BAC Information

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BAC

Clone NameB6Ng01-212P07
Chromosome19 (Build37)
Map Location 51,788,490 - 51,877,546
singlet/doubletdoublet
Overlap geneLOC668536
Upstream geneLOC100042924, LOC100042928
Downstream geneLOC100042936, Ins1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-212P07.bB6Ng01-212P07.g
ACCGA030620GA030621
length9261,063
definitionB6Ng01-212P07.b B6Ng01-212P07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(51,788,490 - 51,789,409)(51,876,635 - 51,877,546)
sequence
gaattcaacatacccaagttctgattttaaatcacactgtaatgattact
ggaacaatttacataataaatgcaagacagattcatgaagtttacatata
cattgatttttttaaatactatattttcagggaattctaagcaatctgtg
acattcagtttgggataaataaatggcctcttgttaatttatacaaatta
ctttaatgtatttttatagacataaattatcatcaatataatttggtcat
gggaatagtatgtaatatatatgtatgtatatatattagtatatatgtat
acatgcatatgtgtatatgtattgcatatagtggtaaaagaatgaaaaat
ggaattattaaaagaatagaaagtcttcatcagaatttagctttacttca
gcccatttcaatttgtgttcttcaatattttacacagattttcttgaaac
tgcaaatttaacatggttcctgggcattttagaagtggccccactatgga
aaggttatattctgattaatgttctttaattcttgaatcttcaaaatgaa
ttggaaagagaagtggagcgcatgaagagaccatggcagtgctgacgaga
ggagcatcttctgttcggcatagctaaaggaacgaaaaggtatttagctt
ctagacgcaatggctcagttcagataatagttactcagagatattgttgt
ttaaaaagattatttcaaatcaccagagaactcaagagaaggggagataa
agaatctaatatctgtatcagtcagtgtactctaaaagtgaatagacaat
gtagtgaatactgacacacagtcgctgaaaatgttgcagaaaagccgctt
tcctgcagtgtgaaaggaatttcccaagtagccctgtcataattgtcaga
gtatgtgtgtgtgtgtgtgtgtgggt

gaattctattgactggatccacgttttgtgttttatccaacatagtcagg
agactgttgtggggttgaagccagtacactgtgcacatattgtcacagta
cgtggacatgatatcagtgatatcactggtgtcatttagggaagccggtg
cctttcagacttttctgtgcatttcttgcctgtcttctttgaaacgaata
aacactgtgggatgatacactgaagttacattttgttttctgaaatattt
ctccctgaatcaacaattatagtgaatgttttcaactgtttattttccta
ataccgttatttctcttgaatgtattcactctcctaatctacagctcttc
atttttttccactttttgaattgcaccataacttgtatcaaaatgaactg
acacaacattatatatgctgagcagcctataattatatatttagggtaac
acacatacatatataaaaacaattaatgaaaaaagaggctatgggtttta
aagggaaaaagaatgggtatatggcaaagttttaagggaagaaagtaaaa
gaggaaaattttaattattttatgttatcaaaaaataacagaaataatta
aaaatgtacttctgagacttggattttgcataatatagtctattacattt
taactgagcattataaaggtgttcagtgttatattcaaagtcacccaagg
tggtggcagagctccttcaagctgacctctgagtacttttaactttttaa
aaatattctgtggacacatttctcctagttgtcacaagatattccagatc
atttccagttatggactggcaaagtcttagaattattctctgtagagcta
tagttatccaacagatgatgggatttagaaatgagcatgtttttgctctt
ttctaaattacccctcctttcttttctttctttcttctttctttcttttt
ttcttctttctttttttcctctttaatggatatttcttcattacctttca
atgtatcctttccggtcttccgaactccctatccatccctccttctgatg
ctatagatgttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_51788490_51789409
seq2: B6Ng01-212P07.b_45_970

seq1  GAATTCAACATACCCAAGTTCTGATTTTAAATCACACTGTAATGATTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACATACCCAAGTTCTGATTTTAAATCACACTGTAATGATTACT  50

seq1  GGAACAATTTACATAATAAATGCAAGACAGATTCATGAAGTTTACATATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAATTTACATAATAAATGCAAGACAGATTCATGAAGTTTACATATA  100

seq1  CATTGATTTTTTTAAATACTATATTTTCAGGGAATTCTAAGCAATCTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGATTTTTTTAAATACTATATTTTCAGGGAATTCTAAGCAATCTGTG  150

seq1  ACATTCAGTTTGGGATAAATAAATGGCCTCTTGTTAATTTATACAAATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCAGTTTGGGATAAATAAATGGCCTCTTGTTAATTTATACAAATTA  200

seq1  CTTTAATGTATTTTTATAGACATAAATTATCATCAATATAATTTGGTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATGTATTTTTATAGACATAAATTATCATCAATATAATTTGGTCAT  250

seq1  GGGAATAGTATGTAATATATATGTATGTATATATATTAGTATATATGTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATAGTATGTAATATATATGTATGTATATATATTAGTATATATGTAT  300

seq1  ACATGCATATGTGTATATGTATTGCATATAGTGGTAAAAGAATGAAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCATATGTGTATATGTATTGCATATAGTGGTAAAAGAATGAAAAAT  350

seq1  GGAATTATTAAAAGAATAGAAAGTCTTCATCAGAATTTAGCTTTACTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTATTAAAAGAATAGAAAGTCTTCATCAGAATTTAGCTTTACTTCA  400

seq1  GCCCATTTCAATTTGTGTTCTTCAATATTTTACACAGATTTTCTTGAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATTTCAATTTGTGTTCTTCAATATTTTACACAGATTTTCTTGAAAC  450

seq1  TGCAAATTTAACATGGTTCCTGGGCATTTTAGAAGTGGCCCCACTATGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAATTTAACATGGTTCCTGGGCATTTTAGAAGTGGCCCCACTATGGA  500

seq1  AAGGTTATATTCTGATTAATGTTCTTTAATTCTTGAATCTTCAAAATGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTATATTCTGATTAATGTTCTTTAATTCTTGAATCTTCAAAATGAA  550

seq1  TTGGAAAGAGAAGTGGAGCGCATGAAGAGACCATGGCAGTGCTGACGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAAGAGAAGTGGAGCGCATGAAGAGACCATGGCAGTGCTGACGAGA  600

seq1  GGAGCATCTTCTGTTCGGCATAGCTAAAGGAACGAAAAGGTATTTAGCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCATCTTCTGTTCGGCATAGCTAAAGGAACGAAAAGGTATTTAGCTT  650

seq1  CTAGACGCAATGGCTCAGTTCAGATAATAGTTACTCAGAGATATTGTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGACGCAATGGCTCAGTTCAGATAATAGTTACTCAGAGATATTGTTGT  700

seq1  T--AAAAGATTATTTCAAATCACCAGAGAACTCAAGAGAAGGGGAGATAA  748
      |  |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAGATTATTTCAAATCACCAGAGAACTCAAGAGAAGGGGAGATAA  750

seq1  AGAATCTAATATCTGTATCAGTCAGTGTACTCTAAAAGTGAATAGACAAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCTAATATCTGTATCAGTCAGTGTACTCTAAAAGTGAATAGACAAT  800

seq1  GTAGTGAATACTGACACACAGTCGCTGAAAATGTTGCAGAAAAGCCGC-T  847
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GTAGTGAATACTGACACACAGTCGCTGAAAATGTTGCAGAAAAGCCGCTT  850

seq1  TCCTGCAGTGTGAAAGGAATTT-CCAAGTAG-CCTGTCATAA-TGTCAGA  894
      |||||||||||||||||||||| |||||||| |||||||||| |||||||
seq2  TCCTGCAGTGTGAAAGGAATTTCCCAAGTAGCCCTGTCATAATTGTCAGA  900

seq1  GTATGTGTGTGTGTGTGTGTGTGTGT  920
      ||||||||||||||||||||||| ||
seq2  GTATGTGTGTGTGTGTGTGTGTGGGT  926


seq1: chr19_51876635_51877546
seq2: B6Ng01-212P07.g_252_1128 (reverse)

seq1  GGAACATCCTTATAGCATCAGGAGAGAGGGGATGGGATAGGGAGTTTCGG  50
      ||||||||  ||||||||||| || || ||||| ||||||||||||    
seq2  GGAACATC--TATAGCATCAGAAG-GA-GGGAT-GGATAGGGAGTT----  41

seq1  GGGAGGACCGGGAAAGGGGATAACATTTGAAAGGTAAATGAAGAAAATAT  100
       ||| |||||| ||   |||| ||| ||||||||| ||||||| ||||||
seq2  CGGAAGACCGGAAA---GGAT-ACA-TTGAAAGGT-AATGAAG-AAATAT  84

seq1  CCAATTAAAAAGAAGAGAAAAAAAAAAGAAAAGAAAAGAAAAAAAAAGAA  150
      || ||||     ||||| |||||||         |||||| ||||||  |
seq2  CC-ATTA-----AAGAGGAAAAAAA--------GAAAGAAGAAAAAAAGA  120

seq1  AAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAGGAGGGGTAATTTAGAAAA  200
      |||||   | ||||||   |||||||||||||||||||||||||||||||
seq2  AAGAA---AGAAGAAA--GAAAGAAAAGAAAGGAGGGGTAATTTAGAAAA  165

seq1  GAGCAAAAACATGCTCATTTCTAAATCCCATCATCTGTTGGATAACTATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAAAACATGCTCATTTCTAAATCCCATCATCTGTTGGATAACTATA  215

seq1  GCTCTACAGAGAATAATTCTAAGACTTTGCCAGTCCATAACTGGAAATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTACAGAGAATAATTCTAAGACTTTGCCAGTCCATAACTGGAAATGA  265

seq1  TCTGGAATATCTTGTGACAACTAGGAGAAATGTGTCCACAGAATATTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAATATCTTGTGACAACTAGGAGAAATGTGTCCACAGAATATTTTT  315

seq1  AAAAAGTTAAAAGTACTCAGAGGTCAGCTTGAAGGAGCTCTGCCACCACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGTTAAAAGTACTCAGAGGTCAGCTTGAAGGAGCTCTGCCACCACC  365

seq1  TTGGGTGACTTTGAATATAACACTGAACACCTTTATAATGCTCAGTTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTGACTTTGAATATAACACTGAACACCTTTATAATGCTCAGTTAAA  415

seq1  ATGTAATAGACTATATTATGCAAAATCCAAGTCTCAGAAGTACATTTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAATAGACTATATTATGCAAAATCCAAGTCTCAGAAGTACATTTTTA  465

seq1  ATTATTTCTGTTATTTTTTGATAACATAAAATAATTAAAATTTTCCTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTCTGTTATTTTTTGATAACATAAAATAATTAAAATTTTCCTCTT  515

seq1  TTACTTTCTTCCCTTAAAACTTTGCCATATACCCATTCTTTTTCCCTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTTCTTCCCTTAAAACTTTGCCATATACCCATTCTTTTTCCCTTTA  565

seq1  AAACCCATAGCCTCTTTTTTCATTAATTGTTTTTATATATGTATGTGTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCATAGCCTCTTTTTTCATTAATTGTTTTTATATATGTATGTGTGT  615

seq1  TACCCTAAATATATAATTATAGGCTGCTCAGCATATATAATGTTGTGTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTAAATATATAATTATAGGCTGCTCAGCATATATAATGTTGTGTCA  665

seq1  GTTCATTTTGATACAAGTTATGGTGCAATTCAAAAAGTGGAAAAAAATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATTTTGATACAAGTTATGGTGCAATTCAAAAAGTGGAAAAAAATGA  715

seq1  AGAGCTGTAGATTAGGAGAGTGAATACATTCAAGAGAAATAACGGTATTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTGTAGATTAGGAGAGTGAATACATTCAAGAGAAATAACGGTATTA  765

seq1  GGAAAATAAACAGTTGAAAACATTCACTATAATTGTTGATTCAGGGAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATAAACAGTTGAAAACATTCACTATAATTGTTGATTCAGGGAGAA  815

seq1  ATATTTCAGAAAACAAAATGTAACTTCAGTGTATCATCCCACAGTGTTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTCAGAAAACAAAATGTAACTTCAGTGTATCATCCCACAGTGTTTA  865

seq1  TTCGTTTCAAAG  912
      ||||||||||||
seq2  TTCGTTTCAAAG  877


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