MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-220O19
Chromosome	10 (Build37)	19 (Build37)
Map Location	120,432,332 - 120,432,482	52,484,929 - 52,485,092
singlet/doublet	singlet	singlet
Overlap gene	none
Upstream gene	Grip1, Helb, Irak3, Tmbim4, 1190005P17Rik, Hmga2, LOC100042902, Msrb3, LOC100043488, Lemd3
Downstream gene	Wif1, LOC100042911, 4930505D03Rik, LOC100043498, Gns, Rassf3, LOC100043500, Tbk1, Xpot, D930020B18Rik, BC048403, Srgap1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Grip1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74053 MGI:1921303
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Helb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:117599 MGI:2152895
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Irak3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73914 MGI:1921164
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmbim4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68212 MGI:1915462
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1190005P17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66225 MGI:1913475
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hmga2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15364 MGI:101761
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042902 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042902
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Msrb3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320183 MGI:2443538
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043488 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043488
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Lemd3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:380664 MGI:3580376
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wif1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:24117 MGI:1344332
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042911 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042911
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	4930505D03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74694 MGI:1921944
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 43 ESTs, 2 Proteins

name	LOC100043498 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043498
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 271 ESTs, 10 Proteins pseudo : _no_value

name	Gns (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75612 MGI:1922862
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rassf3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:192678 MGI:2179722
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043500 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043500
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Tbk1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56480 MGI:1929658
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Xpot (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73192 MGI:1920442
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D930020B18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:216393 MGI:2442001
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC048403 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:270802 MGI:2670984
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Srgap1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:117600 MGI:2152936
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Grip1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:41281632 GeneID:74053 MGI:1921303
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate receptor interacting protein 1 transcript_id : NM_133442.1

name	Grip1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19263325 GeneID:74053 MGI:1921303
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate receptor interacting protein 1 transcript_id : NM_028736.1

name	Grip1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19263333 GeneID:74053 MGI:1921303
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate receptor interacting protein 1 transcript_id : NM_130891.1

name	Helb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:17978261 GeneID:117599 MGI:2152895
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : helicase (DNA) B transcript_id : NM_080446.1

name	Irak3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142380077 GeneID:73914 MGI:1921164
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin-1 receptor-associated kinase 3 transcript_id : NM_028679.3

name	Tmbim4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365780 GeneID:68212 MGI:1915462
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane BAX inhibitor motif containing 4 transcript_id : NM_026617.2

name	1190005P17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328272 GeneID:66225 MGI:1913475
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1190005P17 gene transcript_id : NM_025431.2

name	Hmga2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144922693 GeneID:15364 MGI:101761
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : high mobility group AT-hook 2 transcript_id : NM_010441.2

name	LOC100042902 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261085 GeneID:100042902
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100042902 transcript_id : XM_001479027.1

name	Msrb3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:66793434 GeneID:320183 MGI:2443538
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : methionine sulfoxide reductase B3 transcript_id : NM_177092.3

name	LOC100043488 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261195 GeneID:100043488
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100043488 transcript_id : XM_001480758.1

name	Lemd3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487118 GeneID:380664 MGI:3580376
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LEM domain containing 3 transcript_id : NM_001081193.1

name	Wif1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755998 GeneID:24117 MGI:1344332
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Wnt inhibitory factor 1 transcript_id : NM_011915.1

name	LOC100042911 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261087 GeneID:100042911
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100042911 transcript_id : XM_001479048.1

name	4930505D03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149261089 GeneID:74694 MGI:1921944
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 43 ESTs, 2 Proteins product : RIKEN cDNA 4930505D03 gene transcript_id : XM_137322.8

name	Gns (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803025 GeneID:75612 MGI:1922862
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glucosamine (N-acetyl)-6-sulfatase transcript_id : NM_029364.2

name	Rassf3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129986 GeneID:192678 MGI:2179722
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Ras association (RalGDS/AF-6) domain family 3 transcript_id : NM_138956.3

name	LOC100043500 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261198 GeneID:100043500
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043500 transcript_id : XM_001480773.1

name	Tbk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366446 GeneID:56480 MGI:1929658
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TANK-binding kinase 1 transcript_id : NM_019786.3

name	Xpot (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486685 GeneID:73192 MGI:1920442
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : exportin, tRNA (nuclear export receptor for tRNAs) transcript_id : NM_001081056.1

name	D930020B18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119433658 GeneID:216393 MGI:2442001
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D930020B18 gene transcript_id : NM_177335.3

name	BC048403 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:41055589 GeneID:270802 MGI:2670984
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC048403 transcript_id : NM_173022.2

name	Srgap1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486649 GeneID:117600 MGI:2152936
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SLIT-ROBO Rho GTPase activating protein 1 transcript_id : NM_001081037.1

name	Grip1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41281633 GeneID:74053 MGI:1921303
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0045121 - lipid raft [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0008104 - protein localization [Evidence IMP] codon_start : 1 note : isoform 3 is encoded by transcript variant 3; eye blebs product : glutamate receptor interacting protein 1 isoform 3 protein_id : NP_597699.1

name	Grip1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19263326 CCDS:CCDS24202.1 GeneID:74053 MGI:1921303
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0045121 - lipid raft [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0008104 - protein localization [Evidence IMP] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; eye blebs product : glutamate receptor interacting protein 1 isoform 1 protein_id : NP_083012.1

name	Grip1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19263334 GeneID:74053 MGI:1921303
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0045121 - lipid raft [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0008104 - protein localization [Evidence IMP] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; eye blebs product : glutamate receptor interacting protein 1 isoform 2 protein_id : NP_570961.1

name	Helb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:17978262 CCDS:CCDS24203.1 GeneID:117599 MGI:2152895
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0004003 - ATP-dependent DNA helicase activity [Evidence IDA]; GO:0004386 - helicase activity [Evidence IEA] GO_process : GO:0006269 - DNA replication, synthesis of RNA primer [Evidence TAS]; GO:0006261 - DNA-dependent DNA replication [Evidence IDA] codon_start : 1 exception : mismatches in translation product : helicase (DNA) B protein_id : NP_536694.1

name	Irak3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543005 CCDS:CCDS24204.1 GeneID:73914 MGI:1921164
definition	GO_function : GO:0005524 - ATP binding [Evidence IDA]; GO:0016301 - kinase activity [Evidence IDA]; GO:0000287 - magnesium ion binding [Evidence IDA] [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IDA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0019221 - cytokine and chemokine mediated signaling pathway [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IDA]; GO:0043244 - regulation of protein complex disassembly [Evidence IDA]; GO:0007165 - signal transduction [Evidence IDA] codon_start : 1 product : interleukin-1 receptor-associated kinase 3 protein_id : NP_082955.2

name	Tmbim4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21311865 CCDS:CCDS24205.1 GeneID:68212 MGI:1915462
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : transmembrane BAX inhibitor motif containing 4 protein_id : NP_080893.1

name	1190005P17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313566 CCDS:CCDS24206.1 GeneID:66225 MGI:1913475
definition	codon_start : 1 product : hypothetical protein LOC66225 protein_id : NP_079707.1

name	Hmga2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754210 GeneID:15364 MGI:101761
definition	GO_component : GO:0000785 - chromatin [Evidence IEA]; GO:0005694 - chromosome [Evidence IEA]; GO:0000228 - nuclear chromosome [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0007001 - chromosome organization and biogenesis (sensu Eukaryota) [Evidence IEA]; GO:0006323 - DNA packaging [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : high mobility group protein I, isoform C product : high mobility group AT-hook 2 protein_id : NP_034571.1

name	LOC100042902 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261086 GeneID:100042902
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479077.1

name	Msrb3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893017 CCDS:CCDS24208.1 GeneID:320183 MGI:2443538
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence ISS]; GO:0005739 - mitochondrion [Evidence ISS] [Evidence IDA] GO_function : GO:0000318 - protein-methionine-R-oxide reductase activity [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence ISS] GO_process : GO:0030091 - protein repair [Evidence ISS] codon_start : 1 product : methionine-R-sulfoxide reductase B3 protein_id : NP_796066.1

name	LOC100043488 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261196 GeneID:100043488
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480808.1

name	Lemd3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487119 GeneID:380664 MGI:3580376
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS] [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005635 - nuclear envelope [Evidence IDA] [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : integral inner nuclear membrane protein MAN1 product : LEM domain containing 3 protein_id : NP_001074662.1

name	Wif1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755999 CCDS:CCDS24209.1 GeneID:24117 MGI:1344332
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0017147 - Wnt-protein binding [Evidence ISS] GO_process : GO:0007275 - development [Evidence IEA]; GO:0030178 - negative regulation of Wnt receptor signaling pathway [Evidence ISS]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 product : Wnt inhibitory factor 1 protein_id : NP_036045.1

name	LOC100042911 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261088 GeneID:100042911
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479098.1

name	4930505D03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149261090 GeneID:74694 MGI:1921944
definition	codon_start : 1 product : hypothetical protein LOC74694 protein_id : XP_137322.8

name	Gns (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29789239 CCDS:CCDS24210.1 GeneID:75612 MGI:1922862
definition	GO_function : GO:0008449 - N-acetylglucosamine-6-sulfatase activity [Evidence IEA]; GO:0008484 - sulfuric ester hydrolase activity [Evidence ISS] GO_process : GO:0030203 - glycosaminoglycan metabolism [Evidence IEA] codon_start : 1 product : glucosamine (N-acetyl)-6-sulfatase protein_id : NP_083640.1

name	Rassf3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20336742 CCDS:CCDS24211.1 GeneID:192678 MGI:2179722
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : Ras association domain family 3 product : Ras association (RalGDS/AF-6) domain family 3 protein_id : NP_620406.1

name	LOC100043500 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261199 GeneID:100043500
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480823.1

name	Tbk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981041 CCDS:CCDS24212.1 GeneID:56480 MGI:1929658
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006955 - immune response [Evidence IEA]; GO:0045087 - innate immune response [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 exception : mismatches in translation note : TANK binding kinase TBK1 product : TANK-binding kinase 1 protein_id : NP_062760.2

name	Xpot (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486686 GeneID:73192 MGI:1920442
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0000049 - tRNA binding [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : exportin, tRNA (nuclear export receptor for tRNAs) protein_id : NP_001074525.1

name	D930020B18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119433659 GeneID:216393 MGI:2442001
definition	codon_start : 1 product : hypothetical protein LOC216393 protein_id : NP_796309.2

name	BC048403 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41055590 CCDS:CCDS24213.1 GeneID:270802 MGI:2670984
definition	codon_start : 1 product : hypothetical protein LOC270802 protein_id : NP_766610.2

name	Srgap1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486650 GeneID:117600 MGI:2152936
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0005100 - Rho GTPase activator activity [Evidence IDA]; GO:0017048 - Rho GTPase binding [Evidence IDA] GO_process : GO:0016477 - cell migration [Evidence IDA]; GO:0007266 - Rho protein signal transduction [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : Rho GTPase activating protein 13 product : SLIT-ROBO Rho GTPase activating protein 1 protein_id : NP_001074506.1

name	LOC100043498 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149261197 GeneID:100043498
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 271 ESTs, 10 Proteins product : similar to ribosomal protein L21 pseudo : _no_value transcript_id : XR_034829.1

clone name	MSMg01-422J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-049F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-049F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-091N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-198F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-215N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295C07
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-220O19.b	B6Ng01-220O19.g
ACC	GA036361	GA036362
length	126	759
definition	B6Ng01-220O19.b	B6Ng01-220O19.g
singlet/doublet	singlet	singlet
BLAST hit	unique	unique
Map location.	(120,432,332 - 120,432,482)	(52,484,929 - 52,485,092)
sequence	acctccttaaatttttcagtgacagaataagaaagtttctatcctgtgtg gcaggtaggcagcactggaatatattcctcctcccctctcccctctcccc tctcccctctcccccctcccttcccc	gaattctccatagaaacagtgatataggcgaaaccgagaatataaagaga ggctaaaaaggatctacttcctgcctgcaaggtaggctaggacgacggca gcacagagcatgtggaagtagctaaccaatgtccgatttgacctaaggtc taatccatgagaaggaacccaaatccaacactgcttgggtgaccaagaac cagagagagactgactacacaacccagagatctagggtaaaaccaaacac tactggacttcaaaaaaaatcagtaaaatgatttctaatgataatctgct atactcacggatatgtaccttatccaggcattatcagagatgcttcctcc tacggtaaacgggatcagaatcaaagacccatagccagacatgagagaga gagagacagagagagagacagacagagagacagacagacagacatagata cagacagacagacagacagacagacagacacacacacacacacacacaca cacacacacagagcctctaaatggaaggtctcaatccaatctctccccac agagcttaggaaaccccatgggagaggagactgaaagagtttaagagcca ggggtgatggaggataccaggagaacaaggtcctctaattcaactaagca aggcatatatgagctcacagggacagaagcagcaagcatggggagtacct gagtctgttttaggttcttgtgtgtgtgtgtgcatgtgtgtgagtgtatg tgtgtgtgt
quality values	Open. Hide. 24 47 62 62 62 62 62 47 62 62 62 47 62 62 62 62 32 43 62 62 62 59 51 59 62 62 46 50 32 28 27 35 32 43 40 56 56 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 30 34 30 13 11 13 46 46 28 27 27 27 28 27 28 11 13 18 18 27 19 24 23 20 11 12 23 28 23 18	Open. Hide. 62 38 33 47 62 62 62 62 41 41 56 42 31 24 21 21 34 21 32 32 49 44 59 59 62 59 59 62 59 49 62 62 62 62 49 49 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 59 62 62 62 59 59 62 59 62 59 62 62 62 62 62 59 62 62 49 54 59 59 59 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 59 59 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 54 54 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 49 62 59 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 54 51 56 56 51 56 62 56 62 62 56 56 62 56 56 62 62 62 62 62 62 47 49 62 62 38 49 62 62 47 62 62 62 62 62 62 62 62 54 43 56 47 56 50 40 43 56 36 36 43 43 62 56 43 62 56 56 54 62 56 56 54 62 46 56 62 56 56 62 62 62 47 56 56 62 50 50 62 62 50 56 62 56 56 56 47 56 41 40 62 62 33 41 43 47 38 43 54 52 40 41 54 51 42 50 35 30 41 43 43 50 42 50 43 40 38 52 40 52 42 52 46 48 49 52 52 54 52 52 42 52 42 50 46 39 54 46 52 52 54 52 54 49 44 47 52 58 58 58 52 45 38 54 52 58 58 58 40 52 52 36 37 52 58 54 58 52 53 42 52 52 38 50 54 58 42 52 52 52 54 52 58 33 46 49 50 50 50 41 41 38 37 48 58 58 58 45 28 45 42 58 46 37 41 47 58 49 58 51 51 47 51 40 48 58 48 51 58 50 58 41 41 48 46 50 58 58 58 52 58 49 28 58 51 50 33 58 26 32 50 48 42 41 50 58 58 52 58 58 42 48 32 51 58 50 40 49 52 37 46 41 41 35 58 42 41 32 39 49 32 52 50 36 33 43 50 51 16 49 52 42 53 39 50 40 49 30 40 41 42 53 52 41 30 28 37 29 25 39 39 54 50 28 50 42 32 40 33 32 36 37 35 37 52 54 33 33 25 20 40 37 34 54 40 54 46 31 31 34 34 54 45 54 54 35 31 12 54 13 25 34 32 54 54 31 54 41 54 39 54 52 54 40 54 35 52 40 37 33 54 51 40 51 52 41 47 53 34 51 51 40 46 40 51 46 52 42 51 42 33 38 46 40

Alignment Information

BAC End 1

BAC End 2

seq1: chr10_120432332_120432482
seq2: B6Ng01-220O19.b_52_177

seq1  ACCTCCTTAAATTTTTCAGTGACAGAATAAGAAAGTTTCTATCCTGTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCTTAAATTTTTCAGTGACAGAATAAGAAAGTTTCTATCCTGTGTG  50

seq1  GCAGGTAGGCAGCACTGGAATATATTCCTCCTCCCCTCTCCCCTCTCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTAGGCAGCACTGGAATATATTCCTCCTCCCCTCTCCCCTCTCCCC  100

seq1  TCTCCCCTCTCCCCTCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCTTCCC  150
      |||||||||||||| ||||| |||||                        
seq2  TCTCCCCTCTCCCCCCTCCCTTCCCC------------------------  126

seq1  C  151
       
seq2  -  126

seq1: chr19_52484929_52485092
seq2: B6Ng01-220O19.g_459_825 (reverse)

seq1  ACACACACACATACACTCACACACA-CCACACACCACACACCA-CACATC  48
      |||||||||||||||||||||||||  |||||| ||||||| |  || | 
seq2  ACACACACACATACACTCACACACATGCACACA-CACACACAAGAACCTA  49

seq1  ACACAGACACAGACAC----------------------------------  64
      | |||||| |||  ||                                  
seq2  AAACAGACTCAGGTACTCCCCATGCTTGCTGCTTCTGTCCCTGTGAGCTC  99

seq1  ------------------------AGA-----------------------  67
                              |||                       
seq2  ATATATGCCTTGCTTAGTTGAATTAGAGGACCTTGTTCTCCTGGTATCCT  149

seq1  ----CACAC---------ACACACACACA-----CACACACA--------  91
          ||| |         | || |   ||     | | | ||        
seq2  CCATCACCCCTGGCTCTTAAACTCTTTCAGTCTCCTCTCCCATGGGGTTT  199

seq1  -------------------------------------CA--------CTC  96
                                           ||        |||
seq2  CCTAAGCTCTGTGGGGAGAGATTGGATTGAGACCTTCCATTTAGAGGCTC  249

seq1  ------------------------------TTTCTCTCTCTCTGTCTCTC  116
                                    | ||| ||| ||||||| ||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTCTGTCTGTCTGTC  299

seq1  TGTCTCTCTGTCTC----TCTGTCTCTCTGTCTCTCTGTCTCTCTCTCTC  162
      ||||| ||||| ||    ||||||| ||||||||||||||| ||||||||
seq2  TGTCTGTCTGTATCTATGTCTGTCTGTCTGTCTCTCTGTCTGTCTCTCTC  349

seq1  TC----------------  164
      ||                
seq2  TCTGTCTCTCTCTCTCTC  367

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BAC

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Alignment Information