BAC Information

Click to search

BAC

Clone NameB6Ng01-226F05
Chromosome19 (Build37)
Map Location 12,530,771 - 12,531,346
singlet/doubletsinglet
Overlap genenone
Upstream geneMs4a4b, Ms4a6c, EG666926, Ms4a6b, Ms4a4d, LOC100040454, Ms4a6d, Ms4a2, Ms4a3, Plac1l, Oosp1, Gm97, Gif, EG666958, Mrpl16, Stx3, Olfr1417, Olfr1418, Olfr1419, EG622845, EG666985, Olfr1420, AV312086, Osbp, GA_x5J8B7W6KF8-6942124-6941700, Olfr1422-ps1, Olfr1423, Olfr1424, Olfr1425, Olfr1426, Olfr1427, Olfr1428, Olfr76, Olfr1555-ps1, Olfr1430-ps1, Olfr1431, Olfr1429-ps1, Olfr262, Olfr232, Olfr1433, Olfr1435-ps1, Olfr1436, Olfr1437, Olfr1438-ps1, Olfr1439-ps1, Olfr1440, Olfr1441, Pfpl
Downstream geneMpeg1, Dtx4, EG625046, 4632417K18Rik, EG240549, Glyat, Olfr1442, Olfr1443, Keg1, Zfp91, Cntf, Lpxn, EG383436, Olfr1444, Olfr1445, Olfr1446, Olfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451, Olfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1, Olfr1457, EG667271, Olfr1459, Olfr1460-ps1, Olfr1461, Olfr1462, Olfr1463, LOC667300, Olfr1465, Olfr1466, Olfr1467, Olfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-226F05.bB6Ng01-226F05.g
ACCGA040296GA040297
length1,205996
definitionB6Ng01-226F05.b B6Ng01-226F05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccattttttaatggggttatttgatt
ttatggagtacaccttcttgagttttttatatatattggatattcgtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgactgtgtcttttgccttacagaagctttgaaatttta
tgtggtcccatttgttgattctcgatcttacagagagagcagatgctggt
gaggatgtgtagaaagagatacgctcctccattgttggtgggattgcaag
cttgtacaaccactctggaaatcagtctggcggttcctcagaaaattgga
catagtactactggaggaaccctgcaatacctctcctgggcatatatcca
gaagatgttccaactataagaaggacacatgatccactatgttcatagca
gccttatttataatagccagaagctggaaagaacccagaagcccctcaac
agaggaatggatacagaaaatgtggtacatttatacaatggagtactact
cagctattaaaagaatgaatttatgaaattcctaggcaaatggatggacc
tgtagggcatcatcctgagtgaggtaacccaatcacaaaagaactcacat
gatatgtactcactgataagtggatattagcccagaatcttagaataccc
aagatacaagatacaatttgcaaaacacatgaaactcaagaagaatgaag
accaaagtgtggacactttgccctttcttagaattgggaacaaaacaccc
atggaaggagttacagagacaaagtttggagctgagatgaaagaatggac
catctagagactaacattcctggggatccatcccataatatgcctccaaa
tgctgacaccattgcatacactagcaagattttgctgaaagatccctgat
atagctgtctcttgtgagtctatgccggggcctagtaaacacagaagtgg
atgctcacagtcagctattggatggatcacagtccaatggagagctagaa
gaaagtacccaaggagctaaggatctgcaccttatagtgaacaacaatat
gaaacttacaattacccgccaccctcgagcttatgttcctagctgcatat
agcgaaagatggcttagtctagcatctactgtgagaagaaatgaggtcct
agatg
gaattctctaggtaggccaggctgaccttgaactcatggagcttccacca
tgccaaaacaaggagtctttgaaggtctgttgaagcaaaaacacaattct
cacctcaaggagaaaaaaaaagcatcatttattctaggttcaaatatgag
tgatctgtaaacagattcaggtcactccaacatccaagcagtttcatgaa
gtttttatagagaaagaacaaggacattcataaatcaaggagttttttaa
atgcagtggtgggaacaccaggtagtgggcttgagcaaaacttcaaagtc
ttccgtataagtctcagatgccatctgatggcattcttagcctttaggtt
ggtggaagccaggggtttgtttctacatcccaaaaaggattttatctgat
agcaagaaggattaggtcagtcgtgggggtaggcaataaatggctgttat
agagactagagaacgctcatgataacctggctttgatcatgtaacaccac
acggtttacaattgtgacgttgtattatcagtcaactcctcaacatcact
ggagcagcctttgttccggaacctttaattcactgtttctggctttggtt
ataaatcgcatatttgcatgggtaggccaaataccatttcgtggccattg
gtgctggaaagccggattcctaggaactaatagaaatgagattgacgagg
aaggaaagcagacttctagagagcaagacagagttggtaaaggcattaag
ggagaaacctctctagccatcatgatccaagtttgattttgtgtatcaaa
tacaacatttatatgttatatataacagacacattatacctaaagataaa
agaattaaggacacaggatagcctaaagatgtaaaggcagtagaagaaag
aaacagttattttaaccactcaaaaaccttcattttaaaaaatatttatt
cacttagttttatgtgcacagtctgtgtacgtgtcctcttgtcaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_12530771_12531346
seq2: B6Ng01-226F05.g_65_640 (reverse)

seq1  AAAGGTTCCGGAACAAAGGCTGCTCCAGTGATGTTGAGGAGTTGACTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTTCCGGAACAAAGGCTGCTCCAGTGATGTTGAGGAGTTGACTGAT  50

seq1  AATACAACGTCACAATTGTAAACCGTGTGGTGTTACATGATCAAAGCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAACGTCACAATTGTAAACCGTGTGGTGTTACATGATCAAAGCCAG  100

seq1  GTTATCATGAGCGTTCTCTAGTCTCTATAACAGCCATTTATTGCCTACCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCATGAGCGTTCTCTAGTCTCTATAACAGCCATTTATTGCCTACCC  150

seq1  CCACGACTGACCTAATCCTTCTTGCTATCAGATAAAATCCTTTTTGGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGACTGACCTAATCCTTCTTGCTATCAGATAAAATCCTTTTTGGGAT  200

seq1  GTAGAAACAAACCCCTGGCTTCCACCAACCTAAAGGCTAAGAATGCCATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAACAAACCCCTGGCTTCCACCAACCTAAAGGCTAAGAATGCCATC  250

seq1  AGATGGCATCTGAGACTTATACGGAAGACTTTGAAGTTTTGCTCAAGCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGCATCTGAGACTTATACGGAAGACTTTGAAGTTTTGCTCAAGCCC  300

seq1  ACTACCTGGTGTTCCCACCACTGCATTTAAAAAACTCCTTGATTTATGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACCTGGTGTTCCCACCACTGCATTTAAAAAACTCCTTGATTTATGAA  350

seq1  TGTCCTTGTTCTTTCTCTATAAAAACTTCATGAAACTGCTTGGATGTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTGTTCTTTCTCTATAAAAACTTCATGAAACTGCTTGGATGTTGG  400

seq1  AGTGACCTGAATCTGTTTACAGATCACTCATATTTGAACCTAGAATAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACCTGAATCTGTTTACAGATCACTCATATTTGAACCTAGAATAAAT  450

seq1  GATGCTTTTTTTTTCTCCTTGAGGTGAGAATTGTGTTTTTGCTTCAACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTTTTTTTTTCTCCTTGAGGTGAGAATTGTGTTTTTGCTTCAACAG  500

seq1  ACCTTCAAAGACTCCTTGTTTTGGCATGGTGGAAGCTCCATGAGTTCAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCAAAGACTCCTTGTTTTGGCATGGTGGAAGCTCCATGAGTTCAAG  550

seq1  GTCAGCCTGGCCTACCTAGAGAATTC  576
      ||||||||||||||||||||||||||
seq2  GTCAGCCTGGCCTACCTAGAGAATTC  576