BAC Information

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BAC

Clone NameB6Ng01-204J16
Chromosome19 (Build37)
Map Location 13,692,223 - 13,810,892
singlet/doubletdoublet
Overlap geneOlfr1487, GA_x5J8B7W6KF8-5425983-5425664, Olfr1489, Olfr1490, Olfr1491, Olfr1492-ps1, Olfr1493-ps1
Upstream geneEG240549, Glyat, Olfr1442, Olfr1443, Keg1, Zfp91, Cntf, Lpxn, EG383436, Olfr1444, Olfr1445, Olfr1446, Olfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451, Olfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1, Olfr1457, EG667271, Olfr1459, Olfr1460-ps1, Olfr1461, Olfr1462, Olfr1463, LOC667300, Olfr1465, Olfr1466, Olfr1467, Olfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472, Olfr1473-ps1, Olfr1474, Olfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655, Olfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653
Downstream geneOlfr1494, Olfr1495, Olfr1496, Olfr1497, Olfr1498-ps1, Olfr1499, Olfr1500, Olfr1501, Olfr1502, Olfr1503-ps1, Olfr1504, Olfr1505, EG667433, Tle4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-204J16.bB6Ng01-204J16.g
ACCGA024502GA024503
length5161,028
definitionB6Ng01-204J16.b B6Ng01-204J16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,810,373 - 13,810,892)(13,692,223 - 13,693,248)
sequence
tctgtaccccatttttaatagggttacttaatttacttttgtcttttcac
ctctccttatttctcatgtttaaatttatgtaacttatttctgatgatat
taattttatatatgtgtagctaacatgcttcatatcgaggtccataattc
atatttttggatgtctcaaatattcattcaattatactttggtgaggttt
caccatcaagactttgaatataatgatgtagatagagattatacattgat
tttgcaaagttcaggcttagaaattacaaagatgaagaaaacatataagt
gaaacaagaatgtaaagtaggcacaatgaacaatattttagaaagcatga
aagttaaatgcatgaggtgttccaggggaagattcccaggaagaagataa
gctcagtgcggtaatagtaacatagatagaaggtactactttaagtaggt
tgctcataatagggaatatattgtgagctgagaggtgctacttagaggat
taagtagatgtacaat
gaattccactctaaagacttttgatcctggtgtgatggtttaattctaga
gggagaccatgttctaattttctaatgtttaaaatattctacaggatcag
agaacctcatctcacttttaatttcagaaagttgtagaactttccatatc
tatttaactatatcatttactaggttccttttcctgagagtatcaacttt
tagacagaaatattatgagctgccattcagaagacaccaggaaaagctaa
gcaaacattggaaaggtaatggctatgacttacatgattttgcacagtta
ccaccctacttacttgcaaaagattacacattcattgcaatataactaca
ggtatatcccatgaagagaaaggatgatttgcctattgtttatttaaatg
aataaggttatattatctcatgccttgaatataagaggttattaacgtgg
agaaataagtatgcctaagattttcaaattggaagtagctctctattaag
gagcctcatatgaaattatagttgcattttcaggtgtcacatgatccacc
acagtaatggcacaacaagatgcaccttgtaatatactatatttgaggtt
acacattgtgtagaaagagcaaaaatagctatactttagtgtttacacaa
atatagcaaacttgtgttgcagtaatagaaaataggagcacatgtaaaat
aaaataaagcctattagatgtaatgaaagcatttaaaaataatctaacat
ttcaaaaattatgaccttagtttgtcaaacaaatgataactgtgatatat
tttaactttataatgaacatgtttcatacatcaggaagttatcattttag
ttcaaagttaaaaagaaaaaattaatgaaagatcttagcaattagatata
aaactgagtactcatgctgtggcacctaaaattactgcattggcacaact
tagtggtgttaaatcttatgggaagtattagagatgggaaacacaataga
taggggttgtaggacaaaagggcaaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_13810373_13810892
seq2: B6Ng01-204J16.b_36_557 (reverse)

seq1  ATTGTACATCTACTT-ATCCTCTAGGTAGCACCTCTCAGCTCACAATGTA  49
      ||||||||||||||| |||||||| |||||||||||||||||||||| ||
seq2  ATTGTACATCTACTTAATCCTCTAAGTAGCACCTCTCAGCTCACAATATA  50

seq1  TTCCCTATTATGAGCAACCTACTTAAAGTAGTACCTTCTATCTATGTTAC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTATTATGAGCAACCTACTTAAAGTAGTACCTTCTATCTATGTTAC  100

seq1  TATTACCGCACTGTGCTTCTCTTCTTCCTGGGAATCTTCCCCTGGAACAC  149
      ||||||||||||| |||| |||||||||||||||||||||||||||||||
seq2  TATTACCGCACTGAGCTTATCTTCTTCCTGGGAATCTTCCCCTGGAACAC  150

seq1  CTCATGCATTTAACTTTCATGCTTTCTAAAATATTGTTCATTGTGCCTAC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGCATTTAACTTTCATGCTTTCTAAAATATTGTTCATTGTGCCTAC  200

seq1  TTTACCTTCTTGTTTCACTTATATGTTTTCTTCTTCTTTGTAATTTCTAA  249
      ||||| ||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTTACATTCTTGTTTCACTTATATGTTTTCTTCATCTTTGTAATTTCTAA  250

seq1  GCCTGAACTTTGCAAAATCTATGTATAATCTCTATCTACATCATTATATT  299
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GCCTGAACTTTGCAAAATCAATGTATAATCTCTATCTACATCATTATATT  300

seq1  CAAAGTCTTGATGGTGAAACCTCACCAAAGTATAATTGAATGAATATTTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTCTTGATGGTGAAACCTCACCAAAGTATAATTGAATGAATATTTG  350

seq1  TGACATCCAAAAATATGAATTATGGACCTCGATATGAAGCATGTTAGCTA  399
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATCCAAAAATATGAATTATGGACCTCGATATGAAGCATGTTAGCTA  400

seq1  CACATATATAAAATTAATATCATCAGAAATAAGTTACATAAATTTAAACA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATATATAAAATTAATATCATCAGAAATAAGTTACATAAATTTAAACA  450

seq1  TGAGAAATAAGGAGAGGTGAAAAGACAAAAGT-GATTAAGTAACCCTATT  498
      ||||||||||||||||||||||||||||||||  ||||||||||||||||
seq2  TGAGAAATAAGGAGAGGTGAAAAGACAAAAGTAAATTAAGTAACCCTATT  500

seq1  AAAAATGGGGTACAGAGAATTC  520
      ||||||||||||||||||||||
seq2  AAAAATGGGGTACAGAGAATTC  522

seq1: chr19_13692223_13693248
seq2: B6Ng01-204J16.g_70_1097

seq1  GAATTCCACTCTAAAGACTTTTGATCCTGGTGTGATGGTTTAATTCTAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTCTAAAGACTTTTGATCCTGGTGTGATGGTTTAATTCTAGA  50

seq1  GGGAGACCATGTTCTAATTTTCTAATGTTTAAAATATTCTACAGGATCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGACCATGTTCTAATTTTCTAATGTTTAAAATATTCTACAGGATCAG  100

seq1  AGAACCTCATCTCACTTTTAATTTCAGAAAGTTGTAGAACTTTCCATATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCTCATCTCACTTTTAATTTCAGAAAGTTGTAGAACTTTCCATATC  150

seq1  TATTTAACTATATCATTTACTAGGTTCCTTTTCCTGAGAGTATCAACTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAACTATATCATTTACTAGGTTCCTTTTCCTGAGAGTATCAACTTT  200

seq1  TAGACAGAAATATTATGAGCTGCCATTCAGAAGACACCAGGAAAAGCTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAGAAATATTATGAGCTGCCATTCAGAAGACACCAGGAAAAGCTAA  250

seq1  GCAAACATTGGAAAGGTAATGGCTATGACTTACATGATTTTGCACAGTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACATTGGAAAGGTAATGGCTATGACTTACATGATTTTGCACAGTTA  300

seq1  CCACCCTACTTACTTGCAAAAGATTACACATTCATTGCAATATAACTACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCTACTTACTTGCAAAAGATTACACATTCATTGCAATATAACTACA  350

seq1  GGTATATCCCATGAAGAGAAAGGATGATTTGCCTATTGTTTATTTAAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATATCCCATGAAGAGAAAGGATGATTTGCCTATTGTTTATTTAAATG  400

seq1  AATAAGGTTATATTATCTCATGCCTTGAATATAAGAGGTTATTAACGTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGGTTATATTATCTCATGCCTTGAATATAAGAGGTTATTAACGTGG  450

seq1  AGAAATAAGTATGCCTAAGATTTTCAAATTGGAAGTAGCTCTCTATTAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATAAGTATGCCTAAGATTTTCAAATTGGAAGTAGCTCTCTATTAAG  500

seq1  GAGCCTCATATGAAATTATAGTTGCATTTTCAGGTGTCACATGATCCACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTCATATGAAATTATAGTTGCATTTTCAGGTGTCACATGATCCACC  550

seq1  ACAGTAATGGCACAACAAGATGCACCTTGTAATATACTATATTTGAGGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAATGGCACAACAAGATGCACCTTGTAATATACTATATTTGAGGTT  600

seq1  ACACATTGTGTAGAAAGAGCAAAAATAGCTATACTTTAGTGTTTACACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATTGTGTAGAAAGAGCAAAAATAGCTATACTTTAGTGTTTACACAA  650

seq1  ATATAGCAAACTTGTGTTGCAGTAATAGAAAATAGGAGCACATGTAAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGCAAACTTGTGTTGCAGTAATAGAAAATAGGAGCACATGTAAAAT  700

seq1  AAAATAAAGCCTATTAGATGTAATGAAAGCATTTAAAAATAATCTAACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAGCCTATTAGATGTAATGAAAGCATTTAAAAATAATCTAACAT  750

seq1  TTCAAAAATTATGACCTTAGTTTGTCAAACAAATGATAACTGTGATATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAAATTATGACCTTAGTTTGTCAAACAAATGATAACTGTGATATAT  800

seq1  TTAAACTTTATAATGAACATGTTTCATACATCAGGAAGTTATCA-TTTAG  849
      || ||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTTAACTTTATAATGAACATGTTTCATACATCAGGAAGTTATCATTTTAG  850

seq1  TTCAAAGTTAAAAAGAAAAAATTAATGAAAGATCTTAGCAAATTAGATAT  899
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TTCAAAGTTAAAAAGAAAAAATTAATGAAAGATCTTAGC-AATTAGATAT  899

seq1  AAAACTGAGTACTCATGCTGTGGCACCTAAAATTACTGCATTGGCACAAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGAGTACTCATGCTGTGGCACCTAAAATTACTGCATTGGCACAAC  949

seq1  -TAGT-GTGTTAAACCTAAT-GGAAGTATTAGAGATGGGAAACACAATAG  996
       |||| |||||||| || || |||||||||||||||||||||||||||||
seq2  TTAGTGGTGTTAAATCTTATGGGAAGTATTAGAGATGGGAAACACAATAG  999

seq1  ATAGGGTTTGTTAAGAACAAAA-GGCAAAGA  1026
      |||||| ||||  || |||||| ||||||||
seq2  ATAGGGGTTGT--AGGACAAAAGGGCAAAGA  1028