BAC Information

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BAC

Clone NameB6Ng01-211I04
Chromosome19 (Build37)
Map Location 37,978,326 - 37,979,427
singlet/doubletsinglet
Overlap geneFer1l3
Upstream geneFgfbp3, Btaf1, Cpeb3, March5, LOC668230, Ide, LOC100043010, Kif11, EG667490, LOC631069, Hhex, Exoc6, Cyp26c1, Cyp26a1, LOC668248, LOC668251, LOC209281
Downstream geneCep55, Gpr120, Rbp4, Pde6c, 5730455O13Rik, Lgi1, Tmem20, LOC100042483, Plce1, EG667587, Noc3l, Tbc1d12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211I04.bB6Ng01-211I04.g
ACCGA029561GA029562
length9011,117
definitionB6Ng01-211I04.b B6Ng01-211I04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttctttagctctgagccccattttttaatggggttatttgatt
ttctggagcccaccttcttgagttctttatatatattggatattagtccc
ctatctgatttaggataggtaaagattctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtatcagtgtctctggttttatgtgaagtttctttt
ttatttatttatttatttatttatttatttatttatttatttatttagta
tatgtaagtacactgtaactgtcctcagacactccagaagagggcatcag
attttgttatggatggttgtgagccaccatgtggttgctgggacccaaac
tcaggaccttaggaagagcagtcagtgctcttaaccactgagccatctcg
ccagcccttatgtgaagtttcttgatccacttagatttgaccttagtaca
aggagataggtatggatcgattcgcattcttctacatgataacaaccagt
tgtgccagcaccatttgttgaaaatgctgtctttcttcccactggatggt
tttagctcccttgtcgaagatcaagtgaccataggtgtgtgggttcattt
ctgggtcttcaattctattccattggtctacttgtctgtcgctataccag
taccatgcagtttttaatctcaattgctctgtagtacagctttaggtcag
gcatggcgattcccaccagaggttcttttatccttgagaagagtttttgc
t
gaattcaaggttatccttggccatatagcgaattagagggcaggctgggc
acagagagatcatcacatctctgcctgcatttccaagcaatctactttct
ctctcttcttggtgcttaggaactattgtcactaaccctctccttgctct
catcacttactaaggtcccctactcctctttgtctcctccttcctcacac
tgttcttttccctcagcccaccctcctccggccctgaggggctcaatgca
gcaacctacccaacccctccccttcttggcttgctctcttcctttccacg
tcttaaatccaatcttacccaggaagtctcctggctcttctgcagccctc
tgcacttcagctgaaggcaaagctcacctttcacccatcaccaaactatg
cacggctcctaaaccagggaaaataagctggcctcttgaagctcttcaca
gagtcctatatgaaactattcaggagctggagacgtaatgcctccctcca
agcctccgcagaaagtgcgtctctccagacaccctgatcctggctgggat
ttctcatttcctggtggggattttcttttgagttatgttctttaaaggtc
ctggttttggggtcactccaggagagagctgtactagcatggtcccgagg
agcatcccatgtttcaagcacctaattgtccttccccaaaggcaatgacc
tccattcagggtggctcagaaatcacaaactagtacctctcaaatacaga
ggtccctgagttcagtggaaatttttgtgtgtagatgtttaatcgcttgg
gatttatagcaggactgtttatgctcatgtctttgagaaaggacgcatgg
agtcctctgtgagacactgaacaatggatggctacttcttctgccatctc
ccattctatctggaaagaacttaaacattctagcattgatccctttttgc
ttaactcccccatcacctggtcaaaaatcactggtctggtgtccccttga
caagaacatccctgtcaacctccaaaccaatggctcaaccacttgaagct
aatctggaacctcatgtttgttttcttgggccaagttttctggaacctga
ctttacatcgtacgatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_37978326_37979427
seq2: B6Ng01-211I04.g_67_1183 (reverse)

seq1  GATCGTACGATGT-AAGTCAAGTTCCAGAAAACCTGG-CCAAGAACAC-A  47
      ||||||||||||| |||||| |||||||||||| ||| ||||||| || |
seq2  GATCGTACGATGTAAAGTCAGGTTCCAGAAAACTTGGCCCAAGAAAACAA  50

seq1  ACATGAGG-TCCAGATAAGCTTCAAGTGGTTGAGCCATT-GTTCTGAGGT  95
      |||||||| ||||||| |||||||||||||||||||||| |||  |||||
seq2  ACATGAGGTTCCAGATTAGCTTCAAGTGGTTGAGCCATTGGTTTGGAGGT  100

seq1  GAACA-GGATGTTCTTGTCCAGGGGACA-CAGA-CAGTGA-TTTTGAACA  141
        ||| ||||||||||||| |||||||| |||| |||||| |||||| ||
seq2  TGACAGGGATGTTCTTGTCAAGGGGACACCAGACCAGTGATTTTTGACCA  150

seq1  GGTGATGGGTGAGTT-AGC-AAAAGGGATC-ATGCTAG-ATGTTTAAGTT  187
      ||||||||| ||||| ||| |||||||||| ||||||| |||||||||||
seq2  GGTGATGGGGGAGTTAAGCAAAAAGGGATCAATGCTAGAATGTTTAAGTT  200

seq1  CTTTCCAGATAGAATGGGAGATGGCAGAAGAAGTAGCCATCCATTGTTCA  237
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCAGATAGAATGGGAGATGGCAGAAGAAGTAGCCATCCATTGTTCA  250

seq1  GTGTCTCACAGAGGACTCCATGCGTCCTTTCTCAAAGACATGAGCATAAA  287
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTCACAGAGGACTCCATGCGTCCTTTCTCAAAGACATGAGCATAAA  300

seq1  CAGTCCTGCTATAAATCCCAAGCGATTAAACATCTACACACAAAAATTTC  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCTGCTATAAATCCCAAGCGATTAAACATCTACACACAAAAATTTC  350

seq1  CACTGAACTCA-GGACCTCTGTATTTGAGAGGTACTAG-TTGTGATTTCT  385
      ||||||||||| |||||||||||||||||||||||||| |||||||||||
seq2  CACTGAACTCAGGGACCTCTGTATTTGAGAGGTACTAGTTTGTGATTTCT  400

seq1  GAGCCACCCTGAATGGAGGTCATTGCCTTTGGGGAAGGACAATTAGGTGC  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCACCCTGAATGGAGGTCATTGCCTTTGGGGAAGGACAATTAGGTGC  450

seq1  TTGAAACATGGGATGCTCCTCGGGACCATGCTAGTACAGCTCTCTCCTGG  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAACATGGGATGCTCCTCGGGACCATGCTAGTACAGCTCTCTCCTGG  500

seq1  AGTGACCCCAAAACCAGGACCTTTAAAGAACATAACTCAAAAGAAAATCC  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACCCCAAAACCAGGACCTTTAAAGAACATAACTCAAAAGAAAATCC  550

seq1  CCACCAGGAAATGAGAAATCCCAGCCAGGATCAGGGTGTCTGGAGAGACG  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCAGGAAATGAGAAATCCCAGCCAGGATCAGGGTGTCTGGAGAGACG  600

seq1  CACTTTCTGCGGAGGCTTGGAGGGAGGCATTACGTCTCCAGCTCCTGAAT  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTCTGCGGAGGCTTGGAGGGAGGCATTACGTCTCCAGCTCCTGAAT  650

seq1  AGTTTCATATAGGACTCTGTGAAGAGCTTCAAGAGGCCAGCTTATTTTCC  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCATATAGGACTCTGTGAAGAGCTTCAAGAGGCCAGCTTATTTTCC  700

seq1  CTGGTTTAGGAGCCGTGCATAGTTTGGTGATGGGTGAAAGGTGAGCTTTG  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTTAGGAGCCGTGCATAGTTTGGTGATGGGTGAAAGGTGAGCTTTG  750

seq1  CCTTCAGCTGAAGTGCAGAGGGCTGCAGAAGAGCCAGGAGACTTCCTGGG  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAGCTGAAGTGCAGAGGGCTGCAGAAGAGCCAGGAGACTTCCTGGG  800

seq1  TAAGATTGGATTTAAGACGTGGAAAGGAAGAGAGCAAGCCAAGAAGGGGA  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATTGGATTTAAGACGTGGAAAGGAAGAGAGCAAGCCAAGAAGGGGA  850

seq1  GGGGTTGGGTAGGTTGCTGCATTGAGCCCCTCAGGGCCGGAGGAGGGTGG  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTTGGGTAGGTTGCTGCATTGAGCCCCTCAGGGCCGGAGGAGGGTGG  900

seq1  GCTGAGGGAAAAGAACAGTGTGAGGAAGGAGGAGACAAAGAGGAGTAGGG  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGGGAAAAGAACAGTGTGAGGAAGGAGGAGACAAAGAGGAGTAGGG  950

seq1  GACCTTAGTAAGTGATGAGAGCAAGGAGAGGGTTAGTGACAATAGTTCCT  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTAGTAAGTGATGAGAGCAAGGAGAGGGTTAGTGACAATAGTTCCT  1000

seq1  AAGCACCAAGAAGAGAGAGAAAGTAGATTGCTTGGAAATGCAGGCAGAGA  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACCAAGAAGAGAGAGAAAGTAGATTGCTTGGAAATGCAGGCAGAGA  1050

seq1  TGTGATGATCTCTCTGTGCCCAGCCTGCCCTCTAATTCGCTATATGGCCA  1085
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATGATCTCTCTGTGCCCAGCCTGCCCTCTAATTCGCTATATGGCCA  1100

seq1  AGGATAACCTTGAATTC  1102
      |||||||||||||||||
seq2  AGGATAACCTTGAATTC  1117