BAC Information

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BAC

Clone NameB6Ng01-209D09
Chromosome19 (Build37)
Map Location 32,201,553 - 32,202,731
singlet/doubletsinglet
Overlap geneSgms1
Upstream genePrkg1, 8430431K14Rik, 1810073H04Rik, Asah2, EG668042
Downstream gene2700046G09Rik, LOC100042138, LOC672490, LOC100042823, Minpp1, Papss2, Atad1, Pten, B430203M17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-209D09.bB6Ng01-209D09.g
ACCGA027887GA027888
length1,170151
definitionB6Ng01-209D09.b B6Ng01-209D09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaacaacacatataaacatgttctgttgctttctgctctcaggt
tgttttgagacatgaaacctggttcatccattttaattgctgttaggatt
tcagccctgtaattgaacaacagattacttccctggaaaattcagttatt
cataatttcactgttagaagctgttcagtaaggcagagtgttagacaacc
ggggggacacagaggatggacacagaccacagtatggagttaggagcatt
gtagctcttgaaatgtgtctgctgggagctgggagtagtcctgaagaaga
aaatggacaggaagcagcgcccaggtcagaaagagcccgagccacaaagc
agaggcttggcttctgtctgcggcagatggggacacttagagtggttggg
aacaaggggacagtgtcagctgagttttccttcagagaagtagctttcaa
gaagttctagagagaacaggctagagaccaagagacagtcctcagcttct
gatgcaggtatgcagaggaggtgtggcctgacctgtccgtcacccttggg
gtaaagtgcaggccatggaagagcttggtgaccacacacaggacaggcaa
tacggaggagacaggaggacgcaggctgcccaaccctgtcgtgaaccaga
aggaaccgttatgaagtgagatgttctgcaggggcctgagagagagggag
aagagatgtcctgtttatttactgtgtgatcgactgcagtgaattctaga
aatgtctatccacagggcatctgacctttataccacaacataaccagcca
taggaagtggaaactttaggagtcagttgctatagggcccttgggaataa
agggtgctcgccccctactggttcacacctgaaattgtttttcatgttac
tggacagtgcggagaccttgcaggagtcacaaaaccctgatttgggatcc
tggaactatcggcccctccccgaattctgactgtggggaaaatgtttaat
ctctatatgtcttttgtttcctcattctttaaatgagtctttatttcatg
agtgagaagagctataaaagtaaaatagtgtggtgcatgaatacgccagt
tgagtccacgaaaaattgtagtagcttgtctgttcatgtacggtatgata
tgatgtccagttctgccccc
aagagtattcaggaggctaagacagaaagataatgagtttgaggctagct
aagctacatagtgaactcaaggccaacctgacctacatcgtgagtccctg
gggaaggagggagtagagagaagggaaagggaaagaatagtgggagaggg
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_32201553_32202731
seq2: B6Ng01-209D09.b_44_1213 (reverse)

seq1  GGGGGCAGAAACTGGCCACTCATATTCATACCTTAACAATACACCAAGAA  50
      |||||||| |||||| || ||||| ||||||| ||   ||  ||  ||| 
seq2  GGGGGCAG-AACTGGACA-TCATA-TCATACCGTA--CATGAAC--AGAC  43

seq1  CAGCTACTACACATTTTCTGTGAACCTCACT-GCGTATCCATGCACACCA  99
       |||||||||| |||||  ||| ||   ||| |||||| |||||||  ||
seq2  AAGCTACTACA-ATTTTTCGTGGACTCAACTGGCGTATTCATGCACCACA  92

seq1  CTTATTTTACTTTTTATAGCCTCTTCCTCACTCATGAAATAAAGACTCAT  149
      | |||||||| |||||||| ||||| ||||||||||||||||||||||||
seq2  C-TATTTTAC-TTTTATAG-CTCTT-CTCACTCATGAAATAAAGACTCAT  138

seq1  TTTAAAGATGAGGAAAC-AAAGACATATAGAGATTAAACATTTTCCCCAC  198
      || ||  |||||||||| ||||||||||||||||||||||||||||||||
seq2  TTAAAGAATGAGGAAACAAAAGACATATAGAGATTAAACATTTTCCCCAC  188

seq1  AGTCAGAATTCGGGGAGGGGCCGATAGTTCCAGGATCCCAAATCAGGGTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGAATTCGGGGAGGGGCCGATAGTTCCAGGATCCCAAATCAGGGTT  238

seq1  TTGTGACTCCTGCAAGGTCTCCGCACTGTCCAGTAACATGAAAAACAATT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGACTCCTGCAAGGTCTCCGCACTGTCCAGTAACATGAAAAACAATT  288

seq1  TCAGGTGTGAACCAGTAGGGGGCGAGCACCC-TTATTCCCAAGGGCCCTA  347
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TCAGGTGTGAACCAGTAGGGGGCGAGCACCCTTTATTCCCAAGGGCCCTA  338

seq1  TAGCAACTGACTCCTAAAGTTTCCACTTCCTATGGCTGGTTATGTTGTGG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAACTGACTCCTAAAGTTTCCACTTCCTATGGCTGGTTATGTTGTGG  388

seq1  TATAAAGGTCAGATGCCCTGTGGATAGACATTTCTAGAATTCACTGCAGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGGTCAGATGCCCTGTGGATAGACATTTCTAGAATTCACTGCAGT  438

seq1  CGATCACACAGTAAATAAACAGGACATCTCTTCTCCCTCTCTCTCAGGCC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATCACACAGTAAATAAACAGGACATCTCTTCTCCCTCTCTCTCAGGCC  488

seq1  CCTGCAGAACATCTCACTTCATAACGGTTCCTTCTGGTTCACGACAGGGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAGAACATCTCACTTCATAACGGTTCCTTCTGGTTCACGACAGGGT  538

seq1  TGGGCAGCCTGCGTCCTCCTGTCTCCTCCGTATTGCCTGTCCTGTGTGTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAGCCTGCGTCCTCCTGTCTCCTCCGTATTGCCTGTCCTGTGTGTG  588

seq1  GTCACCAAGCTCTTCCATGGCCTGCACTTTACCCCAAGGGTGACGGACAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCAAGCTCTTCCATGGCCTGCACTTTACCCCAAGGGTGACGGACAG  638

seq1  GTCAGGCCACACCTCCTCTGCATACCTGCATCAGAAGCTGAGGACTGTCT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGCCACACCTCCTCTGCATACCTGCATCAGAAGCTGAGGACTGTCT  688

seq1  CTTGGTCTCTAGCCTGTTCTCTCTAGAACTTCTTGAAAGCTACTTCTCTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTCTCTAGCCTGTTCTCTCTAGAACTTCTTGAAAGCTACTTCTCTG  738

seq1  AAGGAAAACTCAGCTGACACTGTCCCCTTGTTCCCAACCACTCTAAGTGT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAACTCAGCTGACACTGTCCCCTTGTTCCCAACCACTCTAAGTGT  788

seq1  CCCCATCTGCCGCAGACAGAAGCCAAGCCTCTGCTTTGTGGCTCGGGCTC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATCTGCCGCAGACAGAAGCCAAGCCTCTGCTTTGTGGCTCGGGCTC  838

seq1  TTTCTGACCTGGGCGCTGCTTCCTGTCCATTTTCTTCTTCAGGACTACTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGACCTGGGCGCTGCTTCCTGTCCATTTTCTTCTTCAGGACTACTC  888

seq1  CCAGCTCCCAGCAGACACATTTCAAGAGCTACAATGCTCCTAACTCCATA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTCCCAGCAGACACATTTCAAGAGCTACAATGCTCCTAACTCCATA  938

seq1  CTGTGGTCTGTGTCCATCCTCTGTGTCCCCCCGGTTGTCTAACACTCTGC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGTCTGTGTCCATCCTCTGTGTCCCCCCGGTTGTCTAACACTCTGC  988

seq1  CTTACTGAACAGCTTCTAACAGTGAAATTATGAATAACTGAATTTTCCAG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTGAACAGCTTCTAACAGTGAAATTATGAATAACTGAATTTTCCAG  1038

seq1  GGAAGTAATCTGTTGTTCAATTACAGGGCTGAAATCCTAACAGCAATTAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTAATCTGTTGTTCAATTACAGGGCTGAAATCCTAACAGCAATTAA  1088

seq1  AATGGATGAACCAGGTTTCATGTCTCAAAACAACCTGAGAGCAGAAAGCA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGATGAACCAGGTTTCATGTCTCAAAACAACCTGAGAGCAGAAAGCA  1138

seq1  ACAGAACATGTTTATATGTGTTGTTTGAATTC  1179
      ||||||||||||||||||||||||||||||||
seq2  ACAGAACATGTTTATATGTGTTGTTTGAATTC  1170