BAC Information

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BAC

Clone NameB6Ng01-213M15
Chromosome19 (Build37)
Map Location 14,769,252 - 14,982,821
singlet/doubletdoublet
Overlap genenone
Upstream geneOlfr1491, Olfr1492-ps1, Olfr1493-ps1, Olfr1494, Olfr1495, Olfr1496, Olfr1497, Olfr1498-ps1, Olfr1499, Olfr1500, Olfr1501, Olfr1502, Olfr1503-ps1, Olfr1504, Olfr1505, EG667433, Tle4
Downstream geneEG433225, EG635497, Pomc-ps1, LOC667482, Psat1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-213M15.bB6Ng01-213M15.g
ACCGA031215GA031216
length1,2501,128
definitionB6Ng01-213M15.b B6Ng01-213M15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,769,252 - 14,770,496)(14,981,697 - 14,982,821)
sequence
gaattctctgacaagactttgatttttttcttttggtaaatgatgaccat
aattaagctcctcataatgaatacagcaatttttaaacaatacaatttat
aagatgcttctcctcccggaggtttacttttgttaagaaaaagaaataga
gaatctgggactacatttccacatctgggtttatagttatggcttcattt
accttggctttccacttattcatccgttcctttgatacaaaccctttctg
ctcaacacagggttagttggctttaaaaagaaaatttaacatagagcata
ggatacagggacactagtaatagaactttttttcccttaaaggcttcctg
ttgttgccatctttggcttcagttcctttggtagctcaaaactgtatcat
tcacttttacagcacacaaatgaattcatacatataaaccagcaattaat
tgagatagtcaatctatttttcaggagcatttgatatcagggaaaacgga
caaaattagacctatgacacagctatatgctccactaggagggtctcgat
gggttgtcagtggccccagatagaagtagatagaggttacaacaatcctg
tctgtggaagttttttcagtatcgtgacaaagtacatggcagggtgaaag
acttgcattagtttatgccttcaaagtcttcagcctcagaccttgcctcc
tttgattctgatctgtggtacaacacacgtcaagaacacatgacagcgac
tagctacctcatgctacctttgcttctgcttttcattcatccaccctccc
catcaacccacatccttgctgcacccagggacgaggtagaacatccaaag
cgtaccccgtgactcgcttcctgcactgactccgcctctcaaaagtctta
gaactgcataggatagtatcattaggtgggagccaaacattcaacacgtg
agcctatgataggcatatcttattcaaaccacggcatttgcctacacaaa
aatcacttcttttgtagtctattttcagtgttatgcatcatcttgttagt
gccacagacatagaaaagaagaccctcaaagtaagaggcaatactggatt
cctcctgatattcagccactgtccctcttggttctcttaaaacactaggg
cagatgtcaaatttgcacactgagattctaagaaacagtctctcccacct
cactgtctctcattagggaaatctttggtctctctgcaccaaaccttcgg

gaattccaggaagctagcacctttttatggaagggatatattccagggat
catggactcacattactgccacaaaggcactttctagagagaagacacaa
agatagtaaagggagataaacacatgcaacttacagaccagctccaatac
aggagtcatcagaaaaaaaaatgtgaatgaagaggaaagagttcttttta
tactttccacagttgtacaaccctgagaactatctaatacaaaaatctgt
gaaatggatcttgccattttccatatgtagcgaactggaggacgagtgaa
cttagtctctggagaacaacttggtacaatctaatcaaggcatagtgcac
acatatacatttttctcctgagaatgttttacaaaatttgcattctctaa
acagagccataaagaaataaaaagaagggctggagagacggctcagccca
taaaggctaggcttacaaccaaagatataagaaatagaaagatgatcatg
gcaactgatacaaagtgacacaggttcagccctggaagaaagggaacaat
atcaggggattcaaagagggcatatgaaggataccacagcaacacttaca
ctgacacattgactacataaataataacatggatgggccataaacatgca
tggtccagagaaaataactgttactgaatgtatcaagccaggtaatatct
ccataaggatgcagggaggagtggacatgaacgagaagctggtgctcaag
acagcaagtcactttagagaggtcactagaatgcagaaggaattggtatt
gtagaaacagtcggctgggctacagtagactggatcaataactgacagtg
gcacccaagagctgaagacatgtacagcacagggtctggctgaggtcagt
aggatactggttcacactggtgtccaaaacaaccagagggaagaactgca
gcagtgttctaggaaccatgggcagagagcaactcagaagttgaagcaga
attctatgcagtgtgacagctctttcagaagcttttaactattaacactc
agaagaacattccatctttcctgtcctttggggtacatgagtgagagctt
acagcagaatcctagaagtcagcagaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_14769252_14770496
seq2: B6Ng01-213M15.b_43_1292

seq1  GAATTCTCTGACAAGACTTTGATTTTTTTCTTTTGGTAAATGATGACCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGACAAGACTTTGATTTTTTTCTTTTGGTAAATGATGACCAT  50

seq1  AATTAAGCTCCTCATAATGAATACAGCAATTTTTAAACAATACAATTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGCTCCTCATAATGAATACAGCAATTTTTAAACAATACAATTTAT  100

seq1  AAGATGCTTCTCCTCCCGGAGGTTTACTTTTGTTAAGAAAAAGAAATAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGCTTCTCCTCCCGGAGGTTTACTTTTGTTAAGAAAAAGAAATAGA  150

seq1  GAATCTGGGACTACATTTCCACATCTGGGTTTATAGTTATGGCTTCATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTGGGACTACATTTCCACATCTGGGTTTATAGTTATGGCTTCATTT  200

seq1  ACCTTGGCTTTCCACTTATTCATCCGTTCCTTTGATACAAACCCTTTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGGCTTTCCACTTATTCATCCGTTCCTTTGATACAAACCCTTTCTG  250

seq1  CTCAACACAGGGTTAGTTGGCTTTAAAAAGAAAATTTAACATAGAGCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACACAGGGTTAGTTGGCTTTAAAAAGAAAATTTAACATAGAGCATA  300

seq1  GGATACAGGGACACTAGTAATAGAACTTTTTTTCCCTTAAAGGCTTCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACAGGGACACTAGTAATAGAACTTTTTTTCCCTTAAAGGCTTCCTG  350

seq1  TTGTTGCCATCTTTGGCTTCAGTTCCTTTGGTAGCTCAAAACTGTATCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGCCATCTTTGGCTTCAGTTCCTTTGGTAGCTCAAAACTGTATCAT  400

seq1  TCACTTTTACAGCACACAAATGAATTCATACATATAAACCAGCAATTAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTTTACAGCACACAAATGAATTCATACATATAAACCAGCAATTAAT  450

seq1  TGAGATAGTCAATCTATTTTTCAGGAGCATTTGATATCAGGGAAAACGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATAGTCAATCTATTTTTCAGGAGCATTTGATATCAGGGAAAACGGA  500

seq1  CAAAATTAGACCTATGACACAGCTATATGCTCCACTAGGAGGGTCTCGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTAGACCTATGACACAGCTATATGCTCCACTAGGAGGGTCTCGAT  550

seq1  GGGTTGTCAGTGGCCCCAGATAGAAGTAGATAGAGGTTACAACAATCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGTCAGTGGCCCCAGATAGAAGTAGATAGAGGTTACAACAATCCTG  600

seq1  TCTGTGGAAGTTTTTTCAGTATCGTGACAAAGTACATGGCAGGGTGAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGGAAGTTTTTTCAGTATCGTGACAAAGTACATGGCAGGGTGAAAG  650

seq1  ACTTGCATTAGTTTATGCCTTCAAAGTCTTCAGCCTCAGACCTTGCCTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCATTAGTTTATGCCTTCAAAGTCTTCAGCCTCAGACCTTGCCTCC  700

seq1  TTTGATTCTGATCTGTGGTACAACACACGTCAAGAACACATGACAGCGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTCTGATCTGTGGTACAACACACGTCAAGAACACATGACAGCGAC  750

seq1  TAGCTACCTCATGCTACCTTTGCTTCTGCTTTTCATTCATCCACCCTCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTACCTCATGCTACCTTTGCTTCTGCTTTTCATTCATCCACCCTCCC  800

seq1  CATCAACCCACATCCTTGCTGCACCCAGGGACGAGGTAGAACATCCAAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAACCCACATCCTTGCTGCACCCAGGGACGAGGTAGAACATCCAAAG  850

seq1  CGTACCCCGTGACTCGCTTCCTGCACTGACTCCGCCTCTCAAAAGTCTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTACCCCGTGACTCGCTTCCTGCACTGACTCCGCCTCTCAAAAGTCTTA  900

seq1  GAACTGCATAGGATAGTATCATTAGGTGGGAGCCAAACATTCAACACGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGCATAGGATAGTATCATTAGGTGGGAGCCAAACATTCAACACGTG  950

seq1  AGCCTATGATAGGCATATCTTATTCAAACCACGGCATTTGCCTACACAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTATGATAGGCATATCTTATTCAAACCACGGCATTTGCCTACACAAA  1000

seq1  AATCACTTC-TCTGTAGTCTATTTTCAGGTTGTTATGCATCATCT--GTA  1047
      ||||||||| | ||||||||||||||||  |||||||||||||||   ||
seq2  AATCACTTCTTTTGTAGTCTATTTTCAG--TGTTATGCATCATCTTGTTA  1048

seq1  GTG-CACAGACAAATAGAAAAAGACAGACCTCAAAGTAAAGAGGCCAATA  1096
      ||| |||||||| | | || |||||   ||||||||| |||||| |||||
seq2  GTGCCACAGACATAGAAAAGAAGAC---CCTCAAAGT-AAGAGG-CAATA  1093

seq1  CTGGATT-CTCCTGATA-TCAGCCCACTGTCCTCTTTGGTTCTCTTAAGA  1144
      ||||||| ||||||||| |||| |||||||||   ||||||||||||| |
seq2  CTGGATTCCTCCTGATATTCAG-CCACTGTCCCTCTTGGTTCTCTTAAAA  1142

seq1  CAACAGGCCAGATGTCAAA-TTGCACACTGAG--TCTCAGGACAAAAGTC  1191
      ||  ||| ||||||||||| ||||||||||||  ||| ||   || ||||
seq2  CACTAGGGCAGATGTCAAATTTGCACACTGAGATTCTAAG--AAACAGTC  1190

seq1  TTCTACAACTCACTG--TTTCATTA-GGAAATCTTTGGT-TCTCTGCAC-  1236
      |    || |||||||  | |||||| ||||||||||||| ||||||||| 
seq2  TCTCCCACCTCACTGTCTCTCATTAGGGAAATCTTTGGTCTCTCTGCACC  1240

seq1  -AAACTTCGG  1245
       || ||||||
seq2  AAACCTTCGG  1250

seq1: chr19_14981697_14982821
seq2: B6Ng01-213M15.g_65_1192 (reverse)

seq1  GTTCTGCTGAC-TCTAGGA-TCTGCTGT-AGCTCTTCACTCATGGTACCC  47
      ||||||||||| ||||||| |||||||| ||||| |||||||||   |||
seq2  GTTCTGCTGACTTCTAGGATTCTGCTGTAAGCTC-TCACTCATGTACCCC  49

seq1  AAAGGACAGG-AAGATGGGATG-TCTTCTGAGTGTTAATAG-TATAGCCT  94
      |||||||||| ||||||| ||| |||||||||||||||||| || |  ||
seq2  AAAGGACAGGAAAGATGGAATGTTCTTCTGAGTGTTAATAGTTAAAAGCT  99

seq1  TCTGAAGGAGCTGGCCACACTGCATAGAATTCTGCTTCAACCTCTGAGTT  144
      |||||| ||||| | |||||||||||||||||||||||||| ||||||||
seq2  TCTGAAAGAGCT-GTCACACTGCATAGAATTCTGCTTCAACTTCTGAGTT  148

seq1  GCTCTCTGCCCATGGTTCCTAGAACACTGCTGCAGTTCTTCCCTCTGGTT  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTGCCCATGGTTCCTAGAACACTGCTGCAGTTCTTCCCTCTGGTT  198

seq1  GTTTTTGGACACCAGTGTGAACCAGTATCCTACTGACCTCAGCCAGACCC  244
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  G-TTTTGGACACCAGTGTGAACCAGTATCCTACTGACCTCAGCCAGACCC  247

seq1  TGTGCTGTACATGTCTTCAGCTCTTGGGTGCCACTGTCAGTTATTGATCC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTGTACATGTCTTCAGCTCTTGGGTGCCACTGTCAGTTATTGATCC  297

seq1  AGTCTACTGTAGCCCAGCCGACTGTTTCTACAATACCAATTCCTTCTGCA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTACTGTAGCCCAGCCGACTGTTTCTACAATACCAATTCCTTCTGCA  347

seq1  TTCTAGTGACCTCTCTAAAGTGACTTGCTGTCTTGAGCACCAGCTTCTCG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGTGACCTCTCTAAAGTGACTTGCTGTCTTGAGCACCAGCTTCTCG  397

seq1  TTCATGTCCACTCCTCCCTGCATCCTTATGGAGATATTACCTGGCTTGAT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGTCCACTCCTCCCTGCATCCTTATGGAGATATTACCTGGCTTGAT  447

seq1  ACATTCAGTAACAGTTATTTTCTCTGGACCATGCATGTTTATGGCCCATC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCAGTAACAGTTATTTTCTCTGGACCATGCATGTTTATGGCCCATC  497

seq1  CATGTTATTATTTATGTAGTCAATGTGTCAGTGTAAGTGTTGCTGTGGTA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTATTATTTATGTAGTCAATGTGTCAGTGTAAGTGTTGCTGTGGTA  547

seq1  TCCTTCATATGCCCTCTTTGAATCCCCTGATATTGTTCCCTTTCTTCCAG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCATATGCCCTCTTTGAATCCCCTGATATTGTTCCCTTTCTTCCAG  597

seq1  GGCTGAACCTGTGTCACTTTGTATCAGTTGCCATGATCATCTTTCTATTT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAACCTGTGTCACTTTGTATCAGTTGCCATGATCATCTTTCTATTT  647

seq1  CTTATATCTTTGGTTGTAAGCCTAGCCTTTATGGGCTGAGCCGTCTCTCC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATATCTTTGGTTGTAAGCCTAGCCTTTATGGGCTGAGCCGTCTCTCC  697

seq1  AGCCCTTCTTTTTATTTCTTTATGGCTCTGTTTAGAGAATGCAAATTTTG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTTCTTTTTATTTCTTTATGGCTCTGTTTAGAGAATGCAAATTTTG  747

seq1  TAAAACATTCTCAGGAGAAAAATGTATATGTGTGCACTATGCCTTGATTA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACATTCTCAGGAGAAAAATGTATATGTGTGCACTATGCCTTGATTA  797

seq1  GATTGTACCAAGTTGTTCTCCAGAGACTAAGTTCACTCGTCCTCCAGTTC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTACCAAGTTGTTCTCCAGAGACTAAGTTCACTCGTCCTCCAGTTC  847

seq1  GCTACATATGGAAAATGGCAAGATCCATTTCACAGATTTTTGTATTAGAT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACATATGGAAAATGGCAAGATCCATTTCACAGATTTTTGTATTAGAT  897

seq1  AGTTCTCAGGGTTGTACAACTGTGGAAAGTATAAAAAGAACTCTTTCCTC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTCAGGGTTGTACAACTGTGGAAAGTATAAAAAGAACTCTTTCCTC  947

seq1  TTCATTCACATTTTTTTTTCTGATGACTCCTGTATTGGAGCTGGTCTGTA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTCACATTTTTTTTTCTGATGACTCCTGTATTGGAGCTGGTCTGTA  997

seq1  AGTTGCATGTGTTTATCTCCCTTTACTATCTTTGTGTCTTCTCTCTAGAA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCATGTGTTTATCTCCCTTTACTATCTTTGTGTCTTCTCTCTAGAA  1047

seq1  AGTGCCTTTGTGGCAGTAATGTGAGTCCATGATCCCTGGAATATATCCCT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCTTTGTGGCAGTAATGTGAGTCCATGATCCCTGGAATATATCCCT  1097

seq1  TCCATAAAAAGGTGCTAGCTTCCTGGAATTC  1125
      |||||||||||||||||||||||||||||||
seq2  TCCATAAAAAGGTGCTAGCTTCCTGGAATTC  1128