BAC Information

Click to search

BAC

Clone NameB6Ng01-225B21
Chromosome19 (Build37)
Map Location 14,226,829 - 14,228,009
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr1460-ps1, Olfr1461, Olfr1462, Olfr1463, LOC667300, Olfr1465, Olfr1466, Olfr1467, Olfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472, Olfr1473-ps1, Olfr1474, Olfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655, Olfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653, Olfr1487, GA_x5J8B7W6KF8-5425983-5425664, Olfr1489, Olfr1490, Olfr1491, Olfr1492-ps1, Olfr1493-ps1, Olfr1494, Olfr1495, Olfr1496, Olfr1497, Olfr1498-ps1, Olfr1499, Olfr1500, Olfr1501, Olfr1502, Olfr1503-ps1, Olfr1504, Olfr1505
Downstream geneEG667433, Tle4, EG433225
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-225B21.bB6Ng01-225B21.g
ACCGA039393GA039394
length1,1691,171
definitionB6Ng01-225B21.b B6Ng01-225B21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatttaaactttgcctcagcaactatgcttgacatggtgtttaaa
ttactttatgttttcagtaagtttagtgattagtgagattgaagacaggt
tccacacgctgtagatttctactggcttgttagttttttttttctttaat
ataaaagtatgttgaacaaagtttgaaaaagattttaagctaatcatgaa
aattatacaaatatgtttctccccaattacttttacttgtttcttaagta
tttaaaatgaaatttgatgaatattttataagcattaatcaatattaatc
aataatacatgattactcattattcatttttcaatagctttgaaaaattt
cagaaagcactttttttgtgtttgaatgaaaagtcttccagaagttgctc
atcagggttatatttagccttatttaaaatattatgactaaaaaggttgt
ccattctccttcctattgttctctgattatctctaaagaccataaagcca
gtaaccagacctctcttctttccaaggtatcatctcagaagcagacgtgg
cttgaagcttactgggtattgggatacagtctacttttaaatgataacag
aattttcacaagatcaagtgcttcattatgaggctatcattttccacacc
tagttgaaagttcttgacaatagctttattggtttatgaagttgttagag
acaatggcaatattagaaatacttatgcaatacattgttaaggtgcctat
catgatcgagtatagacaacttatagaacgcccaaaattagatcgacttt
tcccttcaaatagttatttgagcatctatttttaatctacctatttcttc
accatacctctgagtcttgaggtattttgatagtctcgtccattttcaat
gatatttctatacatgtattatttatttcctcatatcattttaggggact
ggaaattcaccataacaaccaatctttgcacagagtcattatgtgaaata
ggatggggaaagactgctgataagagcacagagagagcaaacttagtgca
gtgaatttttttttttttttttggctttgtcttttcttgcaactaaaggc
tttcttcgaaactactgaaaattaccctctgactttataatttaatgcaa
gagaagtaatgatagcttt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatacaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatatccaagatataaggtacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggaggtacagagacaaagtttggagctgagataa
aaagatggaccatgtagagactgccatatccagggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagattatgctgaaa
ggaccctgatatagctgtctcttgtcagagtatgcctgggcctagcaaac
attgaagtggatgctcacagtcggctattggatgggatcacatggcccca
atgaaggagctagagaaagtacccaagaagctaaagggatctgcaaccct
atagtgaacacattatgaactaaccagtaccccgagctctgactctagct
gcatatatatcaaagattgcttagtcgcaatcactgcaaaggaagctcaa
ttgaacactgcaactttaatgccagttacaggaacgtcagtctaaaggta
tgtgggtggtttaagggaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_14226829_14228009
seq2: B6Ng01-225B21.b_44_1212 (reverse)

seq1  AAAGCTATCAATTAACTTCTCTTTCCTTTGCATTATAATATTATAAAATT  50
      ||||||||||  | |||||||      |||||||   | ||||||||   
seq2  AAAGCTATCA--TTACTTCTC------TTGCATT---AAATTATAAA--G  37

seq1  TAAGAGGGTATATTTCAGTAGTTTCGGAAGAAAGCTTTTAAGTTGCA--G  98
      | ||||||||  ||||||||||||| ||||||||| ||| |||||||   
seq2  TCAGAGGGTAATTTTCAGTAGTTTC-GAAGAAAGCCTTT-AGTTGCAAGA  85

seq1  AAAGACAAAGCCAAAAAAAAAAAAAAA---TCACTGCACTAAGTTTGCTC  145
      |||||||||||||||||||||||||||   ||||||||||||||||||||
seq2  AAAGACAAAGCCAAAAAAAAAAAAAAAAATTCACTGCACTAAGTTTGCTC  135

seq1  TCTCTGTGCTCTTATTCAGCAGTCTTTCCCCATCCTATTTCACATAATGA  195
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TCTCTGTGCTCTTA-TCAGCAGTCTTTCCCCATCCTATTTCACATAATGA  184

seq1  CTCTGTGCAAAGATTGGTTGTTTATGGTGAATTTCCAGTCCCCTAAAATG  245
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CTCTGTGCAAAGATTGGTTG-TTATGGTGAATTTCCAGTCCCCTAAAATG  233

seq1  ATATGAGGAAATAAATAATACATGTATAGAAATATCATTGAAAATGGACG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAGGAAATAAATAATACATGTATAGAAATATCATTGAAAATGGACG  283

seq1  AGACTATCAAAATACCTCAAGACTCAGAGGTATGGTGAAGAAATAGGTAG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTATCAAAATACCTCAAGACTCAGAGGTATGGTGAAGAAATAGGTAG  333

seq1  ATTAAAAATAGATGCTCAAATAACTATTTGAAGGGAAAAGTCGATCTAAT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAATAGATGCTCAAATAACTATTTGAAGGGAAAAGTCGATCTAAT  383

seq1  TTTGGGCGTTCTATAAGTTGTCTATACTCGATCATGATAGGCACCTTAAC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGCGTTCTATAAGTTGTCTATACTCGATCATGATAGGCACCTTAAC  433

seq1  AATGTATTGCATAAGTATTTCTAATATTGCCATTGTCTCTAACAACTTCA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTATTGCATAAGTATTTCTAATATTGCCATTGTCTCTAACAACTTCA  483

seq1  TAAACCAATAAAGCTATTGTCAAGAACTTTCAACTAGGTGTGGAAAATGA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCAATAAAGCTATTGTCAAGAACTTTCAACTAGGTGTGGAAAATGA  533

seq1  TAGCCTCATAATGAAGCACTTGATCTTGTGAAAATTCTGTTATCATTTAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTCATAATGAAGCACTTGATCTTGTGAAAATTCTGTTATCATTTAA  583

seq1  AAGTAGACTGTATCCCAATACCCAGTAAGCTTCAAGCCACGTCTGCTTCT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGACTGTATCCCAATACCCAGTAAGCTTCAAGCCACGTCTGCTTCT  633

seq1  GAGATGATACCTTGGAAAGAAGAGAGGTCTGGTTACTGGCTTTATGGTCT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGATACCTTGGAAAGAAGAGAGGTCTGGTTACTGGCTTTATGGTCT  683

seq1  TTAGAGATAATCAGAGAACAATAGGAAGGAGAATGGACAACCTTTTTAGT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGATAATCAGAGAACAATAGGAAGGAGAATGGACAACCTTTTTAGT  733

seq1  CATAATATTTTAAATAAGGCTAAATATAACCCTGATGAGCAACTTCTGGA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATATTTTAAATAAGGCTAAATATAACCCTGATGAGCAACTTCTGGA  783

seq1  AGACTTTTCATTCAAACACAAAAAAAGTGCTTTCTGAAATTTTTCAAAGC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTTTCATTCAAACACAAAAAAAGTGCTTTCTGAAATTTTTCAAAGC  833

seq1  TATTGAAAAATGAATAATGAGTAATCATGTATTATTGATTAATATTGATT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAAAAATGAATAATGAGTAATCATGTATTATTGATTAATATTGATT  883

seq1  AATGCTTATAAAATATTCATCAAATTTCATTTTAAATACTTAAGAAACAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTTATAAAATATTCATCAAATTTCATTTTAAATACTTAAGAAACAA  933

seq1  GTAAAAGTAATTGGGGAGAAACATATTTGTATAATTTTCATGATTAGCTT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAGTAATTGGGGAGAAACATATTTGTATAATTTTCATGATTAGCTT  983

seq1  AAAATCTTTTTCAAACTTTGTTCAACATACTTTTATATTAAAGAAAAAAA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTTTTTCAAACTTTGTTCAACATACTTTTATATTAAAGAAAAAAA  1033

seq1  AAACTAACAAGCCAGTAGAAATCTACAGCGTGTGGAACCTGTCTTCAATC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAACAAGCCAGTAGAAATCTACAGCGTGTGGAACCTGTCTTCAATC  1083

seq1  TCACTAATCACTAAACTTACTGAAAACATAAAGTAATTTAAACACCATGT  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTAATCACTAAACTTACTGAAAACATAAAGTAATTTAAACACCATGT  1133

seq1  CAAGCATAGTTGCTGAGGCAAAGTTTAAATGAATTC  1181
      ||||||||||||||||||||||||||||||||||||
seq2  CAAGCATAGTTGCTGAGGCAAAGTTTAAATGAATTC  1169