BAC Information

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BAC

Clone NameB6Ng01-214E07
Chromosome19 (Build37)
Map Location 3,662,680 - 3,806,034
singlet/doubletdoublet
Overlap geneLrp5, 1810055G02Rik, LOC100039289, Suv420h1
Upstream geneLOC630980, LOC665804, EG665806, EG665810, LOC100039218, Ighmbp2, Mrpl21, LOC665826, Cpt1a, Mtl5, Gal, Saps3, LOC100043581
Downstream geneChka, Tcirg1, Ndufs8, Aldh3b1, Unc93b1, LOC100039337, 1700055N04Rik, Aldh3b2, Acy3, Tbx10, Nudt8, Doc2g, Ndufv1, Gstp1, Gstp2, BC021614, Cabp2, Cdk2ap2, Pitpnm1, Aip, Tmem134, Cabp4, Gpr152, Coro1b, Ptprcap, Rps6kb2, AI790298, Tbc1d10c, Ppp1ca, Rad9, Clcf1, Pold4, Ssh3, Ankrd13d, Adrbk1, Fbxl11, LOC100043628, Rhod, Syt12, 2010003K11Rik, Pcx, Lrfn4, Rce1, Gm960, Spnb3, Rbm4b, Rbm4, Rbm14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214E07.bB6Ng01-214E07.g
ACCGA031562GA031563
length1,162805
definitionB6Ng01-214E07.b B6Ng01-214E07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(3,804,858 - 3,806,034)(3,662,680 - 3,663,484)
sequence
gaattctctgttcactattgttcattcctaaccaatgcatcaagtttgat
cataaccattataatacaataatctttaatatctgttaaggtaactctcc
tttaaaaaaaaaaagaggcaaggtctcttatttctcgggctggtctcaaa
tgctctacttaccaagaatgaccagaacttctaatcctcctgcctcactc
tctgagtgctggaatcatagacaagtaacactatagcagccgctcaatcg
ccaggatctaccctgttctttaagtagctctgcagccgcttcctccccaa
ccctcctttaacctttgttgtggtcgctgttgttcagtgctgaggacccg
gcttcttctatgactgttttgagagagagcgtactgtgtggcctgggttt
accttaaacttttccaagtgcatgtgattcagcctcccaaacactgggat
tatcagcataaaccaccctgcctggctgccccaatgttcttttgattttg
tctttcttggttttcatcaagcatacaatactttataagctttaatatag
ttttggtcaattctaaaaataaagtttcaagcagtttattattatggaaa
gagtggcatctatgtgttcacagccaacatcacagttctttttactcaga
tcttatcttgagggactgtctcatattttacctttcaaaattctgctagt
aaaactagtacaatttatgtagaaacttattaccctcactgtgtttttca
tttgcacaccctcatagactacatttattgttgttttctcctaagcactt
ctgtactgtgacccatcagtagcagctgtatgacatctgattctgttttt
cacacaacacttggggctgagctacagagcacatgctagctctacacata
tgatgtgggtggttgggcagggtcaataccacaccatcatgacagttaca
tgctgaataggcagagagttctgattctttacctttcacagtatacatcg
cagaactcattattttctcaaaaagccatctcatagtaacaagaaatttc
ttctcaggttcaatatctctcagagcttaacgcatgctgttctcgaccag
tgaacaaactgaatagagtaatgtgttaagactctccaccccagccaaca
agaatctttgag
gaattcataacagatggtttgccttccactccaatagcccatgttttaca
ctgtttgcgtggttaccccaaacaaggcccaattccaggtaattcaaccc
tttgctgagaccccaaaataaagagcaattttggtccatgccttatttat
aatcacaaagcattacattggacctctgagtacttggagagtgtgtagga
gcctgtgcacacacggtgcatgggggtggggaggagattctatcaccatc
ccaatggggaaggccaagccacagaaagaataagggttcacatacaagaa
gctaccaacttagttggagagcatacacacacaggcatagttcacacggc
cacacagcacctaagcaaggagctccaaggtggtggcaccaggcgtgggt
gtactgcgcaagctttctggaaggaggctggggtctcaaagaaggaagac
aacacagaaaacggtgatcacaccccaaagagacatcaagctgcagctat
gcatctcacatccatgatttctactatgggacacacctcagcctcctcag
cacctgaacactggatggctaccagcttgggatactcacaggatcactta
tacacatccttgtaccccatccacaggacccagggctccccattctagct
ccactcaccttcttccatcttatatctgatactgcccagtcagagcttcc
cactgccctcactgcccagagaactcaactgagactatttttaatgcata
tggacacactgtgcgcgcacgcgtgtgtattgtgtgtgtgtattgtgtgt
gtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_3804858_3806034
seq2: B6Ng01-214E07.b_46_1207 (reverse)

seq1  CTCAAAGATTCTTTGTTTGCCTTGGGTGTGAGAGTCTTAACACATTACTT  50
      |||||||||||||   ||| || ||||| ||||||||||||||||||| |
seq2  CTCAAAGATTCTT--GTTGGCTGGGGTG-GAGAGTCTTAACACATTAC-T  46

seq1  CTATTTCAGTTTGTGTCAACTGGTCGAGATACAGCATGCGTTAAGGCTCT  100
      ||| |||||||||| || ||||||||||| |||||||||||||| |||||
seq2  CTA-TTCAGTTTGT-TC-ACTGGTCGAGA-ACAGCATGCGTTAA-GCTCT  91

seq1  GAGAGATATTGAACCTGGAGAAGAAATTTCTTGTTACTATGGAGATGGCT  150
      |||||||||||||||| ||||||||||||||||||||||| |||||||||
seq2  GAGAGATATTGAACCT-GAGAAGAAATTTCTTGTTACTAT-GAGATGGCT  139

seq1  TTTTTGGAGAAAATAATGAGTTCTGCGAATGTTATACTTGTGAAAGGTAA  200
      ||||  ||||||||||||||||||||| ||| ||||| ||||||||||||
seq2  TTTT--GAGAAAATAATGAGTTCTGCG-ATG-TATAC-TGTGAAAGGTAA  184

seq1  AGAATCAG-ACTCTCTGCCTATTCAGCATGTAACTGTCATGATGGTGTGG  249
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCAGAACTCTCTGCCTATTCAGCATGTAACTGTCATGATGGTGTGG  234

seq1  TATTGACCCTGCCCAACCACCCACATCATATGTGTAGAGCTAGCATGTGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGACCCTGCCCAACCACCCACATCATATGTGTAGAGCTAGCATGTGC  284

seq1  TCTGTAGCTCAGCCCCAAGTGTTGTGTGAAAAACAGAATCAGATGTCATA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAGCTCAGCCCCAAGTGTTGTGTGAAAAACAGAATCAGATGTCATA  334

seq1  CAGCTGCTACTGATGGGTCACAGTACAGAAGTGCTTAGGAGAAAACAACA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGCTACTGATGGGTCACAGTACAGAAGTGCTTAGGAGAAAACAACA  384

seq1  ATAAATGTAGTCTATGAGGGTGTGCAAATGAAAAACACAGTGAGGGTAAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGTAGTCTATGAGGGTGTGCAAATGAAAAACACAGTGAGGGTAAT  434

seq1  AAGTTTCTACATAAATTGTACTAGTTTTACTAGCAGAATTTTGAAAGGTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTCTACATAAATTGTACTAGTTTTACTAGCAGAATTTTGAAAGGTA  484

seq1  AAATATGAGACAGTCCCTCAAGATAAGATCTGAGTAAAAAGAACTGTGAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGAGACAGTCCCTCAAGATAAGATCTGAGTAAAAAGAACTGTGAT  534

seq1  GTTGGCTGTGAACACATAGATGCCACTCTTTCCATAATAATAAACTGCTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCTGTGAACACATAGATGCCACTCTTTCCATAATAATAAACTGCTT  584

seq1  GAAACTTTATTTTTAGAATTGACCAAAACTATATTAAAGCTTATAAAGTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTTTATTTTTAGAATTGACCAAAACTATATTAAAGCTTATAAAGTA  634

seq1  TTGTATGCTTGATGAAAACCAAGAAAGACAAAATCAAAAGAACATTGGGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATGCTTGATGAAAACCAAGAAAGACAAAATCAAAAGAACATTGGGG  684

seq1  CAGCCAGGCAGGGTGGTTTATGCTGATAATCCCAGTGTTTGGGAGGCTGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAGGCAGGGTGGTTTATGCTGATAATCCCAGTGTTTGGGAGGCTGA  734

seq1  ATCACATGCACTTGGAAAAGTTTAAGGTAAACCCAGGCCACACAGTACGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACATGCACTTGGAAAAGTTTAAGGTAAACCCAGGCCACACAGTACGC  784

seq1  TCTCTCTCAAAACAGTCATAGAAGAAGCCGGGTCCTCAGCACTGAACAAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCAAAACAGTCATAGAAGAAGCCGGGTCCTCAGCACTGAACAAC  834

seq1  AGCGACCACAACAAAGGTTAAAGGAGGGTTGGGGAGGAAGCGGCTGCAGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGACCACAACAAAGGTTAAAGGAGGGTTGGGGAGGAAGCGGCTGCAGA  884

seq1  GCTACTTAAAGAACAGGGTAGATCCTGGCGATTGAGCGGCTGCTATAGTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTTAAAGAACAGGGTAGATCCTGGCGATTGAGCGGCTGCTATAGTG  934

seq1  TTACTTGTCTATGATTCCAGCACTCAGAGAGTGAGGCAGGAGGATTAGAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTGTCTATGATTCCAGCACTCAGAGAGTGAGGCAGGAGGATTAGAA  984

seq1  GTTCTGGTCATTCTTGGTAAGTAGAGCATTTGAGACCAGCCCGAGAAATA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGGTCATTCTTGGTAAGTAGAGCATTTGAGACCAGCCCGAGAAATA  1034

seq1  AGAGACCTTGCCTCTTTTTTTTTTTAAAGGAGAGTTACCTTAACAGATAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACCTTGCCTCTTTTTTTTTTTAAAGGAGAGTTACCTTAACAGATAT  1084

seq1  TAAAGATTATTGTATTATAATGGTTATGATCAAACTTGATGCATTGGTTA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGATTATTGTATTATAATGGTTATGATCAAACTTGATGCATTGGTTA  1134

seq1  GGAATGAACAATAGTGAACAGAGAATTC  1177
      ||||||||||||||||||||||||||||
seq2  GGAATGAACAATAGTGAACAGAGAATTC  1162

seq1: chr19_3662680_3663484
seq2: B6Ng01-214E07.g_65_869

seq1  GAATTCATAACAGATGGTTTGCCTTCCACTCCAATAGCCCATGTTTTACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAACAGATGGTTTGCCTTCCACTCCAATAGCCCATGTTTTACA  50

seq1  CTGTTTGCGTGGTTACCCCAAACAAGGCCCAATTCCAGGTAATTCAACCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTGCGTGGTTACCCCAAACAAGGCCCAATTCCAGGTAATTCAACCC  100

seq1  TTTGCTGAGACCCCAAAATAAAGAGCAATTTTGGTCCATGCCTTATTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTGAGACCCCAAAATAAAGAGCAATTTTGGTCCATGCCTTATTTAT  150

seq1  AATCACAAAGCATTACATTGGACCTCTGAGTACTTGGAGAGTGTGTAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACAAAGCATTACATTGGACCTCTGAGTACTTGGAGAGTGTGTAGGA  200

seq1  GCCTGTGCACACACGGTGCATGGGGGTGGGGAGGAGATTCTATCACCATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTGCACACACGGTGCATGGGGGTGGGGAGGAGATTCTATCACCATC  250

seq1  CCAATGGGGAAGGCCAAGCCACAGAAAGAATAAGGGTTCACATACAAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGGGGAAGGCCAAGCCACAGAAAGAATAAGGGTTCACATACAAGAA  300

seq1  GCTACCAACTTAGTTGGAGAGCATACACACACAGGCATAGTTCACACGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACCAACTTAGTTGGAGAGCATACACACACAGGCATAGTTCACACGGC  350

seq1  CACACAGCACCTAAGCAAGGAGCTCCAAGGTGGTGGCACCAGGCGTGGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGCACCTAAGCAAGGAGCTCCAAGGTGGTGGCACCAGGCGTGGGT  400

seq1  GTACTGCGCAAGCTTTCTGGAAGGAGGCTGGGGTCTCAAAGAAGGAAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGCGCAAGCTTTCTGGAAGGAGGCTGGGGTCTCAAAGAAGGAAGAC  450

seq1  AACACAGAAAACGGTGATCACACCCCAAAGAGACATCAAGCTGCAGCTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGAAAACGGTGATCACACCCCAAAGAGACATCAAGCTGCAGCTAT  500

seq1  GCATCTCACATCCATGATTTCTACTATGGGACACACCTCAGCCTCCTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTCACATCCATGATTTCTACTATGGGACACACCTCAGCCTCCTCAG  550

seq1  CACCTGAACACTGGATGGCTACCAGCTTGGGATACTCACAGGATCACTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGAACACTGGATGGCTACCAGCTTGGGATACTCACAGGATCACTTA  600

seq1  TACACATCCTTGTACCCCATCCACAGGACCCAGGGCTCCCCATTCTAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATCCTTGTACCCCATCCACAGGACCCAGGGCTCCCCATTCTAGCT  650

seq1  CCACTCACCTTCTTCCATCTTATATCTGATACTGCCCAGTCAGAGCTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCACCTTCTTCCATCTTATATCTGATACTGCCCAGTCAGAGCTTCC  700

seq1  CACTGCCCTCACTGCCCAGAGAACTCAACTGAGACTATTTTTAATGCATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCCCTCACTGCCCAGAGAACTCAACTGAGACTATTTTTAATGCATA  750

seq1  TGGACACACTGTGCGCGCACGCGTGTGTATTGTGTGTGTGTATTGTGTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACACACTGTGCGCGCACGCGTGTGTATTGTGTGTGTGTATTGTGTGT  800

seq1  GTGTG  805
      |||||
seq2  GTGTG  805