BAC Information

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BAC

Clone NameB6Ng01-224J20
Chromosome19 (Build37)
Map Location 12,206,306 - 12,207,468
singlet/doubletsinglet
Overlap genenone
Upstream gene1700025F22Rik, Ms4a13, Ms4a12, Ms4a1, Ms4a5, Gm1276, Ms4a7, Ms4a4a, LOC435588, Ms4a4c, LOC433221, Ms4a4b, Ms4a6c, EG666926, Ms4a6b, Ms4a4d, LOC100040454, Ms4a6d, Ms4a2, Ms4a3, Plac1l, Oosp1, Gm97, Gif, EG666958, Mrpl16, Stx3, Olfr1417, Olfr1418, Olfr1419, EG622845, EG666985, Olfr1420, AV312086, Osbp, GA_x5J8B7W6KF8-6942124-6941700, Olfr1422-ps1, Olfr1423, Olfr1424, Olfr1425, Olfr1426, Olfr1427, Olfr1428, Olfr76
Downstream geneOlfr1555-ps1, Olfr1430-ps1, Olfr1431, Olfr1429-ps1, Olfr262, Olfr232, Olfr1433, Olfr1435-ps1, Olfr1436, Olfr1437, Olfr1438-ps1, Olfr1439-ps1, Olfr1440, Olfr1441, Pfpl, Mpeg1, Dtx4, EG625046, 4632417K18Rik, EG240549, Glyat, Olfr1442, Olfr1443, Keg1, Zfp91, Cntf, Lpxn, EG383436, Olfr1444, Olfr1445, Olfr1446, Olfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451, Olfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1, Olfr1457, EG667271
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-224J20.bB6Ng01-224J20.g
ACCGA039022GA039023
length1,1731,191
definitionB6Ng01-224J20.b B6Ng01-224J20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctgtctagctctgtactccactttaaagttggcttatttggag
gttaacttcttgagttctttatatattttggatattacccctctgttgga
tggagagttagtgaggattttttcccaaactgtaggttgctgattgttgg
tgtcttttgccttacagaagcttttcagttttatgaggtcccatttatcg
attgttgatcttagagcctgggccattagaaaatttgccttgtgtcaatg
agtttgaggctctttcccactttctcttctattagattcagtgtatctgg
ctttatgttgaggtccttgatccacttggatttgagctttgtacaaggta
ataaatatggatctattttcattttcctacatacagactgctagttagac
cagcactatttattgaagataattttcccccaccgtatatttttggcttc
tttgtcaaaagtcaagtgtccataggtgcgtggtgataaatgataagttt
tgccagttaaaatttctttaagtcatgttgtttttatttttcattcattt
attgtgatttacttccttatttatattgaaatatttatgttctagaaatg
aaatttatttgatctcagcgaataattactgactatgctgctgaatttag
tttgtctacacctcactgaagactgtaggtttttgatataacccactaga
aacttgtaagaaattttctttcttggtgctcattaaacaaagctgcttat
gatggaggtcctatttatggcaagccttggaacactaagcaactgctgca
cctgactattatcatattatctgtggttaccgtaactattagatgccttg
agtatttctagaaataatcataacttggaggttttaaactttcagtcaca
tcccagtcatacaactgtctccgtggagtcactaaaattgattttatttc
ttgtatattaattaagacttaaaatcataaggaaactttaattgtgcatt
atcatagagcttctcaaggtggaggtgtacaatatggaatcctcggtctg
tccctgtctcggtctcggcccaggactctggtccaggtccctaccacact
acttccccggtccccgggcctgggagatagggagggtcgaagggtgtgat
tctggggctcctcagtcactctc
gaattcacacttccacacacccatgtgccaggggtcagcccagcagcaga
gggggaagagtgtaggcagagggtgagattttgtcttaggagaaatttaa
ggttgctgtgtaataaaaagttcacttatctaagtgtaagttactaggct
attgtagctgacctgccttctgtgatcctctgagaccagaaactgcagtc
tctggcacttagcacctcaccctaaaacagcagaaaattaagtaaaggat
taattaaaaggctagagccttttccctattgtccagatgcctcttgcttg
tagggctaggggaaagtttggagcaataaacttctattgaaccaggaaaa
gagaataacactctgcagaaggaaaaacttttaacataagcaaatatgca
taatctcacataaattcatattcagcttctttcatgctcatttattcatt
ttcattcaaacccagttgggcacggcttgcatgcattctcacaattacat
acttacacacacatccatacttacatatgtgtatgcagcaaaggaccaag
cactggtgcagaaagaactcactcattctggatgaaaaatgcactccaat
ctttattacatagagaaagaaaaggcttctacttttttaatgctaaatga
attaaacccatgtttgtaagaagaaagctttgtttcttttaataagactt
aacctgcctgtccttaccatgtgacctgttctgtcccacgataaggagaa
gcctgcctgctctctgcaacatcttcatttttcctctttccctctgcatt
ctgcacattgctctcttagtattttatgttacctataatttctaagttac
tccactctgcattctccttctaatctaaaaagtagattagattagaatca
caggttctttctccccttctctgctaaaataatccctgctaatcctgggg
agccctctcattcccctgcatctgggaaccctacaggtggcctatcgcca
tttcatcatcccccatgctacaaattttatccaatttcctgaccattgca
cttttctctgttccctcagtacctgatctgcctcttatttccctcttgtc
ctctcctccctcccaggccccctccacggatcacctgtttcactctcaag
tgcaggactgaagcatccacacagccctggggctttccata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_12206306_12207468
seq2: B6Ng01-224J20.b_47_1219

seq1  GAATTCTCTGTCTAGCTCTGTACTCCACTTTAAAGTTGGCTTATTTGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTCTAGCTCTGTACTCCACTTTAAAGTTGGCTTATTTGGAG  50

seq1  GTTAACTTCTTGAGTTCTTTATATATTTTGGATATTACCCCTCTGTTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACTTCTTGAGTTCTTTATATATTTTGGATATTACCCCTCTGTTGGA  100

seq1  TGGAGAGTTAGTGAGGATTTTTTCCCAAACTGTAGGTTGCTGATTGTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAGTTAGTGAGGATTTTTTCCCAAACTGTAGGTTGCTGATTGTTGG  150

seq1  TGTCTTTTGCCTTACAGAAGCTTTTCAGTTTTATGAGGTCCCATTTATCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTTGCCTTACAGAAGCTTTTCAGTTTTATGAGGTCCCATTTATCG  200

seq1  ATTGTTGATCTTAGAGCCTGGGCCATTAGAAAATTTGCCTTGTGTCAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTGATCTTAGAGCCTGGGCCATTAGAAAATTTGCCTTGTGTCAATG  250

seq1  AGTTTGAGGCTCTTTCCCACTTTCTCTTCTATTAGATTCAGTGTATCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGAGGCTCTTTCCCACTTTCTCTTCTATTAGATTCAGTGTATCTGG  300

seq1  CTTTATGTTGAGGTCCTTGATCCACTTGGATTTGAGCTTTGTACAAGGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATGTTGAGGTCCTTGATCCACTTGGATTTGAGCTTTGTACAAGGTA  350

seq1  ATAAATATGGATCTATTTTCATTTTCCTACATACAGACTGCTAGTTAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATATGGATCTATTTTCATTTTCCTACATACAGACTGCTAGTTAGAC  400

seq1  CAGCACTATTTATTGAAGATAATTTTCCCCCACCGTATATTTTTGGCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACTATTTATTGAAGATAATTTTCCCCCACCGTATATTTTTGGCTTC  450

seq1  TTTGTCAAAAGTCAAGTGTCCATAGGTGCGTGGTGATAAATGATAAGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCAAAAGTCAAGTGTCCATAGGTGCGTGGTGATAAATGATAAGTTT  500

seq1  TGCCAGTTAAAATTTCTTTAAGTCATGTTGTTTTTATTTTTCATTCATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGTTAAAATTTCTTTAAGTCATGTTGTTTTTATTTTTCATTCATTT  550

seq1  ATTGTGATTTACTTCCTTATTTATATTGAAATATTTATGTTCTAGAAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGATTTACTTCCTTATTTATATTGAAATATTTATGTTCTAGAAATG  600

seq1  AAATTTATTTGATCTCAGCGAATAATTACTGACTATGCTGCTGAATTTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTATTTGATCTCAGCGAATAATTACTGACTATGCTGCTGAATTTAG  650

seq1  TTTGTCTACACCTCACTGAAGACTGTAGGTTTTTGATATAACCCACTAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTACACCTCACTGAAGACTGTAGGTTTTTGATATAACCCACTAGA  700

seq1  AACTTGTAAGAAATTTTCTTTCTTGGTGCTCATTAAACAAAGCTGCTTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGTAAGAAATTTTCTTTCTTGGTGCTCATTAAACAAAGCTGCTTAT  750

seq1  GATGGAGGTCCTATTTATGGCAAGCCTTGGAACACTAAGCAACTGCTGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAGGTCCTATTTATGGCAAGCCTTGGAACACTAAGCAACTGCTGCA  800

seq1  CCTGACTATTATCATATTATCTGTGGTTACCGTAACTATTAGATGCCTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACTATTATCATATTATCTGTGGTTACCGTAACTATTAGATGCCTTG  850

seq1  AGTATTTCTAGAAATAATCATAACTTGGAGGTTTTAAACTTTCAGTCACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTCTAGAAATAATCATAACTTGGAGGTTTTAAACTTTCAGTCACA  900

seq1  TCCCAGTCATACAACTGTCTCCGTGGAGTCACTAAAAATGATTTTATTTC  950
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TCCCAGTCATACAACTGTCTCCGTGGAGTCACTAAAATTGATTTTATTTC  950

seq1  TTGTATATTAA-TAAGACTTAAAATCATAAGGAAAC-TTAATTGTGCA-T  997
      ||||||||||| |||||||||||||||||||||||| ||||||||||| |
seq2  TTGTATATTAATTAAGACTTAAAATCATAAGGAAACTTTAATTGTGCATT  1000

seq1  ATCATAGAGCTTCTCAAG--TGAAGTGTACAATAT-GAAT-CTCTGTCTG  1043
      ||||||||||||||||||   || ||||||||||| |||| ||| |||||
seq2  ATCATAGAGCTTCTCAAGGTGGAGGTGTACAATATGGAATCCTCGGTCTG  1050

seq1  TCTCTGTCTCTGTCTCTGTCTCTGTCTCT-GTCTCTGTCTCTCTCTCTCT  1092
      || ||||||| ||||| | |   | |||| |||   ||| ||  | | ||
seq2  TCCCTGTCTCGGTCTCGGCCCAGGACTCTGGTCCAGGTCCCTACCACACT  1100

seq1  CTCTCTCTCTGTCTCTGTCTCTGAG---TATGTA-GGTCAGAGGTTGATA  1138
        ||  | | ||| | |   ||| |   || | | ||||  ||| ||  |
seq2  -ACTTCCCCGGTCCCCGGGCCTGGGAGATAGGGAGGGTCGAAGGGTGTGA  1149

seq1  -TCTGGCGCTTTCCTCAGTCACTCTC  1163
       ||||| ||  |||||||||||||||
seq2  TTCTGGGGC--TCCTCAGTCACTCTC  1173