BAC Information

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BAC

Clone NameB6Ng01-229N16
Chromosome19 (Build37)
Map Location 37,688,499 - 37,688,961
singlet/doubletsinglet
Overlap geneExoc6
Upstream geneHectd2, LOC668215, Ppp1r3c, Tnks2, Fgfbp3, Btaf1, Cpeb3, March5, LOC668230, Ide, LOC100043010, Kif11, EG667490, LOC631069, Hhex
Downstream geneCyp26c1, Cyp26a1, LOC668248, LOC668251, LOC209281, Fer1l3, Cep55, Gpr120, Rbp4, Pde6c, 5730455O13Rik, Lgi1, Tmem20, LOC100042483, Plce1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-229N16.bB6Ng01-229N16.g
ACCGA042873GA042874
length1,195457
definitionB6Ng01-229N16.b B6Ng01-229N16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaaccaatctacagcaaacca
gtagccaacatcaaagtatatggtgagaagctggaagcaatcccactaaa
accagggactagacaaggctgcccactttctccatacctattcaacatag
tatttgaagtcctagccagagcaattagacaacaaaaggagatcaagggg
atacaaattggaaaggaagaagtcaaagtatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaaacc
tgataaagagcttcaatgaactagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaaggataaacaagctgagaaagaaattag
gggaacaacacccttcacaatagtcataaataatataaaataccttggcg
tgactctaactaaggaagtgaaaaagctgtatgataagaacttcaagtct
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggattaatatagtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattagaaagagcaatctgcaaattcatctggaataacaaaaaacc
taggatagcaaaaactcttctcaaggataaaagaacctctggtggaatcg
ccatgcctgacctaaagctgtactacagagcaattgagattaaaaactgc
atggtactggtatagcgacagacaagtagaccaatggaatagaattgaag
acccagaaatgaacccacacacctatggtcacttgatcttcgacaaggga
gctaaaaccatccagtgaagaaagacagcattttcaacaaatggttgctg
gcacaactgggttgttatcatgtagaagaatgcgaatcgatccataccta
tctcctgtactaaggtcaatctagtggatcagaaacttcacataaggctg
gcgagatggcctcatggttaagagcacctgactgctcttctagtctggag
ttggtccagccaacacattgtgctccacacatccataacaaatctgatgc
tcttctgagttctgaagtacgttacagggggttaccttcctaata
cccaaggcagtggctacccacctcagtcaagggtttataaaggcaaagaa
caaaagttacaatttgttctcctgaaagctgaaggtcctctcatgcaaaa
caagcttttgtttccagaagcagaaacagcagtgaaaaagtaactcctga
cagcccttaacttttggaagtctaatttccctttatagtcctcgtaagtg
aagagatttaaacttccaattgtaaagttagccatcgcagtccctctgag
tcagattcttgactctgtggtgggtacctgttcacattgggacctaatca
gcatcagcttaatagctcctagtggtgagcttatgtatctggttacagca
tttataatgcagggggcaacgggccctgtgtgtgacagctgacagaatta
ctagtcaggaagagcccgagaatgagaatgggaaccactggaggtggggt
ggggttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_37688499_37688961
seq2: B6Ng01-229N16.g_69_531

seq1  GAATTCCCCAAGGCAGTGGCTACCCACCTCAGTCAAGGGTTTATAAAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCAAGGCAGTGGCTACCCACCTCAGTCAAGGGTTTATAAAGGC  50

seq1  AAAGAACAAAAGTTACAATTTGTTCTCCTGAAAGCTGAAGGTCCTCTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAACAAAAGTTACAATTTGTTCTCCTGAAAGCTGAAGGTCCTCTCAT  100

seq1  GCAAAACAAGCTTTTGTTTCCAGAAGCAGAAACAGCAGTGAAAAAGTAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAACAAGCTTTTGTTTCCAGAAGCAGAAACAGCAGTGAAAAAGTAAC  150

seq1  TCCTGACAGCCCTTAACTTTTGGAAGTCTAATTTCCCTTTATAGTCCTCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGACAGCCCTTAACTTTTGGAAGTCTAATTTCCCTTTATAGTCCTCG  200

seq1  TAAGTGAAGAGATTTAAACTTCCAATTGTAAAGTTAGCCATCGCAGTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGAAGAGATTTAAACTTCCAATTGTAAAGTTAGCCATCGCAGTCCC  250

seq1  TCTGAGTCAGATTCTTGACTCTGTGGTGGGTACCTGTTCACATTGGGACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTCAGATTCTTGACTCTGTGGTGGGTACCTGTTCACATTGGGACC  300

seq1  TAATCAGCATCAGCTTAATAGCTCCTAGTGGTGAGCTTATGTATCTGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAGCATCAGCTTAATAGCTCCTAGTGGTGAGCTTATGTATCTGGTT  350

seq1  ACAGCATTTATAATGCAGGGGGCAACGGGCCCTGTGTGTGACAGCTGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCATTTATAATGCAGGGGGCAACGGGCCCTGTGTGTGACAGCTGACA  400

seq1  GAATTACTAGTCAGGAAGAGCCCGAGAATGAGAATGGGAACCACTGGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTACTAGTCAGGAAGAGCCCGAGAATGAGAATGGGAACCACTGGAGG  450

seq1  TGGGGTGGGGTTG  463
      |||||||||||||
seq2  TGGGGTGGGGTTG  463