BAC Information

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BAC

Clone NameB6Ng01-229C12
Chromosome19 (Build37)
Map Location 32,048,829 - 32,218,068
singlet/doubletdoublet
Overlap geneAsah2, EG668042, Sgms1
Upstream genePrkg1, Cstf2t, 8430431K14Rik, 1810073H04Rik
Downstream gene2700046G09Rik, LOC100042138, LOC672490, LOC100042823, Minpp1, Papss2, Atad1, Pten, B430203M17Rik, 6530404N21Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-229C12.bB6Ng01-229C12.g
ACCGA042382GA042383
length1,1731,147
definitionB6Ng01-229C12.b B6Ng01-229C12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,048,829 - 32,050,023)(32,216,937 - 32,218,068)
sequence
gaattcttctgacaaatggagattctccagatacttaaaagttacactca
tataagaatttatcaaggcctaggaaataggggggttgtggtattgcatt
attcatgagaaggtctgctagagcagaaccccctggtgctagccttcata
aggctcaaaagagtagcattatggtgtgaaatccttacctgtcattaagc
tgaccctaggcaggactgctttatcattactgtaaacacctacctggttc
ctgtaagtccctttgaagtcactcctttgttttgtgtcaggcaacttcaa
tgtactttgcctgctgtgacttcctaccccctttattttctgtcctatac
aagactggtgttcactttgtgacaatacattcagattctacacaatttcc
tgtgtgcatctgtctgtcattcccgccgactccttgcccacctgtgacta
gagaccctttccacgcagacaaagggacccagagggtctgcagcagggga
tacttgggtttgtattcattttaatagttattacagagaaatgctaccaa
tcagatcacatttaggcactggggccagaatggctaacacatagctgact
caggctggagagatggctcagccattaaaggttacgcttccaatcaaaat
atgagaggactccataggtctacattataagagagtgagttgccaggaag
agagttggcacaaaaaaaaatggaaaaaagggaaaagaagctatgttagg
tgaggtggttctctgagcaggggtcacttagctaaatggtaaagggttgg
tggaaagagcagccacccagaggggatgacaaatgtagatcatctacaaa
ctacagaaatgaaaaatacctaaattatacagttatacagcctaccattc
aaaatgacaacttaaataagatgggtctagaaaataatttcttcacaaat
agtagaagatggcgagactaaatactatatatactaaaatatctataggg
taatagagagatccaggaagagctttctcagaagtgaaaaatgaatgaat
gatgaaatgaatgaattgaatgatgaatgaaatattggagtcaccacacc
gatggttcgaacgactctcagaaaacagaatcagcaccacactgagatct
aagaaagttagacaaagagcagg
gaattcataggacttgggatattcatgtattcatcccaagaaactagtgc
ttcttgttcttgttcatattttgtagctgcctgtctattcctgccctgtg
tgagggatttccagatttcatttctagagctcttgccccattttatttat
tctgaggcagcagagttaccaggagccttgtcagggttgggctctgtctt
ccatggttcttttctttgatggtctcctacgcacactgctgtagcagttt
agcggccgacttcttaaacagcagaacatctatagttctcgttctgatgc
cattctcagcatctctgctgtttggacagagatgctgaacatttgccacc
tgcgctgcacaggctctggccattctggacgggctccacttgtccatcat
ttgagcggcagcaacgcagacttaaggcccgtgaggcctgatttgtagca
ctgtggatcactgtggttccttttggccagttaatggcacgttggttttt
tggtttttttgttttttgggttttttttttatgtacacctgacgttagtc
tgcgatgccccatccaggtcttttgctagtgaaacttgtagcactctgat
ttcaagctcttgactagatttctgggtttgttttgttgggtcattgaaaa
ctttgagtaaatgaaactgcggaatttcttgactgagaatctgccctgtt
tttccctttttctaggtctattattagcagaagatttttctgcatagttg
gcacgctgtacctgtatcggtgtattacaatgtatgtaactacactccca
gtacctggcatgcatttcaactgttctccgaaggtaaactactcctccct
gtcatttcccacttttgtttgtttctcttcttgccctgggaccttagact
aaggccaagatgaaaactgattaagattcatttctgggaatgtccctaag
ctataggaccagagagccacgcccttcttcaggattccctagcttcgcag
cccctcccagcttagaccaatgggagctttatatggggaagtggagctct
tttgtatcctggccaagaactaattaaatattgttctcctttctgttgga
gctatatggaattgctccttcggcttggaaacaggcaggatccactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_32048829_32050023
seq2: B6Ng01-229C12.b_46_1218

seq1  GAATTCTTCTGACAAATGGAGATTCTCCAGATACTTAAAAGTTACACTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTGACAAATGGAGATTCTCCAGATACTTAAAAGTTACACTCA  50

seq1  TATAAGAATTTATCAAGGCCTAGGAAATAGGGGGGTTGTGGTATTGCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGAATTTATCAAGGCCTAGGAAATAGGGGGGTTGTGGTATTGCATT  100

seq1  ATTCATGAGAAGGTCTGCTAGAGCAGAACCCCCTGGTGCTAGCCTTCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATGAGAAGGTCTGCTAGAGCAGAACCCCCTGGTGCTAGCCTTCATA  150

seq1  AGGCTCAAAAGAGTAGCATTATGGTGTGAAATCCTTACCTGTCATTAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCAAAAGAGTAGCATTATGGTGTGAAATCCTTACCTGTCATTAAGC  200

seq1  TGACCCTAGGCAGGACTGCTTTATCATTACTGTAAACACCTACCTGGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCTAGGCAGGACTGCTTTATCATTACTGTAAACACCTACCTGGTTC  250

seq1  CTGTAAGTCCCTTTGAAGTCACTCCTTTGTTTTGTGTCAGGCAACTTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAGTCCCTTTGAAGTCACTCCTTTGTTTTGTGTCAGGCAACTTCAA  300

seq1  TGTACTTTGCCTGCTGTGACTTCCTACCCCCTTTATTTTCTGTCCTATAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTTTGCCTGCTGTGACTTCCTACCCCCTTTATTTTCTGTCCTATAC  350

seq1  AAGACTGGTGTTCACTTTGTGACAATACATTCAGATTCTACACAATTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTGGTGTTCACTTTGTGACAATACATTCAGATTCTACACAATTTCC  400

seq1  TGTGTGCATCTGTCTGTCATTCCCGCCGACTCCTTGCCCACCTGTGACTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGCATCTGTCTGTCATTCCCGCCGACTCCTTGCCCACCTGTGACTA  450

seq1  GAGACCCTTTCCACGCAGACAAAGGGACCCAGAGGGTCTGCAGCAGGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCCTTTCCACGCAGACAAAGGGACCCAGAGGGTCTGCAGCAGGGGA  500

seq1  TACTTGGGTTTGTATTCATTTTAATAGTTATTACAGAGAAATGCTACCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGGGTTTGTATTCATTTTAATAGTTATTACAGAGAAATGCTACCAA  550

seq1  TCAGATCACATTTAGGCACTGGGGCCAGAATGGCTAACACATAGCTGACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATCACATTTAGGCACTGGGGCCAGAATGGCTAACACATAGCTGACT  600

seq1  CAGGCTGGAGAGATGGCTCAGCCATTAAAGGTTACGCTTCCAATCAAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTGGAGAGATGGCTCAGCCATTAAAGGTTACGCTTCCAATCAAAAT  650

seq1  ATGAGAGGACTCCATAGGTCTACATTATAAGAGAGTGAGTTGCCAGGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAGGACTCCATAGGTCTACATTATAAGAGAGTGAGTTGCCAGGAAG  700

seq1  AGAGTTGGCACAAAAAAAAATGGAAAAAAGGGAAAAGAAGCTATGTTAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTGGCACAAAAAAAAATGGAAAAAAGGGAAAAGAAGCTATGTTAGG  750

seq1  TGAGGTGGTTCTCTGAGCAGGGGTCACTTAGCTAAATGGTAAGGGGTTGG  800
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TGAGGTGGTTCTCTGAGCAGGGGTCACTTAGCTAAATGGTAAAGGGTTGG  800

seq1  TGGAAAGAGCAGGCCACCCAGAGGGGATGACAAATGTAGATCATCTACAA  850
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAGAGCA-GCCACCCAGAGGGGATGACAAATGTAGATCATCTACAA  849

seq1  ACTACAGAAAATGAAAAATACCTAAAATATACAG-TATACAGCCTACCAT  899
      ||||||| |||||||||||||||||| ||||||| |||||||||||||||
seq2  ACTACAG-AAATGAAAAATACCTAAATTATACAGTTATACAGCCTACCAT  898

seq1  TCAAAAATGACAACTTAAATAAGAT-GGTCTAGAAAATAATTTCTTCACA  948
      || |||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TC-AAAATGACAACTTAAATAAGATGGGTCTAGAAAATAATTTCTTCACA  947

seq1  AATAGTAG-AGATGGCGAGACTAAATACTATATATACT-AAATATCTATA  996
      |||||||| ||||||||||||||||||||||||||||| |||||||||||
seq2  AATAGTAGAAGATGGCGAGACTAAATACTATATATACTAAAATATCTATA  997

seq1  GGTAAATAGAGAAGAATCACAGAAGAGCTTTCTCAGAAGTGAAAAATGAA  1046
      ||  ||||||||   |||   ||||||||||||||||||||||||||| |
seq2  GGGTAATAGAGA--GATCCAGGAAGAGCTTTCTCAGAAGTGAAAAATG-A  1044

seq1  ATGAAATGAAATGAAATGAAATGAAATGAAATGAAATGAAATGAAATAAA  1096
      ||| ||||  |||||||| |||||| || ||||  ||| ||||||||  |
seq2  ATG-AATG--ATGAAATG-AATGAATTG-AATG--ATG-AATGAAAT--A  1084

seq1  TTGAAGTCACCACACCCAGATGGTTTCAGAACAGAACTCCAAGAAAACAA  1146
      ||| ||||||||||||  |||||||   ||||   ||||  |||||||| 
seq2  TTGGAGTCACCACACC--GATGGTT--CGAAC--GACTCTCAGAAAACAG  1128

seq1  GATCAGGCAACACACCTGAGATCTAAGAAAGTATAGACAAAGAAGCAGG  1195
       |||| ||| |||| ||||||||||||||||| ||||||||| ||||||
seq2  AATCA-GCACCACA-CTGAGATCTAAGAAAGT-TAGACAAAG-AGCAGG  1173

seq1: chr19_32216937_32218068
seq2: B6Ng01-229C12.g_66_1212 (reverse)

seq1  GAGTGG-GCCTGCCTGTCTC--AGCGGA--GAGCATTCCC--ATAGCTCC  43
      ||||||  ||||||||| ||  ||| ||  ||||| | ||  ||||||||
seq2  GAGTGGATCCTGCCTGTTTCCAAGCCGAAGGAGCAATTCCATATAGCTCC  50

seq1  -ACAG-AAGGAGAAC-ATATTTAA-TAG-TCT--GGCAGGATAC-AAAGA  85
       |||| ||||||||| |||||||| ||| |||  | |||||||| |||||
seq2  AACAGAAAGGAGAACAATATTTAATTAGTTCTTGGCCAGGATACAAAAGA  100

seq1  GCTCCACT--CCCATATAAAGCTCCCATTGGTTCTAAGCTGGGAGGGGCT  133
      ||||||||  ||||||||||||||||||||| ||||||||||||||||||
seq2  GCTCCACTTCCCCATATAAAGCTCCCATTGG-TCTAAGCTGGGAGGGGCT  149

seq1  GGCGAAGCTAGGGAATTCTG-AGAAGGGCGTGGCTCTCTGGTCCTATAGC  182
       ||||||||||||||| ||| |||||||||||||||||||||||||||||
seq2  -GCGAAGCTAGGGAATCCTGAAGAAGGGCGTGGCTCTCTGGTCCTATAGC  198

seq1  TTAGGGACATTCCCAGAAATGAATCTTAATCAGTTTTCATCTTGGCCTTA  232
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGACATTCCCAGAAATGAATCTTAATCAGTTTTCATCTTGGCCTTA  248

seq1  GTCTAAGGTCCCCAGGGCAAGAAGAGAAACAAACAAAAGTGGGAAATGAC  282
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAAGGT-CCCAGGGCAAGAAGAGAAACAAACAAAAGTGGGAAATGAC  297

seq1  AGGGAGGAGTAGTTTACCTTCGGAGAACAGTTGAAATGCATGCCAGGTAC  332
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGGAGTAGTTTACCTTCGGAGAACAGTTGAAATGCATGCCAGGTAC  347

seq1  TGGGAGTGTAGTTACATACATTGTAATACACCGATACAGGTACAGCGTGC  382
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGTGTAGTTACATACATTGTAATACACCGATACAGGTACAGCGTGC  397

seq1  CAACTATGCAGAAAAATCTTCTGCTAATAATAGACCTAGAAAAAGGGAAA  432
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTATGCAGAAAAATCTTCTGCTAATAATAGACCTAGAAAAAGGGAAA  447

seq1  AACAGGGCAGATTCTCAGTCAAGAAATTCCGCAGTTTCATTTACTCAAAG  482
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGGCAGATTCTCAGTCAAGAAATTCCGCAGTTTCATTTACTCAAAG  497

seq1  TTTTCAATGACCCAACAAAACAAACCCAGAAATCTAGTCAAGAGCTTGAA  532
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAATGACCCAACAAAACAAACCCAGAAATCTAGTCAAGAGCTTGAA  547

seq1  ATCAGAGTGCTACAAGTTTCACTAGCAAAAGACCTGGATGGGGCATCGCA  582
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAGTGCTACAAGTTTCACTAGCAAAAGACCTGGATGGGGCATCGCA  597

seq1  GACTAACGTCAGGTGTACATAAAAAAAAAACCCAAAAAACAAAAAAACCA  632
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAACGTCAGGTGTACATAAAAAAAAAACCCAAAAAACAAAAAAACCA  647

seq1  AAAAACCAACGTGCCATTAACTGGCCAAAAGGAACCACAGTGATCCACAG  682
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACCAACGTGCCATTAACTGGCCAAAAGGAACCACAGTGATCCACAG  697

seq1  TGCTACAAATCAGGCCTCACGGGCCTTAAGTCTGCGTTGCTGCCGCTCAA  732
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACAAATCAGGCCTCACGGGCCTTAAGTCTGCGTTGCTGCCGCTCAA  747

seq1  ATGATGGACAAGTGGAGCCCGTCCAGAATGGCCAGAGCCTGTGCAGCGCA  782
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGGACAAGTGGAGCCCGTCCAGAATGGCCAGAGCCTGTGCAGCGCA  797

seq1  GGTGGCAAATGTTCAGCATCTCTGTCCAAACAGCAGAGATGCTGAGAATG  832
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCAAATGTTCAGCATCTCTGTCCAAACAGCAGAGATGCTGAGAATG  847

seq1  GCATCAGAACGAGAACTATAGATGTTCTGCTGTTTAAGAAGTCGGCCGCT  882
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCAGAACGAGAACTATAGATGTTCTGCTGTTTAAGAAGTCGGCCGCT  897

seq1  AAACTGCTACAGCAGTGTGCGTAGGAGACCATCAAAGAAAAGAACCATGG  932
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGCTACAGCAGTGTGCGTAGGAGACCATCAAAGAAAAGAACCATGG  947

seq1  AAGACAGAGCCCAACCCTGACAAGGCTCCTGGTAACTCTGCTGCCTCAGA  982
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGAGCCCAACCCTGACAAGGCTCCTGGTAACTCTGCTGCCTCAGA  997

seq1  ATAAATAAAATGGGGCAAGAGCTCTAGAAATGAAATCTGGAAATCCCTCA  1032
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAAATGGGGCAAGAGCTCTAGAAATGAAATCTGGAAATCCCTCA  1047

seq1  CACAGGGCAGGAATAGACAGGCAGCTACAAAATATGAACAAGAACAAGAA  1082
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGGCAGGAATAGACAGGCAGCTACAAAATATGAACAAGAACAAGAA  1097

seq1  GCACTAGTTTCTTGGGATGAATACATGAATATCCCAAGTCCTATGAATTC  1132
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTAGTTTCTTGGGATGAATACATGAATATCCCAAGTCCTATGAATTC  1147