BAC Information

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BAC

Clone NameB6Ng01-210B15
Chromosome19 (Build37)
Map Location 38,937,525 - 38,938,618
singlet/doubletsinglet
Overlap geneTbc1d12
Upstream geneLOC209281, Fer1l3, Cep55, Gpr120, Rbp4, Pde6c, 5730455O13Rik, Lgi1, Tmem20, LOC100042483, Plce1, EG667587, Noc3l
Downstream geneHells, LOC209753, Cyp2c55, LOC100042507, Cyp2c65, LOC668278, Cyp2c66, Cyp2c29, Cyp2c38, Cyp2c39, C730004C24Rik, 9030012A22Rik, Cyp2c40, LOC100043108
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210B15.b
ACCGA028532
length1,084
definitionB6Ng01-210B15.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggttgtcaagcttgacagcaagtgcttttccccactaaggcat
ctcacttgcccagtgattgactagtttaaatgtttgatatatggacacac
tttattaactatgcctcacggctcacattcatcttccaaaatatgttctg
tagtaatagaaatctttcagtgtttctttttttaaaatgaactttgttca
tctttctcagtagagggcacctgggggaggatggtggctgatgaagggcc
tcctgtggtgtctagctgctgcacaatgggcaatgatacggccatggtac
atccagggggcatatgcccagactttgtagtctctcacagaactgacagg
ctcagcctggagacggcatccctgcatctctctgcacctggaaactgatg
gcaccaaagacctatcaacaccagcttgccagttctcaatccagttgcca
caaagtcacctgtgccttggccccaggcaactctgctgggctctcttccc
attatgttcctttcattccaaaagtcctccttcggtccacattaataaac
agaaggaaacctctgttgtcatagtttatgtaaagaactgttggaagtga
caccaagaggaaaattcgtaaaataaaaatgattctgagctgaaccttat
caaatttaaatatctgtacttcaaaacacatcactaccacaaagtggaca
gcatatgaaatttagatcatctctgccaccaaagtagaactaaacatgaa
ataaccttagaacttcagagctttatcagatatttttaataaccagatag
agaagacgactgatatttttaaacacaaaccatttaccacaccccatcca
ctagagcagccccttctactccttgtgacagtggagtggttgaccagtac
taggaaaagagtggatgacagccttcaaatcatggcactgtgcacagtgt
gggctggagcaacctggccctggcacagaacatgagcatctgtttcactt
ttgccccagcagcaggttgtgtggctatcaatcactaaatgagaagatct
ttgcatccactttggaggccagaatgtagaaaaa
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_38937525_38938618
seq2: B6Ng01-210B15.b_46_1129 (reverse)

seq1  TTTTTCTTACACTTCTGGCTTCAAAAGTGGGATTGCAAAGATTCCTTCCT  50
      |||||| |||| ||||||| || |||||||   |||||||||  ||| ||
seq2  TTTTTC-TACA-TTCTGGCCTCCAAAGTGG--ATGCAAAGAT--CTT-CT  43

seq1  CATTTAGTGATTTGATAGCCACACAAACTGCTGCTGGGGCAAAAGTGAAA  100
      |||||||||| ||||||||||||||| |||||||||||||||||||||||
seq2  CATTTAGTGA-TTGATAGCCACACAACCTGCTGCTGGGGCAAAAGTGAAA  92

seq1  CAGATGCTCATG-TCTGTGCCAGGGCCCAGGTTGCTCCCAGCCCAACACT  149
      |||||||||||| |||||||||||| |||||||||| ||||||| |||||
seq2  CAGATGCTCATGTTCTGTGCCAGGG-CCAGGTTGCT-CCAGCCC-ACACT  139

seq1  GTGCACAGTGCCATGATTTGAAGGCTGTCATCCACTCTTTTCCTAGTACT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACAGTGCCATGATTTGAAGGCTGTCATCCACTCTTTTCCTAGTACT  189

seq1  GGTCAACCACTCCACTGTCACAAGGAGTAGAAGGGGCTGCTCTAGTGGAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAACCACTCCACTGTCACAAGGAGTAGAAGGGGCTGCTCTAGTGGAT  239

seq1  GGGGTGTGGTAAATGGTTTGTGTTTAAAAATATCAGTCGTCTTCTCTATC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGTGGTAAATGGTTTGTGTTTAAAAATATCAGTCGTCTTCTCTATC  289

seq1  TGGTTATTAAAAATATCTGATAAAGCTCTGAAGTTCTAAGGTTATTTCAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTATTAAAAATATCTGATAAAGCTCTGAAGTTCTAAGGTTATTTCAT  339

seq1  GTTTAGTTCTACTTTGGTGGCAGAGATGATCTAAATTTCATATGCTGTCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGTTCTACTTTGGTGGCAGAGATGATCTAAATTTCATATGCTGTCC  389

seq1  ACTTTGTGGTAGTGATGTGTTTTGAAGTACAGATATTTAAATTTGATAAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGTGGTAGTGATGTGTTTTGAAGTACAGATATTTAAATTTGATAAG  439

seq1  GTTCAGCTCAGAATCATTTTTATTTTACGAATTTTCCTCTTGGTGTCACT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGCTCAGAATCATTTTTATTTTACGAATTTTCCTCTTGGTGTCACT  489

seq1  TCCAACAGTTCTTTACATAAACTATGACAACAGAGGTTTCCTTCTGTTTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACAGTTCTTTACATAAACTATGACAACAGAGGTTTCCTTCTGTTTA  539

seq1  TTAATGTGGACCGAAGGAGGACTTTTGGAATGAAAGGAACATAATGGGAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGTGGACCGAAGGAGGACTTTTGGAATGAAAGGAACATAATGGGAA  589

seq1  GAGAGCCCAGCAGAGTTGCCTGGGGCCAAGGCACAGGTGACTTTGTGGCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCCCAGCAGAGTTGCCTGGGGCCAAGGCACAGGTGACTTTGTGGCA  639

seq1  ACTGGATTGAGAACTGGCAAGCTGGTGTTGATAGGTCTTTGGTGCCATCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGATTGAGAACTGGCAAGCTGGTGTTGATAGGTCTTTGGTGCCATCA  689

seq1  GTTTCCAGGTGCAGAGAGATGCAGGGATGCCGTCTCCAGGCTGAGCCTGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCAGGTGCAGAGAGATGCAGGGATGCCGTCTCCAGGCTGAGCCTGT  739

seq1  CAGTTCTGTGAGAGACTACAAAGTCTGGGCATATGCCCCCTGGATGTACC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCTGTGAGAGACTACAAAGTCTGGGCATATGCCCCCTGGATGTACC  789

seq1  ATGGCCGTATCATTGCCCATTGTGCAGCAGCTAGACACCACAGGAGGCCC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCGTATCATTGCCCATTGTGCAGCAGCTAGACACCACAGGAGGCCC  839

seq1  TTCATCAGCCACCATCCTCCCCCAGGTGCCCTCTACTGAGAAAGATGAAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCAGCCACCATCCTCCCCCAGGTGCCCTCTACTGAGAAAGATGAAC  889

seq1  AAAGTTCATTTTAAAAAAAGAAACACTGAAAGATTTCTATTACTACAGAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTCATTTTAAAAAAAGAAACACTGAAAGATTTCTATTACTACAGAA  939

seq1  CATATTTTGGAAGATGAATGTGAGCCGTGAGGCATAGTTAATAAAGTGTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTTGGAAGATGAATGTGAGCCGTGAGGCATAGTTAATAAAGTGTG  989

seq1  TCCATATATCAAACATTTAAACTAGTCAATCACTGGGCAAGTGAGATGCC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATATATCAAACATTTAAACTAGTCAATCACTGGGCAAGTGAGATGCC  1039

seq1  TTAGTGGGGAAAAGCACTTGCTGTCAAGCTTGACAACCTGAATTC  1094
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGGGGAAAAGCACTTGCTGTCAAGCTTGACAACCTGAATTC  1084