BAC Information

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BAC

Clone NameB6Ng01-231I20
Chromosome19 (Build37)
Map Location 33,974,672 - 33,975,270
singlet/doubletsinglet
Overlap genenone
Upstream gene6530404N21Rik, LOC638381, EG668095, LOC628236, AI747699, EG668106, EG668112, EG668114, EG329055, EG433241, LOC668127
Downstream geneLipf, Lipk, EG383462, Lipn, Ankrd22, Stambpl1, Acta2, Fas, Ch25h, Lipa, Ifit2, Ifit3, OTTMUSG00000016644, LOC667370, 2010002M12Rik, Ifit1, Slc16a12, LOC676714, Pank1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-231I20.bB6Ng01-231I20.g
ACCGA044122GA044123
length5991,241
definitionB6Ng01-231I20.b B6Ng01-231I20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatggcagaagaatgagttcagaaatgttgataatatcagggcg
aggaatgaaacattgcaactgtttatctcttcagttaaatagactctatg
tggaaactttcttgttagtcacctattataaggacccttgtggctctaga
atgcagaaatccaatgctgaaaatctgaatgacacctggcttacattgaa
tgccataatatcaaggctaaacaaaaactacttcataaattaagctttct
ggacatggtatgagtttacaagatgagaaaggcctggaacatagactctg
tagaaagccttagtcaccattgaataaatccacgctatttctggtaataa
cacttacctcgtgtatccttacagaaccccagattacaaggatcatgttc
acagtcataattttatcattgttttagttatttgttaaataatctacaca
tgaatctttacatctcaaggcatttgtatatgtatattttatttttatag
ttttatacttttaaattctactagaaaagaatgtaattctctctctgcct
ctctctctctctctctctctctctctctctctctctctctctctctctc
gaattctctattgaatggctaggaagcacctaaagaaatattcaacatcc
ttattcatcaggaaaattcaaatcaatacaactctgagattccacctcac
tctagtcagtatggctaagataaaaaactgaggttagagaagatgctagt
gtggatgtggaaagagaaacacttttctattgttggtgggattgcaagct
tgtagcaccactctagatatcagtccggcagttcctatgaatattagacc
tgaggactagattctcctgagcagatacccaaaagatgctacaacatata
tcaagtactctttctccactatgttcattgcagccttatttatagtatcc
agaagctggaatgaacccagatgtccttcaacagaggaatgaatacaaaa
aatttggttcatttgaacaaaggagtactactcagcttttaaaaacaatg
actttatgaaattctgaggcaaatgggtggaactagaaaatatcatcctg
agtgaggtaaacccagtctcaaaagaacacacatggtatatgcacttact
ggtaagtggatattagctcaaaatctcagaatacccaagatacaattcac
agatccatgaagctcaagaagaagaaagatcaaagtgtggatgcttcagg
cctcagaagggggaataaaatacgggaggtaatatgaagacaaagtatgg
atcagagaccaaagtgtggatcagagactgccccacctggggatccatcc
catatacagtcaccaattctagatactatttgtggataccaataatttgt
ttgatgactggagccctgatatagctgtctcctgagaagctgtgacagag
cctgacaaatatagaggtgggatgatcacaacctactcactgtactgagc
acacagggtccactatgggaggagttagagaaaggactgagagtttgaag
ggcctatgccagcccgataggaatttacatgataaaaaccaaccagacat
ttcagaagcttcccagcgtactaaaccaccaaccaaaagattacacatgg
agggacccatgttctccgagctacataatggtgagcagaaagaaatttta
ttggcacctccatgggcaggggttatgcccatttggtccatgatgacttg
aatgcctcaactgtacaatcccatgcagggcagttaagcatcggatgggg
aatggcatgcatcacgcgaggcgtcctttacgcatgcaacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_33974672_33975270
seq2: B6Ng01-231I20.b_47_645 (reverse)

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  50

seq1  GGCAGAGAGAGAATTACATTCTTTTCTAGTAGAATTTAAAAGTATAAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGAGAGAATTACATTCTTTTCTAGTAGAATTTAAAAGTATAAAAC  100

seq1  TATAAAAATAAAATATACATATACAAATGCCTTGAGATGTAAAGATTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAATAAAATATACATATACAAATGCCTTGAGATGTAAAGATTCAT  150

seq1  GTGTAGATTATTTAACAAATAACTAAAACAATGATAAAATTATGACTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGATTATTTAACAAATAACTAAAACAATGATAAAATTATGACTGTG  200

seq1  AACATGATCCTTGTAATCTGGGGTTCTGTAAGGATACACGAGGTAAGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGATCCTTGTAATCTGGGGTTCTGTAAGGATACACGAGGTAAGTGT  250

seq1  TATTACCAGAAATAGCGTGGATTTATTCAATGGTGACTAAGGCTTTCTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACCAGAAATAGCGTGGATTTATTCAATGGTGACTAAGGCTTTCTAC  300

seq1  AGAGTCTATGTTCCAGGCCTTTCTCATCTTGTAAACTCATACCATGTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCTATGTTCCAGGCCTTTCTCATCTTGTAAACTCATACCATGTCCA  350

seq1  GAAAGCTTAATTTATGAAGTAGTTTTTGTTTAGCCTTGATATTATGGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCTTAATTTATGAAGTAGTTTTTGTTTAGCCTTGATATTATGGCAT  400

seq1  TCAATGTAAGCCAGGTGTCATTCAGATTTTCAGCATTGGATTTCTGCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGTAAGCCAGGTGTCATTCAGATTTTCAGCATTGGATTTCTGCATT  450

seq1  CTAGAGCCACAAGGGTCCTTATAATAGGTGACTAACAAGAAAGTTTCCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGCCACAAGGGTCCTTATAATAGGTGACTAACAAGAAAGTTTCCAC  500

seq1  ATAGAGTCTATTTAACTGAAGAGATAAACAGTTGCAATGTTTCATTCCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGTCTATTTAACTGAAGAGATAAACAGTTGCAATGTTTCATTCCTC  550

seq1  GCCCTGATATTATCAACATTTCTGAACTCATTCTTCTGCCATGGAATTC  599
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGATATTATCAACATTTCTGAACTCATTCTTCTGCCATGGAATTC  599