BAC Information

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BAC

Clone NameB6Ng01-211H04
Chromosome19 (Build37)
Map Location 11,650,625 - 11,651,768
singlet/doubletsinglet
Overlap genenone
Upstream geneTmem138, Cybasc3, Dak, Ddb1, Vwce, Pga5, 2210404E10Rik, Vps37c, Cd5, Cd6, Slc15a3, Tmem132a, Tmem109, Prpf19, Zp1, Gpr44, Ccdc86, Ms4a10, E530011F12Rik, 5033428B15Rik, AW112010, Ms4a8a, Gm336, LOC624395, 1700025F22Rik, Ms4a13, Ms4a12, Ms4a1, Ms4a5, Gm1276, Ms4a7, Ms4a4a, LOC435588, Ms4a4c, LOC433221, Ms4a4b, Ms4a6c, EG666926, Ms4a6b, Ms4a4d, LOC100040454
Downstream geneMs4a6d, Ms4a2, Ms4a3, Plac1l, Oosp1, Gm97, Gif, EG666958, Mrpl16, Stx3, Olfr1417, Olfr1418, Olfr1419, EG622845, EG666985, Olfr1420, AV312086, Osbp, GA_x5J8B7W6KF8-6942124-6941700, Olfr1422-ps1, Olfr1423, Olfr1424, Olfr1425, Olfr1426, Olfr1427, Olfr1428, Olfr76, Olfr1555-ps1, Olfr1430-ps1, Olfr1431, Olfr1429-ps1, Olfr262, Olfr232, Olfr1433, Olfr1435-ps1, Olfr1436, Olfr1437, Olfr1438-ps1, Olfr1439-ps1, Olfr1440, Olfr1441, Pfpl, Mpeg1, Dtx4, EG625046, 4632417K18Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211H04.bB6Ng01-211H04.g
ACCGA029513GA029514
length1,0001,140
definitionB6Ng01-211H04.b B6Ng01-211H04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattggcatagaaaaagacttttaaacagaaccctgttagcatga
cactaagattaaaaaaaaaaaaaaagatgggagctcacgaaactgagatg
cttttgcaaaccaaagagcaccatcattgcaacagcctacagagtgggag
aagatttttacaaactacacatctggtagaggactaatatccaaaatata
tgaagaactcaaaaaactagatattgaggaaacaaataactcagtcaaaa
actggagtaaagatataaacagtgaattctcaaaagaggaaactcaagtg
gctgaaaaacagttaaagcaatgttcaaaatttttttaattgggtattta
tttcatttacatttccaatgctatcccaaaagtcccccacaccctccccc
acccactcccacttcttggccctggcattcccctgtactgaggcatataa
agtttgcatgaccaatgggcctctctttccactgatggccaactaggcca
tcttctgattcatatgcagctagagacatgagttccaggggggtattggt
tagttcatattgttgttccacctataggattgcagatcccttcagctcct
tgggtactttctctagctcctccattgggggccgtgtgacccatccaata
gctgactgtgagcatccacttctgtgtttgccaggccccggcataatctc
aaaagagacaactatatcagggtccttttagcaaaatcttgctagtgtat
gcaatagtatcagcgtttggaagctgattatgggatggatccctggatat
ggcagtctctagatggtccatcctttcgtctcagctccaaactttgtctc
tgtaactccttccatgggtgttttgttcccaattctaagaatgggcaaag
tgtccacactttggtcttcgttcttcttgagtttcatgcgtttagcaaat
tgtatcttatatcttgggtattctaagtttctcggctaatatccacttat

gaattctacacttggaagtaaattagagatcaaagttgtacaatgaatgt
cagagttagttacgttatttgctcagtgcttgtcttactagaacacacac
atgagcagaaaatatagcagctagagaaaacaggaaagaaaactaaccat
tattatagtggctgataaatgcatcatgagcaaaaacatgtaacaataac
aacacccccacaatacatatttctttggaaatatttagttttaattatgc
atataagtgtgtgactttgtgcaggtatgtgctattggagtccagaagag
ggtctcagacacttcctgcctctacacttgagctggagttacaggcaatt
gtgagcattctgatgagtagtgttgggactcaggtcctctgtatgagtca
tttgcattcttaattgcaggaccatctatccagcccatgttaagttgcta
aagaatagaaaaaggatttcaaagttataaaatgttaccatctctttagc
aacttaacatttggctttagcttttcttttacaaaattttgattacattt
ttcaaaaacaaacaaacaaaaagaatgttaaaaagagagggggataggct
actccagtcttatcctatgagcttagtgttctgatacagaaacatcggat
gaaattagagctatagtgcccctcaacagaggaatggatacagaaaatgt
ggtacatctacacaatggagtactactcagctattaaaaagaatgaattt
atgaaattcctagccaaatggatggacctggagggcatcatcctgagtga
ggtaacacattcacaaaggaactcacacaatatgtactcactgataagtg
gatattagcccaaaacctaggatacccaagatataagatataatttccta
aacacatgaaactcaagaaaaatgaagactgaagtgtggacactataccc
ctcccttagaagtgggaacaaaaacacccttggaaaggagttacagagaa
caaagtttggagctgagatgaaaagatggaccatgtagagactactatcc
aggatccaccccataatcagcatcaaacgctgacacattgcatacactag
cagattttatcgaagaccagaatgtagctgtctcttgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_11650625_11651768
seq2: B6Ng01-211H04.g_70_1209

seq1  GAATTCTACACTTGGAAGTAAATTAGAGATCAAAGTTGTACAATGAATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACACTTGGAAGTAAATTAGAGATCAAAGTTGTACAATGAATGT  50

seq1  CAGAGTTAGTTACGTTATTTGCTCAGTGCTTGTCTTACTAGAACACACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTTAGTTACGTTATTTGCTCAGTGCTTGTCTTACTAGAACACACAC  100

seq1  ATGAGCAGAAAATATAGCAGCTAGAGAAAACAGGAAAGAAAACTAACCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCAGAAAATATAGCAGCTAGAGAAAACAGGAAAGAAAACTAACCAT  150

seq1  TATTATAGTGGCTGATAAATGCATCATGAGCAAAAACATGTAACAATAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATAGTGGCTGATAAATGCATCATGAGCAAAAACATGTAACAATAAC  200

seq1  AACACCCCCACAATACATATTTCTTTGGAAATATTTAGTTTTAATTATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCCCCACAATACATATTTCTTTGGAAATATTTAGTTTTAATTATGC  250

seq1  ATATAAGTGTGTGACTTTGTGCAGGTATGTGCTATTGGAGTCCAGAAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAGTGTGTGACTTTGTGCAGGTATGTGCTATTGGAGTCCAGAAGAG  300

seq1  GGTCTCAGACACTTCCTGCCTCTACACTTGAGCTGGAGTTACAGGCAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCAGACACTTCCTGCCTCTACACTTGAGCTGGAGTTACAGGCAATT  350

seq1  GTGAGCATTCTGATGAGTAGTGTTGGGACTCAGGTCCTCTGTATGAGTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCATTCTGATGAGTAGTGTTGGGACTCAGGTCCTCTGTATGAGTCA  400

seq1  TTTGCATTCTTAATTGCAGGACCATCTATCCAGCCCATGTTAAGTTGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATTCTTAATTGCAGGACCATCTATCCAGCCCATGTTAAGTTGCTA  450

seq1  AAGAATAGAAAAAGGATTTCAAAGTTATAAAATGTTACCATCTCTTTAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATAGAAAAAGGATTTCAAAGTTATAAAATGTTACCATCTCTTTAGC  500

seq1  AACTTAACATTTGGCTTTAGCTTTTCTTTTACAAAATTTTGATTACATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAACATTTGGCTTTAGCTTTTCTTTTACAAAATTTTGATTACATTT  550

seq1  TTCAAAAACAAACAAACAAAAAGAATGTTAAAAAGAGAGGGGGATAGGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAAACAAACAAACAAAAAGAATGTTAAAAAGAGAGGGGGATAGGCT  600

seq1  ACTCCAGTCTTATCCTATGAGCTTAGTGTTCTGATACAGAAACATCGGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAGTCTTATCCTATGAGCTTAGTGTTCTGATACAGAAACATCGGAT  650

seq1  GAAATTAGAGCTATAGTGCCCCTCAACAGAGGAATGGATACAGAAAATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTAGAGCTATAGTGCCCCTCAACAGAGGAATGGATACAGAAAATGT  700

seq1  GGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTT  750

seq1  ATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGA  800

seq1  GGTAACACATTCACAAAGGAACTCACACAATATGTACTCACTGATAAGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAACACATTCACAAAGGAACTCACACAATATGTACTCACTGATAAGTG  850

seq1  GATATTAGCCCAAAACCTAGGATACCCAAGATATAAGATATAATTTCCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTAGCCCAAAACCTAGGATACCCAAGATATAAGATATAATTTCCTA  900

seq1  AACACATGAAACTCAAGAAAAATGAAGACTGAAGTGTGGACACTATACCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACATGAAACTCAAGAAAAATGAAGACTGAAGTGTGGACACTATACCC  950

seq1  CT-CCTTAGAAGTGGGAAC-AAAACACCCTTGG-AAGGAGTTACAGAG-A  996
      || |||||||||||||||| ||||||||||||| |||||||||||||| |
seq2  CTCCCTTAGAAGTGGGAACAAAAACACCCTTGGAAAGGAGTTACAGAGAA  1000

seq1  CAAAGTTTGGAGCTGAGATGAAAGGATGGACCATGTAGAGACTACCTTAT  1046
      ||||||||||||||||||||||| |||||||||||||||||||||  |||
seq2  CAAAGTTTGGAGCTGAGATGAAAAGATGGACCATGTAGAGACTAC--TAT  1048

seq1  CCAGGGATCCACCCCATAATCAGCATCCAAACGCTGACACCATTGCATAC  1096
      ||| |||||||||||||||||||||| |||||||||||| ||||||||||
seq2  CCA-GGATCCACCCCATAATCAGCAT-CAAACGCTGACA-CATTGCATAC  1095

seq1  ACTAGCAAGATTTTATCGAAAGGACCCAGATGTAGCTGTCTCTTGTGA  1144
      |||||| |||||||||||||  ||||   |||||||||||||||||||
seq2  ACTAGC-AGATTTTATCGAA--GACCAGAATGTAGCTGTCTCTTGTGA  1140