BAC Information

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BAC

Clone NameB6Ng01-210J14
Chromosome19 (Build37)
Map Location 33,805,244 - 33,806,375
singlet/doubletsinglet
Overlap geneEG668114
Upstream genePten, B430203M17Rik, 6530404N21Rik, LOC638381, EG668095, LOC628236, AI747699, EG668106, EG668112
Downstream geneEG329055, EG433241, LOC668127, Lipf, Lipk, EG383462, Lipn, Ankrd22, Stambpl1, Acta2, Fas, Ch25h, Lipa, Ifit2, Ifit3, OTTMUSG00000016644, LOC667370, 2010002M12Rik, Ifit1, Slc16a12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210J14.bB6Ng01-210J14.g
ACCGA028899GA028900
length1,132853
definitionB6Ng01-210J14.b B6Ng01-210J14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagattagattctctggagatctttgaatttcaactccttctcct
tctacatagtgctttgaactttactaaatcccatttgtctataaggatta
caaagctgggaattctctttggacaacagatgtgcaatgtaacactcagc
tagttagagtcatatttttcatcttacagtctctcacagcctgctatgca
gttttgagaattcttgttttgtatgtgttttgtgtgtgtttcaatatctg
acatcattactacatgaagctgccactgtctccttcgcccagcatctcga
atcacctgtgtgtctactaaagttgttgaacttaattatttcatctcgat
ggaatcaagtgcattggggtcctctatcttggctatgagataaatatcat
tagttcatctatggtgtagcattacaggaacatcttctgtgaaagaattg
aaatctcttgtgtaaatgtaagacattccattaatctgtataccaccact
gacagagttttcagtgtttttttttttcctggtttgctaatttgcaagtt
tttgtatggacatgttttcattctatgctaagcatacttcaaaatatagc
caattctataaagagtttggttcaacaagtctatcagacattaaccctaa
ataaaccctccccaataaagaaagagaaagattgctctcaccccaaaatg
ttcatgattcccaaaagtttacattcaatttaatctgattaaaaatgttc
ctatcatatttgggagtgttgtttctcaagttaggtactgaatgtcatat
tcagtgaagtaagccaatccacttcagcagcacatagtagttttgtcttt
tgtctcactccatataaacattatgcttctatcaggcaaaacactttctc
acactaagagcttgctcttcacatttgtcaatttcagctcctctttggtg
gaaaaagaatttttgcctaccgtagttttcagtgaggtggggtgcatgtg
tttgcaaatataactttcttcactgctaatatgtgctgctatcatggatc
gatgggtgattatttctccagaggagttaataaggtagtgtctttctttc
aaaattcatcatggtgtgtggtgtgtgtgtgt
gaattcagagctggagaagtaacctaagccctttggagcaggacagaaca
tcactacgtggatctcagacactggaacaagactgtttaaagttgaagtt
gcctttggatagcccaagatgctagagatatcatagctgtgggacatttg
cctagggaagctgcaaactgggagtggaaaaacccgaagagaaagaagtt
tgttgtagtcaataaagatgaaagaatttcaagatatgatgtgtagtttt
ccatcagacatggttatgccagagttttgagtttgctcagatgttttttg
tcttgctgtggtctagtattccctcactatgatttttttggactagtaat
atatatcctgtgttgttggaggtatgtgatctgatttttcatgttgactt
tataggggattacagaaaaatgattagaggactctcagaagagactttga
actttggactttcatcattgttgagactactatagaccatggagtctatt
gaagtatttaccttatgctatgtctaggtatagtccccagagactcttgt
ttttgaacaagcctggtgaggttagggagtggagtgtggtagtttgacta
tgcttggcctgtaggaagtgacattgttaggaggcatgaccttattggag
gaagtatgtcattgtggtgcaaggctttgagaatgtccttgtagcttcct
cagacaatcttcccctctttgccttcagagccagatatagaactctcagc
tcttccgcaccatggatcttgccatgcttcctgcctttatgaaaggggaa
tgaatctctggtacagcaagacagtctcaaattttgccctttataacaat
tgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_33805244_33806375
seq2: B6Ng01-210J14.b_42_1173 (reverse)

seq1  ACACACACACACACACACACCAATGATGAA-TTTGAAAGAAAAGAACACC  49
      |||||||||||| |||||||| |||||||| |||||||||||   ||| |
seq2  ACACACACACAC-CACACACC-ATGATGAATTTTGAAAGAAA--GACA-C  45

seq1  TACCTTATTTAACTCCTCTGGAG-AATATCCACCCATCGATCCCATGATA  98
      ||||||| ||||||||||||||| ||||  ||||||||||| ||||||||
seq2  TACCTTA-TTAACTCCTCTGGAGAAATAATCACCCATCGAT-CCATGATA  93

seq1  GCAGCACATA-TAGCAGTGAAG-AAGTTAATATTGCAAACACATGCA-CC  145
      |||||||||| ||||||||||| ||||||   ||||||||||||||| ||
seq2  GCAGCACATATTAGCAGTGAAGAAAGTTATATTTGCAAACACATGCACCC  143

seq1  CACCTCACTGAAAACTACGGTAGGCAAAAATTCTTTTT-CACCAAAGAGG  194
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CACCTCACTGAAAACTACGGTAGGCAAAAATTCTTTTTCCACCAAAGAGG  193

seq1  AGCTGAAATTGACAAATGTGAAGAGC-AGCTCTTAGTGTGAGAAAGTGTT  243
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AGCTGAAATTGACAAATGTGAAGAGCAAGCTCTTAGTGTGAGAAAGTGTT  243

seq1  TTGCCTGATAGAAGCATAATGTTTATATGGAGTGAGACAAAAGACAAAAC  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTGATAGAAGCATAATGTTTATATGGAGTGAGACAAAAGACAAAAC  293

seq1  TACTATGTGCTGCTGAAGTGGATTGGCTTACTTCACTGAATATGACATTC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATGTGCTGCTGAAGTGGATTGGCTTACTTCACTGAATATGACATTC  343

seq1  AGTACCTAACTTGAGAAACAACACTCCCAAATATGATAGGAACATTTTTA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCTAACTTGAGAAACAACACTCCCAAATATGATAGGAACATTTTTA  393

seq1  ATCAGATTAAATTGAATGTAAACTTTTGGGAATCATGAACATTTTGGGGT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGATTAAATTGAATGTAAACTTTTGGGAATCATGAACATTTTGGGGT  443

seq1  GAGAGCAATCTTTCTCTTTCTTTATTGGGGAGGGTTTATTTAGGGTTAAT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCAATCTTTCTCTTTCTTTATTGGGGAGGGTTTATTTAGGGTTAAT  493

seq1  GTCTGATAGACTTGTTGAACCAAACTCTTTATAGAATTGGCTATATTTTG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGATAGACTTGTTGAACCAAACTCTTTATAGAATTGGCTATATTTTG  543

seq1  AAGTATGCTTAGCATAGAATGAAAACATGTCCATACAAAAACTTGCAAAT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATGCTTAGCATAGAATGAAAACATGTCCATACAAAAACTTGCAAAT  593

seq1  TAGCAAACCAGGAAAAAAAAAAACACTGAAAACTCTGTCAGTGGTGGTAT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAACCAGGAAAAAAAAAAACACTGAAAACTCTGTCAGTGGTGGTAT  643

seq1  ACAGATTAATGGAATGTCTTACATTTACACAAGAGATTTCAATTCTTTCA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATTAATGGAATGTCTTACATTTACACAAGAGATTTCAATTCTTTCA  693

seq1  CAGAAGATGTTCCTGTAATGCTACACCATAGATGAACTAATGATATTTAT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGATGTTCCTGTAATGCTACACCATAGATGAACTAATGATATTTAT  743

seq1  CTCATAGCCAAGATAGAGGACCCCAATGCACTTGATTCCATCGAGATGAA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATAGCCAAGATAGAGGACCCCAATGCACTTGATTCCATCGAGATGAA  793

seq1  ATAATTAAGTTCAACAACTTTAGTAGACACACAGGTGATTCGAGATGCTG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTAAGTTCAACAACTTTAGTAGACACACAGGTGATTCGAGATGCTG  843

seq1  GGCGAAGGAGACAGTGGCAGCTTCATGTAGTAATGATGTCAGATATTGAA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGAAGGAGACAGTGGCAGCTTCATGTAGTAATGATGTCAGATATTGAA  893

seq1  ACACACACAAAACACATACAAAACAAGAATTCTCAAAACTGCATAGCAGG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACAAAACACATACAAAACAAGAATTCTCAAAACTGCATAGCAGG  943

seq1  CTGTGAGAGACTGTAAGATGAAAAATATGACTCTAACTAGCTGAGTGTTA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAGAGACTGTAAGATGAAAAATATGACTCTAACTAGCTGAGTGTTA  993

seq1  CATTGCACATCTGTTGTCCAAAGAGAATTCCCAGCTTTGTAATCCTTATA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCACATCTGTTGTCCAAAGAGAATTCCCAGCTTTGTAATCCTTATA  1043

seq1  GACAAATGGGATTTAGTAAAGTTCAAAGCACTATGTAGAAGGAGAAGGAG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAATGGGATTTAGTAAAGTTCAAAGCACTATGTAGAAGGAGAAGGAG  1093

seq1  TTGAAATTCAAAGATCTCCAGAGAATCTAATCTGAATTC  1132
      |||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATTCAAAGATCTCCAGAGAATCTAATCTGAATTC  1132