BAC Information

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BAC

Clone NameB6Ng01-202C18
Chromosome19 (Build37)
Map Location 33,133,702 - 33,267,028
singlet/doubletdoublet
Overlap gene6530404N21Rik
Upstream geneAsah2, EG668042, Sgms1, 2700046G09Rik, LOC100042138, LOC672490, LOC100042823, Minpp1, Papss2, Atad1, Pten, B430203M17Rik
Downstream geneLOC638381, EG668095, LOC628236, AI747699, EG668106, EG668112, EG668114, EG329055, EG433241, LOC668127, Lipf, Lipk, EG383462, Lipn, Ankrd22, Stambpl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-202C18.bB6Ng01-202C18.g
ACCGA022740GA022741
length1,1371,125
definitionB6Ng01-202C18.b B6Ng01-202C18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(33,133,702 - 33,134,847)(33,265,912 - 33,267,028)
sequence
gaattccaattttatcccaataaggctattaaaatagatcatatcaaata
ttggggaaatggtttttttgttgaaaaacaagcagatgtaaatttattat
tttcttgcacatcagtaacaaactggatctgggaggccactgttctcttt
agccaagacagcccccttctgtgaaccgttgtcatcagctaacttgtcca
ttagttaaggcgacccacgtaacccttgtaagcatttggcttactagcca
agcctcctgcaaatatttcagtcttcaaatcttccccttgcttcctagag
taagttatcttttgatagcttttctaagcttaaacctggtatcaatgacc
accagagaaaagccaattggggaacttgaaggggaaaatatttcttttgg
ctcccaactagcaatctgagacagttgttcccctggcctgcctgggaagc
cgattgtaactcttcagttcagggtaactggtcagcattagtcaaaggaa
tgctttataaaagaagaaaattgatgacgcttatagaatttgccatggct
gaagatcacagggctcaaaaattaagaagttcactctccacatgacactc
agttctgagtagaggttttctttattctagaactccatttggcaggattc
tgacccatggcccactgttactgcttttagaatacttttttttttttttt
ttaaatcagggcctttgaaaaatttctttgaattcattagagattggcaa
aagaagagcgtgaatttgaggccgatataggagacaattctaataaccct
tccagctaccctgggcaactatcgaatctttgccttctgttttggtacag
ttgcctaagaggacatggaggttcatcctggagagggtcattttgtcttt
ctcagactgacacaagccattcttccacagattaaagtgtatcatgtgac
tcaagtgccctaccatcctggtatacttctgtagtatttacctttttctg
tggctgtggtgaaatttcctgacgagaccagatgagtttgtactctggct
atcaattcagagggttcagcccatggtcaactgtctgctctgagtaaggt
cattatgccaagtgcatcatgtggtacagagctgatc
gaattcatcctctggattcaaatataggaagctcaaattgatgctctcat
agtacctgcaaccatgtcagcttgttagaagagagaaactgaatgaacgc
tttgtctgtgagactgggctgttttgaaagatcttcaagtccttattgca
gtctgagatgaggctgtcagcactacgagttgtaagccagggctcaaaat
aatgtgtgctgctcagcttcccagacaagtgcctggtcttcatcattctg
gaggcacctcaaaacctttgcaagttgagaatggtattgtgcaattgtgt
aaaattcaaacagcttgtgagcctcaggtcctgggaaacagcaaaggctt
gagctggatggaagcttgacaagtcttcactgtggtccatttttatctgt
gaccatgacaacactctccaaaagagatgggatcattcctttacctagag
gctcttcagaaaacaatttcatcacttcccttactgtcaagaatttcatc
tcagatcaatctaactgtctcatgggctacagaattgatgagccctgact
gcagagcctgctgctctcaccaaaattagggattctgtctttcagtgcaa
ataaatgtcatcactcgtcatcatatatggtatatatctgctggtccttt
tagcttgatcactgctgaaaataagaggtagacattattatcatcatgca
tcatagatgtatctagtgcttaacaaatattttctgagacagctatattg
catatgtaaggatgaagagcccttccctaacccttatacaacctttgaga
attagtaacttagcactacctatctacttagctgggtaggaaaagaaatg
tctaggcagcaattgtttatcccttaggcaagctagggactgttaacctt
aaattatggaaaatggacaaacttccccatttacatgctagattatgaaa
gccagtgaagaataatatatgaataccttctggcaactactctgagttcc
ctccttttagatttccaggtgttacactatcggtgggtgactgcacttat
gaagtatcacagtgagatctggaggttttattgacagtttttctcagaga
aggtattctcagtaagccattttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_33133702_33134847
seq2: B6Ng01-202C18.b_44_1180

seq1  GAATTCCAATTTTATCCCAATAAGGCTATTAAAATAGATCATATCAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATTTTATCCCAATAAGGCTATTAAAATAGATCATATCAAATA  50

seq1  TTGGGGAAATGGTTTTTTTGTTGAAAAACAAGCAGATGTAAATTTATTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGAAATGGTTTTTTTGTTGAAAAACAAGCAGATGTAAATTTATTAT  100

seq1  TTTCTTGCACATCAGTAACAAACTGGATCTGGGAGGCCACTGTTCTCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGCACATCAGTAACAAACTGGATCTGGGAGGCCACTGTTCTCTTT  150

seq1  AGCCAAGACAGCCCCCTTCTGTGAACCGTTGTCATCAGCTAACTTGTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAGACAGCCCCCTTCTGTGAACCGTTGTCATCAGCTAACTTGTCCA  200

seq1  TTAGTTAAGGCGACCCACGTAACCCTTGTAAGCATTTGGCTTACTAGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTAAGGCGACCCACGTAACCCTTGTAAGCATTTGGCTTACTAGCCA  250

seq1  AGCCTCCTGCAAATATTTCAGTCTTCAAATCTTCCCCTTGCTTCCTAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCCTGCAAATATTTCAGTCTTCAAATCTTCCCCTTGCTTCCTAGAG  300

seq1  TAAGTTATCTTTTGATAGCTTTTCTAAGCTTAAACCTGGTATCAATGACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTATCTTTTGATAGCTTTTCTAAGCTTAAACCTGGTATCAATGACC  350

seq1  ACCAGAGAAAAGCCAATTGGGGAACTTGAAGGGGAAAATATTTCTTTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAGAAAAGCCAATTGGGGAACTTGAAGGGGAAAATATTTCTTTTGG  400

seq1  CTCCCAACTAGCAATCTGAGACAGTTGTTCCCCTGGCCTGCCTGGGAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAACTAGCAATCTGAGACAGTTGTTCCCCTGGCCTGCCTGGGAAGC  450

seq1  CGATTGTAACTCTTCAGTTCAGGGTAACTGGTCAGCATTAGTCAAAGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATTGTAACTCTTCAGTTCAGGGTAACTGGTCAGCATTAGTCAAAGGAA  500

seq1  TGCTTTATAAAAGAAGAAAATTGATGACGCTTATAGAATTTGCCATGGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTATAAAAGAAGAAAATTGATGACGCTTATAGAATTTGCCATGGCT  550

seq1  GAAGATCACAGGGCTCAAAAATTAAGAAGTTCACTCTCCACATGACACTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATCACAGGGCTCAAAAATTAAGAAGTTCACTCTCCACATGACACTC  600

seq1  AGTTCTGAGTAGAGGTTTTCTTTATTCTAGAACTCCATTTGGCAGGATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTGAGTAGAGGTTTTCTTTATTCTAGAACTCCATTTGGCAGGATTC  650

seq1  TGACCCATGGCCCACTGTTACTGCTTTTAGAATACTTTTTTTTTTTTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCATGGCCCACTGTTACTGCTTTTAGAATACTTTTTTTTTTTTTTT  700

seq1  TTAAATCAGGGCCTTTGAAAAATTTCTTTGAATTCATTAGAGATTGGCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATCAGGGCCTTTGAAAAATTTCTTTGAATTCATTAGAGATTGGCAA  750

seq1  AAGAAGAGCGTGAATTTGAGGCCGATATAGGAGACAATTCTAATAACCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAGCGTGAATTTGAGGCCGATATAGGAGACAATTCTAATAACCCT  800

seq1  TCCAGCTACCCTGGGCAACTATCGAATCTTTGCCTTCTGTTTTGGTACAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCTACCCTGGGCAACTATCGAATCTTTGCCTTCTGTTTTGGTACAG  850

seq1  TTGCCTAAGAGGACATGGAGGTTCATCCTGGAGAGGGTCATTTTGTC-TT  899
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TTGCCTAAGAGGACATGGAGGTTCATCCTGGAGAGGGTCATTTTGTCTTT  900

seq1  CTCAGACTGACACAAGCCATTCTTCCACAGATTAAAGTGTATCATGTGAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGACTGACACAAGCCATTCTTCCACAGATTAAAGTGTATCATGTGAC  950

seq1  TCAAGTG-CCTACCATCCTGGTATACTTCTGTAGTAATTTACCTTTTTTC  998
      ||||||| ||||||||||||||||||||||||||| ||||||| ||||||
seq2  TCAAGTGCCCTACCATCCTGGTATACTTCTGTAGT-ATTTACC-TTTTTC  998

seq1  TGTGGCTGTGGTGAAATTTCCTGACAGAGACCAGATGAGTTTGTTAACTC  1048
      ||||||||||||||||||||||||| ||||||||||||||||||  ||||
seq2  TGTGGCTGTGGTGAAATTTCCTGAC-GAGACCAGATGAGTTTGT--ACTC  1045

seq1  TGGCCTATCATTTCAGAGGGTCCAGCCCATGGTCAACTGTCTGCTCTTGA  1098
      ||| |||||| |||||||||| |||||||||||||||||||||||| |||
seq2  TGG-CTATCAATTCAGAGGGTTCAGCCCATGGTCAACTGTCTGCTC-TGA  1093

seq1  GT-AGGGCATTATGGCAAAAGTGGCATCATGTGGTAGCAAGAGCTGATC  1146
      || ||| ||||||| |  |||| |||||||||||||   ||||||||||
seq2  GTAAGGTCATTATGCC--AAGT-GCATCATGTGGTA--CAGAGCTGATC  1137

seq1: chr19_33265912_33267028
seq2: B6Ng01-202C18.g_65_1189 (reverse)

seq1  GGAAAAT-GCTTACTGAGAATACC-TCTCTGAGAAAAACTGTCAATAAAA  48
      ||||||| |||||||||||||||| |||||||||||||||||||||||||
seq2  GGAAAATGGCTTACTGAGAATACCTTCTCTGAGAAAAACTGTCAATAAAA  50

seq1  CTTCCAGATCTCACTGTTGATACTTCAT-AGTGCAGTCACC--ACGATAG  95
      | |||||||||||||| ||||||||||| ||||||||||||   ||||||
seq2  CCTCCAGATCTCACTG-TGATACTTCATAAGTGCAGTCACCCACCGATAG  99

seq1  TGTAACCACTGGGAATCTAAAAGGAGGGAACTCAGAGTAGTTGCCAG-AG  144
      ||||||  |||| |||||||||||||||||||||||||||||||||| ||
seq2  TGTAACACCTGGAAATCTAAAAGGAGGGAACTCAGAGTAGTTGCCAGAAG  149

seq1  GTATTCATATA-TATTCTTCACTGGCTTTCAT-ATCTAGCATGTAAATGG  192
      ||||||||||| |||||||||||||||||||| |||||||||||||||||
seq2  GTATTCATATATTATTCTTCACTGGCTTTCATAATCTAGCATGTAAATGG  199

seq1  GG-AGTTTGTCCATTTTCCATAATTTAAGGTTAACAGTCCCTAGCTTGCC  241
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTTTGTCCATTTTCCATAATTTAAGGTTAACAGTCCCTAGCTTGCC  249

seq1  TAAGGGATAAACAATTGCTGCCTAGACATTTCTTTTCCTACCCAGCTAAG  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGATAAACAATTGCTGCCTAGACATTTCTTTTCCTACCCAGCTAAG  299

seq1  TAGATAGGTAGTGCTAAGTTACTAATTCTCAAAGGTTGTATAAGGGTTAG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAGGTAGTGCTAAGTTACTAATTCTCAAAGGTTGTATAAGGGTTAG  349

seq1  GGAAGGGCTCTTCATCCTTACATATGCAATATAGCTGTCTCAGAAAATAT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGGCTCTTCATCCTTACATATGCAATATAGCTGTCTCAGAAAATAT  399

seq1  TTGTTAAGCACTAGATACATCTATGATGCATGATGATAATAATGTCTACC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAAGCACTAGATACATCTATGATGCATGATGATAATAATGTCTACC  449

seq1  TCTTATTTTCAGCAGTGATCAAGCTAAAAGGACCAGCAGATATATACCAT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATTTTCAGCAGTGATCAAGCTAAAAGGACCAGCAGATATATACCAT  499

seq1  ATATGATGACGAGTGATGACATTTATTTGCACTGAAAGACAGAATCCCTA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATGACGAGTGATGACATTTATTTGCACTGAAAGACAGAATCCCTA  549

seq1  ATTTTGGTGAGAGCAGCAGGCTCTGCAGTCAGGGCTCATCAATTCTGTAG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGTGAGAGCAGCAGGCTCTGCAGTCAGGGCTCATCAATTCTGTAG  599

seq1  CCCATGAGACAGTTAGATTGATCTGAGATGAAATTCTTGACAGTAAGGGA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGAGACAGTTAGATTGATCTGAGATGAAATTCTTGACAGTAAGGGA  649

seq1  AGTGATGAAATTGTTTTCTGAAGAGCCTCTAGGTAAAGGAATGATCCCAT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATGAAATTGTTTTCTGAAGAGCCTCTAGGTAAAGGAATGATCCCAT  699

seq1  CTCTTTTGGAGAGTGTTGTCATGGTCACAGATAAAAATGGACCACAGTGA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTGGAGAGTGTTGTCATGGTCACAGATAAAAATGGACCACAGTGA  749

seq1  AGACTTGTCAAGCTTCCATCCAGCTCAAGCCTTTGCTGTTTCCCAGGACC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGTCAAGCTTCCATCCAGCTCAAGCCTTTGCTGTTTCCCAGGACC  799

seq1  TGAGGCTCACAAGCTGTTTGAATTTTACACAATTGCACAATACCATTCTC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCTCACAAGCTGTTTGAATTTTACACAATTGCACAATACCATTCTC  849

seq1  AACTTGCAAAGGTTTTGAGGTGCCTCCAGAATGATGAAGACCAGGCACTT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGCAAAGGTTTTGAGGTGCCTCCAGAATGATGAAGACCAGGCACTT  899

seq1  GTCTGGGAAGCTGAGCAGCACACATTATTTTGAGCCCTGGCTTACAACTC  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGGAAGCTGAGCAGCACACATTATTTTGAGCCCTGGCTTACAACTC  949

seq1  GTAGTGCTGACAGCCTCATCTCAGACTGCAATAAGGACTTGAAGATCTTT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGCTGACAGCCTCATCTCAGACTGCAATAAGGACTTGAAGATCTTT  999

seq1  CAAAACAGCCCAGTCTCACAGACAAAGCGTTCATTCAGTTTCTCTCTTCT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAGCCCAGTCTCACAGACAAAGCGTTCATTCAGTTTCTCTCTTCT  1049

seq1  AACAAGCTGACATGGTTGCAGGTACTATGAGAGCATCAATTTGAGCTTCC  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGCTGACATGGTTGCAGGTACTATGAGAGCATCAATTTGAGCTTCC  1099

seq1  TATATTTGAATCCAGAGGATGAATTC  1117
      ||||||||||||||||||||||||||
seq2  TATATTTGAATCCAGAGGATGAATTC  1125