overlap genenone
Upstream genePcgf5, Hectd2, LOC668215, Ppp1r3c, Tnks2, Fgfbp3, Btaf1, Cpeb3, March5, LOC668230, Ide, LOC100043010, Kif11, EG667490, LOC631069, Hhex
Downstream geneExoc6, Cyp26c1, Cyp26a1, LOC668248, LOC668251, LOC209281, Fer1l3, Cep55, Gpr120, Rbp4, Pde6c, 5730455O13Rik, Lgi1, Tmem20
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201G15.bB6Ng01-201G15.g
ACCGA022195GA022196
length1,189860
definitionB6Ng01-201G15.b B6Ng01-201G15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagaacttttcagctggggaacgagagtaccagtgagtacagctt
tacgaggtaagtctgatcttgaactttctaaggaaattcaagacagtcta
tcagaagtaaagtggaatatgtttggccttgaattttttctggtgttagg
agcccttttgttccttttcacatgttatcaagtgattaagatagggctga
aaattctagaggaaattcaggacaagctatcagaagtaaagcggggagag
agagcaggagcaaagagaaaatatggtacacaaaataagcgtacaggcct
ttccacgggtcttgaacctgaggaaaagttaaggttaggtaggaatacct
ggagagagattagaagaaaaagaggaaaaagggaaaagaagaaagatcaa
ttagcggaggtctctaggaaaaggagcctgtgctcatcgctggatgggct
cggggagccagctcttggtagctctgaatcagatgatgaattctcctctg
aagaaacagactgggaggaagaagcagctcattatgagaaaaaagggtac
cagccaggtaaagtgctagctaatcagttaaggaagccaaaagcggctgg
cgaaggccagtttgctgattggcctcagggcagtcggcttcaaggtccgc
cctatgcggagcccccgccctgcgtagtgcgtcagcaatgcgcagagaga
tgcgcagagaggcagtgcgcagagaggcagtgcgcagactcattcattcc
cagagaggaacaaaggaaaatacaacaggcatttccggtctttgaaggag
ccgagggtgggcgtgtccacgctccggtagaatacttacaaattaagaaa
ttgccgagtcggtccgtaaatacggaaccaatgctaattttaccttggtg
cagttagacaggctcgccggcatggcactaactcctgctgactggcaacg
gttgtaaaagccgctctccctagtatgggcaaatatatggaatggagagc
ttctttggcatgagcttgcacaagcgcaggtcccgagcaacgcagctgct
ttgacttcagagtcagagagaattggacttggactgtacgggttcagaag
cttattcgctgatccagcactacattggggagctaggccagattctctca
cggtctatgaggcctcggtagagcactctcctgagccag
gaattcagttccctaggcagctcaactctgacaggctaagaaaatctgat
ttcgtaggctagccacctttcccttgttaatgaggaagcaacattcttgc
atggttttcaacggtctggatggaagatgaaccccaaatctcaagcttaa
aaaagtttccatacaagctgtgagaaatacacgtgtctaagccaatgcag
gagtacaggtctatagtcccagcttcaaaaggttgaagaaggaggattat
ttgagctgaggagttgaaaactagtttagacgatgaaatgggtaatctct
ctctgtctttatgtgtcttctttaaaaagtatgtgcacgctgtgtgtgtg
tgtgtggtgtgagttggtggataatttgtcggagagggttccaggagtca
attaacctagccatatctaccaaactggtcaagttaaggtagaggaggtg
gctggttgggagactaggggaaaataaccaggttgtcaggctttcctgag
ccatttcactagactcaggactctcttaaaaaataataaaataggctttc
ggttcacaactgtgccctggagcagatcgtgtgctccagcccccacccca
cccctggggctcacacccagagaccttgacctcaggagttctgacaccac
caggctcacagaattgttcctgactaaaaggaaacgcagggagaaaaatg
gagcagagactgaagggaaggccatctagagacctcgtcaccttgggatc
catcccatctgcagacaccaataccttgtacacaattgctgacgccaatg
gcatgcttgctgacaggagccttggtattgctgtctctgagaggatctgc
ccagcatctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_37527656_37528509
seq2: B6Ng01-201G15.g_67_925

seq1  GAATTCAGTTCCCTAGGCAGCTCAACTCTGACAGGCTAAGAAAATCTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTCCCTAGGCAGCTCAACTCTGACAGGCTAAGAAAATCTGAT  50

seq1  TTCGTAGGCTAGCCACCTTTCCCTTGTTAATGAGGAAGCAACATTCTTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTAGGCTAGCCACCTTTCCCTTGTTAATGAGGAAGCAACATTCTTGC  100

seq1  ATGGTTTTCAACGGTCTGGATGGAAGATGAACCCCAAATCTCAAGCTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTTTCAACGGTCTGGATGGAAGATGAACCCCAAATCTCAAGCTTAA  150

seq1  AAAAGTTTCCATACAAGCTGTGAGAAATACACGTGTCTAAGCCAATGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTTCCATACAAGCTGTGAGAAATACACGTGTCTAAGCCAATGCAG  200

seq1  GAGTACAGGTCTATAGTCCCAGCTTCAAAAGGTTGAAGAAGGAGGATTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACAGGTCTATAGTCCCAGCTTCAAAAGGTTGAAGAAGGAGGATTAT  250

seq1  TTGAGCTGAGGAGTTGAAAACTAGTTTAGACGATGAAATGGGTAATCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCTGAGGAGTTGAAAACTAGTTTAGACGATGAAATGGGTAATCTCT  300

seq1  CTCTGTCTTTATGTGTCTTCTTTAAAAAGTATGTGCACGCTGTGTGTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCTTTATGTGTCTTCTTTAAAAAGTATGTGCACGCTGTGTGTGTG  350

seq1  TGTGTGGTGTGAGTTGGTGGATAATTTGTCGGAGAGGGTTCCAGGAGTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGGTGTGAGTTGGTGGATAATTTGTCGGAGAGGGTTCCAGGAGTCA  400

seq1  ATTAACCTAGCCATATCTACCAAACTGGTCAAGTTAAGGTAGAGGAGGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACCTAGCCATATCTACCAAACTGGTCAAGTTAAGGTAGAGGAGGTG  450

seq1  GCTGGTTGGGAGACTAGGGGAAAATAACCAGGTTGTCAGGCTTTCCTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTTGGGAGACTAGGGGAAAATAACCAGGTTGTCAGGCTTTCCTGAG  500

seq1  CCATTTCACTAGACTCAGGACTCTCTTAAAAAATAATAAAATAGGCTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTCACTAGACTCAGGACTCTCTTAAAAAATAATAAAATAGGCTTTC  550

seq1  GGTTCACAACTGTGCCCTGGAGCAGATCGTGTGCTCCAGCCCCCACCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCACAACTGTGCCCTGGAGCAGATCGTGTGCTCCAGCCCCCACCCCA  600

seq1  CCCCTGGGGCTCACACCCAGAGACCTTGACCTCAGGAGTTCTGACACCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGGGGCTCACACCCAGAGACCTTGACCTCAGGAGTTCTGACACCAC  650

seq1  CAGGCTCACAGAATTGTTCCTGACT-AAAGGAAACGCAGGGAGAAAAATG  699
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CAGGCTCACAGAATTGTTCCTGACTAAAAGGAAACGCAGGGAGAAAAATG  700

seq1  GAGCAGAGACTGAAGGGAAGGCCATCTAGAGACCTCGCCACCTTGGGATC  749
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GAGCAGAGACTGAAGGGAAGGCCATCTAGAGACCTCGTCACCTTGGGATC  750

seq1  CATCCCATCTGCAGACACCAA-ACC-TGTACACAATTGCTGACGCCAA-G  796
      ||||||||||||||||||||| ||| |||||||||||||||||||||| |
seq2  CATCCCATCTGCAGACACCAATACCTTGTACACAATTGCTGACGCCAATG  800

seq1  GCATGCTTGCAGACAGGAGCC-TGGTATGGCTGTCCTCTGAGAGGCTCTG  845
      |||||||||| |||||||||| |||||| ||||| |||||||||| ||||
seq2  GCATGCTTGCTGACAGGAGCCTTGGTATTGCTGT-CTCTGAGAGGATCTG  849

seq1  -CCAGCATCT  854
       |||||||||
seq2  CCCAGCATCT  859