BAC Information

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BAC

Clone NameB6Ng01-214G11
Chromosome19 (Build37)
Map Location 15,734,855 - 15,941,091
singlet/doubletdoublet
Overlap geneLOC667482
Upstream geneEG433225, EG635497, Pomc-ps1
Downstream genePsat1, LOC100041424, Cep78, LOC100042048, Gnaq, E030024N20Rik, LOC624438, Gna14, LOC666665, Vps13a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214G11.bB6Ng01-214G11.g
ACCGA031661GA031662
length1,019833
definitionB6Ng01-214G11.b B6Ng01-214G11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,734,855 - 15,735,868)(15,940,259 - 15,941,091)
sequence
gaattcagaatgaagccccgctgcctgtgtggatgaagaacacctctcct
gctgccttccaggtatgactcagggtgagaaacgcatgcatctgtcccag
tgactgatggtggggggaaaactccatttttcacaaattatgggcctttt
ttttttaatgctggtaatgcacagaagattaaagtgaagtctatatttca
caagtgggggaccaaatgatttaaaacctgtgttataatgacctacttta
gagttgaagaatcaatttcttttccagcaagaatctgttaatttaaggaa
aagcagaggggagagaagaagcgtgtgaactgagcataacagaaagcagg
gaagggggtgggggagcgaagctcaccaaggagcctgagcaggctttgtc
ccgtggcatctttatgtgtttagcaacttacagaagttgggagagaagat
gaacttcagattcggttttggttccatctctgccccacagaggcttcgtt
agttgcctattgctaaaaacaaattagcacaagtgattaccttatggcaa
tacacacatattatcttataggtcacaaaccagacatgggtcactccgaa
ctaaaaccaagatgctggctgctatgttctttggaggctctaaggaagaa
gaaacggtttccttgccggttccagctgtttgaagccacccgcatttctt
aatccatggacttctgctccatgaagctgtcgatgaccagttgagtcctt
ctcataacacattactttgtcagttgctatccacctgaatcctgcacctg
cttttaaggggctcgccttagtgggctcagccataacccaggatgatctt
cttttagaacagttgattggcaaacttattccacctgtactccttccttt
ggggccacacctagcataccttctatgcttgaagatatgagagcacatga
catccctcagacggtgggtgctcacctgccttgtatggctgtcgagaaag
cttggcttcctcatctatc

gaattcccgccacaccgaagacacttctgccattcttactcatgagccag
aatgagtcctctatgtaacagatcggcttctcaggccacttattaccctt
tcccccaggaagccccaccctgtaatgagccttgtttcctactggcgctc
tcctcaccatcagcaaacactgcttatttctgcctctaaatcttggtctg
tttttctgtctctctgaaattcaacctctgcccctatttcaatgcccttc
ttcaagctcctagagtctttgtagccaactggggcccctgaggtgacctt
tctttctgtggacttttgacattctgcctcctgaggtcacacagctgcct
caacccttgttctgggtttgttgtggtcttctcagctaaaaacctagatt
ttctgacattggtcatgctcagaactctttagagcaagttgctagacaaa
ctgcaacacaacagaacttgactggctgcataaaatgaaaaaaaataaag
gggggggtgttcttaattaggtatgcgtggtcaggggtggtggtaaaaaa
tttcatatactggatattctacaagtgatttcaaatattctttttatcta
tcaattaaatcatccctatatacttggtttccacattcatccacaaatta
tgaagtaaaatgacctgaaaaaaaaaactgtttgaaacatataggttttt
cttgtttttattcttaaataaggcagggcaggggctatttgcatagcatt
tgtgtggggttgggtattgtaaatcactagaaggctaccataggttggaa
tgtgtatgtgtgcatttatgtattggggtggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_15734855_15735868
seq2: B6Ng01-214G11.b_40_1058

seq1  GAATTCAGAATGAAGCCCCGCTGCCTGTGTGGATGAAGAACACCTCTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAATGAAGCCCCGCTGCCTGTGTGGATGAAGAACACCTCTCCT  50

seq1  GCTGCCTTCCAGGTATGACTCAGGGTGAGAAACGCATGCATCTGTCCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCTTCCAGGTATGACTCAGGGTGAGAAACGCATGCATCTGTCCCAG  100

seq1  TGACTGATGGTGGGGGGAAAACTCCATTTTTCACAAATTATGGGCCTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGATGGTGGGGGGAAAACTCCATTTTTCACAAATTATGGGCCTTTT  150

seq1  TTTTTTAATGCTGGTAATGCACAGAAGATTAAAGTGAAGTCTATATTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAATGCTGGTAATGCACAGAAGATTAAAGTGAAGTCTATATTTCA  200

seq1  CAAGTGGGGGACCAAATGATTTAAAACCTGTGTTATAATGACCTACTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGGGGGACCAAATGATTTAAAACCTGTGTTATAATGACCTACTTTA  250

seq1  GAGTTGAAGAATCAATTTCTTTTCCAGCAAGAATCTGTTAATTTAAGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGAAGAATCAATTTCTTTTCCAGCAAGAATCTGTTAATTTAAGGAA  300

seq1  AAGCAGAGGGGAGAGAAGAAGCGTGTGAACTGAGCATAACAGAAAGCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGAGGGGAGAGAAGAAGCGTGTGAACTGAGCATAACAGAAAGCAGG  350

seq1  GAAGGGGGTGGGGGAGCGAAGCTCACCAAGGAGCCTGAGCAGGCTTTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGGGTGGGGGAGCGAAGCTCACCAAGGAGCCTGAGCAGGCTTTGTC  400

seq1  CCGTGGCATCTTTATGTGTTTAGCAACTTACAGAAGTTGGGAGAGAAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGGCATCTTTATGTGTTTAGCAACTTACAGAAGTTGGGAGAGAAGAT  450

seq1  GAACTTCAGATTCGGTTTTGGTTCCATCTCTGCCCCACAGAGGCTTCGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTCAGATTCGGTTTTGGTTCCATCTCTGCCCCACAGAGGCTTCGTT  500

seq1  AGTTGCCTATTGCTAAAAACAAATTAGCACAAGTGATTACCTTATGGCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCCTATTGCTAAAAACAAATTAGCACAAGTGATTACCTTATGGCAA  550

seq1  TACACACATATTATCTTATAGGTCACAAACCAGACATGGGTCACTCCGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACACATATTATCTTATAGGTCACAAACCAGACATGGGTCACTCCGAA  600

seq1  CTAAAACCAAGATGCTGGCTGCTATGTTCTTTGGAGGCTCTAAGGAAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAACCAAGATGCTGGCTGCTATGTTCTTTGGAGGCTCTAAGGAAGAA  650

seq1  GAAACGGTTTCCTTGCCGGTTCCAGCTGTTTGAAGCCACCCGCATTTCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACGGTTTCCTTGCCGGTTCCAGCTGTTTGAAGCCACCCGCATTTCTT  700

seq1  AATCCATGGACTTCTGCTCCATGAAGCTGTCGATGACCAGTTGAGTCCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCATGGACTTCTGCTCCATGAAGCTGTCGATGACCAGTTGAGTCCTT  750

seq1  CTCATAACACATTACTTTGTCAGTTGCTATCCACCTGAATCCTGCAACCT  800
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CTCATAACACATTACTTTGTCAGTTGCTATCCACCTGAATCCTGC-ACCT  799

seq1  GCTTTTAA-GGGCTCGCCTTAGTGGGCTCAGCCATAACCCAGGATGATCT  849
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTAAGGGGCTCGCCTTAGTGGGCTCAGCCATAACCCAGGATGATCT  849

seq1  TCTTTTAGAACAGTTGATTGGCAAACTTAATTCCACCTGTACT-CTTCCT  898
      |||||||||||||||||||||||||||| |||||||||||||| ||||||
seq2  TCTTTTAGAACAGTTGATTGGCAAACTT-ATTCCACCTGTACTCCTTCCT  898

seq1  TT-GGGCCACACCTAGCATACC-TCCATGC-TGAAGATATGAGAGCACA-  944
      || ||||||||||||||||||| || |||| |||||||||||||||||| 
seq2  TTGGGGCCACACCTAGCATACCTTCTATGCTTGAAGATATGAGAGCACAT  948

seq1  GACAT-CCTCAGGACGTGGGTGCTCACCTGCCTTGTATGGCTGTCGTGGA  993
      ||||| ||||||   ||||||||||||||||||||||||||||||| | |
seq2  GACATCCCTCAGACGGTGGGTGCTCACCTGCCTTGTATGGCTGTCGAGAA  998

seq1  AGCTTGGCTTCCTCATCTATC  1014
      |||||||||||||||||||||
seq2  AGCTTGGCTTCCTCATCTATC  1019


seq1: chr19_15940259_15941091
seq2: B6Ng01-214G11.g_62_894 (reverse)

seq1  CACCACCCCAATACATAAATGCACACATACACATTCCAACCTATGGTAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACCCCAATACATAAATGCACACATACACATTCCAACCTATGGTAGC  50

seq1  CTTCTAGTGATTTACAATACCCAACCCCACACAAATGCTATGCAAATAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAGTGATTTACAATACCCAACCCCACACAAATGCTATGCAAATAGC  100

seq1  CCCTGCCCTGCCTTATTTAAGAATAAAAACAAGAAAAACCTATATGTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCCCTGCCTTATTTAAGAATAAAAACAAGAAAAACCTATATGTTTC  150

seq1  AAACAGTTTTTTTTTTCAGGTCATTTTACTTCATAATTTGTGGATGAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGTTTTTTTTTTCAGGTCATTTTACTTCATAATTTGTGGATGAATG  200

seq1  TGGAAACCAAGTATATAGGGATGATTTAATTGATAGATAAAAAGAATATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAACCAAGTATATAGGGATGATTTAATTGATAGATAAAAAGAATATT  250

seq1  TGAAATCACTTGTAGAATATCCAGTATATGAAATTTTTTACCACCACCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATCACTTGTAGAATATCCAGTATATGAAATTTTTTACCACCACCCC  300

seq1  TGACCACGCATACCTAATTAAGAACACCCCCCCCTTTATTTTTTTTCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCACGCATACCTAATTAAGAACACCCCCCCCTTTATTTTTTTTCATT  350

seq1  TTATGCAGCCAGTCAAGTTCTGTTGTGTTGCAGTTTGTCTAGCAACTTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCAGCCAGTCAAGTTCTGTTGTGTTGCAGTTTGTCTAGCAACTTGC  400

seq1  TCTAAAGAGTTCTGAGCATGACCAATGTCAGAAAATCTAGGTTTTTAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAGAGTTCTGAGCATGACCAATGTCAGAAAATCTAGGTTTTTAGCT  450

seq1  GAGAAGACCACAACAAACCCAGAACAAGGGTTGAGGCAGCTGTGTGACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGACCACAACAAACCCAGAACAAGGGTTGAGGCAGCTGTGTGACCT  500

seq1  CAGGAGGCAGAATGTCAAAAGTCCACAGAAAGAAAGGTCACCTCAGGGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGGCAGAATGTCAAAAGTCCACAGAAAGAAAGGTCACCTCAGGGGC  550

seq1  CCCAGTTGGCTACAAAGACTCTAGGAGCTTGAAGAAGGGCATTGAAATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTTGGCTACAAAGACTCTAGGAGCTTGAAGAAGGGCATTGAAATAG  600

seq1  GGGCAGAGGTTGAATTTCAGAGAGACAGAAAAACAGACCAAGATTTAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGAGGTTGAATTTCAGAGAGACAGAAAAACAGACCAAGATTTAGAG  650

seq1  GCAGAAATAAGCAGTGTTTGCTGATGGTGAGGAGAGCGCCAGTAGGAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAATAAGCAGTGTTTGCTGATGGTGAGGAGAGCGCCAGTAGGAAAC  700

seq1  AAGGCTCATTACAGGGTGGGGCTTCCTGGGGGAAAGGGTAATAAGTGGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTCATTACAGGGTGGGGCTTCCTGGGGGAAAGGGTAATAAGTGGCC  750

seq1  TGAGAAGCCGATCTGTTACATAGAGGACTCATTCTGGCTCATGAGTAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGCCGATCTGTTACATAGAGGACTCATTCTGGCTCATGAGTAAGA  800

seq1  ATGGCAGAAGTGTCTTCGGTGTGGCGGGAATTC  833
      |||||||||||||||||||||||||||||||||
seq2  ATGGCAGAAGTGTCTTCGGTGTGGCGGGAATTC  833


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