BAC Information

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BAC

Clone NameB6Ng01-232E21
Chromosome19 (Build37)
Map Location 12,806,856 - 12,975,327
singlet/doubletdoublet
Overlap geneZfp91, Cntf, Lpxn, EG383436, Olfr1444, Olfr1445, Olfr1446
Upstream geneGif, EG666958, Mrpl16, Stx3, Olfr1417, Olfr1418, Olfr1419, EG622845, EG666985, Olfr1420, AV312086, Osbp, GA_x5J8B7W6KF8-6942124-6941700, Olfr1422-ps1, Olfr1423, Olfr1424, Olfr1425, Olfr1426, Olfr1427, Olfr1428, Olfr76, Olfr1555-ps1, Olfr1430-ps1, Olfr1431, Olfr1429-ps1, Olfr262, Olfr232, Olfr1433, Olfr1435-ps1, Olfr1436, Olfr1437, Olfr1438-ps1, Olfr1439-ps1, Olfr1440, Olfr1441, Pfpl, Mpeg1, Dtx4, EG625046, 4632417K18Rik, EG240549, Glyat, Olfr1442, Olfr1443, Keg1
Downstream geneOlfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451, Olfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1, Olfr1457, EG667271, Olfr1459, Olfr1460-ps1, Olfr1461, Olfr1462, Olfr1463, LOC667300, Olfr1465, Olfr1466, Olfr1467, Olfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472, Olfr1473-ps1, Olfr1474, Olfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655, Olfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653, Olfr1487, GA_x5J8B7W6KF8-5425983-5425664, Olfr1489, Olfr1490, Olfr1491, Olfr1492-ps1, Olfr1493-ps1, Olfr1494, Olfr1495, Olfr1496, Olfr1497, Olfr1498-ps1, Olfr1499, Olfr1500, Olfr1501, Olfr1502, Olfr1503-ps1, Olfr1504
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232E21.bB6Ng01-232E21.g
ACCGA044675GA044676
length1,0911,123
definitionB6Ng01-232E21.b B6Ng01-232E21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,806,856 - 12,807,557)(12,974,106 - 12,975,327)
sequence
gaattcttggaatatcctgactgagaacgatgtctttatttacctgagaa
gttgatccacacctgtggggaactcttgattccgccttctaggaatttgg
aaggaatttgacattgggctaggacaaggaagtaggctcaaggtgaataa
ggttgaggaatgtgttctttctatcttgatgggtcttgttaagaccctaa
atacagtaatcaagggatctttgtttatgctttctgtgttctttaactac
ttggtttatgccttaggactgattatcttctttgtatgtacctagaatga
tataaaagcagacaaaaaacaaaagcctcttcagcttcagaactggctgg
ggtcctgttatagtgttgtctaattgtctttttcttttgaatcctccctc
cctccctccctgtcgaatctattgacttactgagttatcttggtcacaca
tcagataatttatgctaacaatgtgatttacaatggttgaaccctgtttt
ctatcgcagaagaccctgagctatcctagattactttgacctgtagggtg
gagctgaaattggtgactggagattagtcacctaaatctctatgaatgac
tccagtaaaaagtctagatgcctagtttcaggtaagattctctgcccaac
tacattgcccgtgtgttgtcacacagtcacagtaggagaatgaagcacgg
actgtgtgttctcccagggagaacagagctggcttcttacctgcattttg
ctgattttaatagtctgtgtccttacactgtagtcacgatgattaagcca
gcagcgctgagctctgtggatcctcaaaggtaactgtcaaacttaaaatt
gttgctgggaattcctgacataatattccttttaattctgtttcagctct
acacctatttttgaatgtgggctttgggagttgtgtctcatttcactagg
atgagcgtgcaaattacagctttgggtggtggtttctttcagttgaatgt
tctatcaactaggtaatctttgttcttattctcaataagttatattgtgc
ttgcctagctcaacatacaacaacttaaacttacttatttg
gaattcatttcctaaaaggaaaaaaatgggtttaatttaattttgtatga
tgatgtttataattttattcttctcagatctcctccctgtactaaattag
tgttgaagtccacaataagttcaagtagataaaatgatatccttacttct
ttcaaaattcttggaaaatattttatacagaattgtatacttggatgata
acaatagtttacagttttcaaaatcccattaagattacttatctatcact
taactacatgtatttttcctattacatatcaattcaaatacacacaaagc
aatttcaaataaataccatgaacagagaaatgcatgaaggtgttcataat
atgtgtgtgagtatggtgaattttatagaaaggtgtgtttaaagtggata
tttatagtgcttaattttatgtgttcacttcactacattactggtatgtc
ttcgacaatatttccaagaattcatgtgtctagaatgagaagcagttaaa
ttagaaactaagacagtctattatcatctctgtgggtgaatgtgatccta
attcttagaccttagagaaatacaaccctcctctctgtctttcttgctcc
caatcttttcctctccatcttcctctaccccctcctcttcctttatgttt
cttgctccctcttcttctctatcctttcccctcctctcgctttgccctga
gtattcatctcctctcactctcagatgtcaaaattgatgatctggtcctc
actctttttttaacagcaccttttattagttttagtcaaagtttaatttc
tgtaggatgagagaaaaaacagccatacaatccttaaaatccatttctga
gaagaggacagtttggcaatagtcagtttcctgatgctttagactttgat
cttcaagttcttaatcgattgcattaatcacagccttctctttcttctca
agcttaaagtcaggatatcgtgattacttccaaccttcatatcacatgac
caatgccccacataaataccttctaatttgtccaggtataatatatctat
tgattctgttttctctaggagaaacttcttagagccgattaaagcatatt
ggtaatgtgtaaaggcttttgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_12806856_12807557
seq2: B6Ng01-232E21.b_422_1136

seq1  TCTTTTTCTTTTGAATCCTCCCTCCCTCCCTCCCTGTCGAATCTATTGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTCTTTTGAATCCTCCCTCCCTCCCTCCCTGTCGAATCTATTGAC  50

seq1  TTACTGAGTTATCTTGGTCACACATCAGATAATTTATGCTAACAATGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGAGTTATCTTGGTCACACATCAGATAATTTATGCTAACAATGTGA  100

seq1  TTTACAATGGTTGAACCCTGTTTTCTATCGCAGAAGACCCTGAGCTATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAATGGTTGAACCCTGTTTTCTATCGCAGAAGACCCTGAGCTATCC  150

seq1  TAGATTACTTTGACCTGTAGGGTGGAGCTGAAATTGGTGACTGGAGATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTACTTTGACCTGTAGGGTGGAGCTGAAATTGGTGACTGGAGATTA  200

seq1  GTCACCTAAATCTCTATGAATGACTCCAGTAAAAAGTCTAGATGCCTAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCTAAATCTCTATGAATGACTCCAGTAAAAAGTCTAGATGCCTAGT  250

seq1  TTCAGGTAAGATTCTCTGCCCAACTACATTGCCCGTGTGTTGTCACACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGTAAGATTCTCTGCCCAACTACATTGCCCGTGTGTTGTCACACAG  300

seq1  TCACAGTAGGAGAATGAAGCACGGACTGTGTGTTCTCCCAGGGAGAACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGTAGGAGAATGAAGCACGGACTGTGTGTTCTCCCAGGGAGAACAG  350

seq1  AGCTGGCTTCTTACCTGCATTTTGCTGATTTTAATAGTCTGTGTCCTTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGCTTCTTACCTGCATTTTGCTGATTTTAATAGTCTGTGTCCTTAC  400

seq1  ACTGTAGTCACGATGATTAAGCCAGCAGCGCTGAGCTCTGTGGATCCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAGTCACGATGATTAAGCCAGCAGCGCTGAGCTCTGTGGATCCTCA  450

seq1  AAGGTAACTGTCAAACTTAAAATTGTTGCTGGGAATTCCTGACATAATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAACTGTCAAACTTAAAATTGTTGCTGGGAATTCCTGACATAATAT  500

seq1  TCCTTTTAATTCTG-TTCAGCTCTACACCTATTTTTGAATGTGGGCTTT-  548
      |||||||||||||| |||||||||||||||||||||||||||||||||| 
seq2  TCCTTTTAATTCTGTTTCAGCTCTACACCTATTTTTGAATGTGGGCTTTG  550

seq1  GGAGTTGTG-CCCA-TTCACTA-GATGAGCGTGCAAAATACAGCTTTGGG  595
      ||||||||| | || ||||||| |||||||||||||| ||||||||||||
seq2  GGAGTTGTGTCTCATTTCACTAGGATGAGCGTGCAAATTACAGCTTTGGG  600

seq1  TGGTGGTT--CTTCAGTTGAATGGTCTATTCACTAGGTATTC-TTGTTCT  642
      ||||||||   |||||||||||| |||||  |||||||| || |||||||
seq2  TGGTGGTTTCTTTCAGTTGAATGTTCTATCAACTAGGTAATCTTTGTTCT  650

seq1  TATTCTCA--TAGTT-TAATGTGCTTG-CTAGCTC-ACATACAACCACTT  687
      ||||||||   |||| || |||||||| ||||||| ||||||||| ||||
seq2  TATTCTCAATAAGTTATATTGTGCTTGCCTAGCTCAACATACAACAACTT  700

seq1  AAACTTACTTATTTG  702
      |||||||||||||||
seq2  AAACTTACTTATTTG  715

seq1: chr19_12974106_12975327
seq2: B6Ng01-232E21.g_67_1189 (reverse)

seq1  CTCAAAAGCCTGTATCTCTCCTAGCAAGGCTCTACTATCTAAAACTCTTC  50
                                                        
seq2  --------------------------------------------------  0

seq1  AAGCAGCACCCCATCTGGTGACCAAATGTTCAAATAGGTGAGCATATAGG  100
                                                        
seq2  --------------------------------------------------  0

seq1  AGACATTTCTCATCAAAGCAT---CACATTTACCAA-ATGCTTTAATC-G  145
              ||||  ||||| |   |||| ||||||| ||||||||||| |
seq2  --------CTCA--AAAGCCTTTACACA-TTACCAATATGCTTTAATCGG  39

seq1  TTTTTAGA--GTTCTCCT-GAG-AAACAGCATCAATAGGATATAATATAC  191
       | | |||   ||||||| ||| |||||| ||||||| |||||| |||||
seq2  CTCTAAGAAGTTTCTCCTAGAGAAAACAGAATCAATA-GATATATTATAC  88

seq1  CTGGACAAA-TAGAAGGTATTTATTGTGGGCATTGGTTCATGTGATATGA  240
      ||||||||| ||||||||||||||   ||||||||| |||||||||||||
seq2  CTGGACAAATTAGAAGGTATTTATGTGGGGCATTGG-TCATGTGATATGA  137

seq1  AGGTTGGGAAGT-ATCACGATATCCTGACTTTAAGCTTGAGAAG-AAGAG  288
      ||||| |||||| ||||||||||||||||||||||||||||||| |||||
seq2  AGGTT-GGAAGTAATCACGATATCCTGACTTTAAGCTTGAGAAGAAAGAG  186

seq1  AAGCTGGTGATTAATGCAATCGATTTAG-ACTTGAAGATCAAAGTCTAAA  337
      |||   ||||||||||||||||||| || |||||||||||||||||||||
seq2  AAGGCTGTGATTAATGCAATCGATTAAGAACTTGAAGATCAAAGTCTAAA  236

seq1  GCATCAGGAAACTGGCTTATTGCCAAACTGTCCTCTTCTCAG-AATGGAT  386
      |||||||||||||| | ||||||||||||||||||||||||| |||||||
seq2  GCATCAGGAAACTGAC-TATTGCCAAACTGTCCTCTTCTCAGAAATGGAT  285

seq1  TTTAAGGATTGTATGGCTGTTTTTTCTCTCATCCTACAGAAATTAAACTT  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGGATTGTATGGCTGTTTTTTCTCTCATCCTACAGAAATTAAACTT  335

seq1  TGACT-AAACTAAT-AAAGGTGCTGTTAAAAAAAGAGTGAGGACCAGATC  484
      ||||| |||||||| |||||||||||||||||||||||||||||||||||
seq2  TGACTAAAACTAATAAAAGGTGCTGTTAAAAAAAGAGTGAGGACCAGATC  385

seq1  ATCAATTTTGACATCTGAGAGTGAGAGGAGATGAATACTCAGGGCAAAGC  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATTTTGACATCTGAGAGTGAGAGGAGATGAATACTCAGGGCAAAGC  435

seq1  GAGAGGAGGGGAAAGGATAGAGAAGAAGAGGGAGCAAGAAACATAAAGGA  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGAGGGGAAAGGATAGAGAAGAAGAGGGAGCAAGAAACATAAAGGA  485

seq1  AGAGGAGGGGGTAGAGGAAGATGGAGAGGAAAAGATTGGGAGCAAGAAAG  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAGGGGGTAGAGGAAGATGGAGAGGAAAAGATTGGGAGCAAGAAAG  535

seq1  ACAGAGAGGAGGGTTGTATTTCTCTAAGGTCTAAGAATTAGGATCACATT  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAGGAGGGTTGTATTTCTCTAAGGTCTAAGAATTAGGATCACATT  585

seq1  CACCCACAGAGATGATAATAGACTGTCTTAGTTTCTAATTTAACTGCTTC  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCACAGAGATGATAATAGACTGTCTTAGTTTCTAATTTAACTGCTTC  635

seq1  TCATTCTAGACACATGAATTCTTGGAAATATTGTCGAAGACATACCAGTA  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCTAGACACATGAATTCTTGGAAATATTGTCGAAGACATACCAGTA  685

seq1  ATGTAGTGAAGTGAACACATAAAATTAAGCACTATAAATATCCACTTTAA  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGTGAAGTGAACACATAAAATTAAGCACTATAAATATCCACTTTAA  735

seq1  ACACACCTTTCTATAAAATTCACCATACTCACACACATATTATGAACACC  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACCTTTCTATAAAATTCACCATACTCACACACATATTATGAACACC  785

seq1  TTCATGCATTTCTCTGTTCATGGTATTTATTTGAAATTGCTTTGTGTGTA  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGCATTTCTCTGTTCATGGTATTTATTTGAAATTGCTTTGTGTGTA  835

seq1  TTTGAATTGATATGTAATAGGAAAAATACATGTAGTTAAGTGATAGATAA  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATTGATATGTAATAGGAAAAATACATGTAGTTAAGTGATAGATAA  885

seq1  GTAATCTTAATGGGATTTTGAAAACTGTAAACTATTGTTATCATCCAAGT  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATCTTAATGGGATTTTGAAAACTGTAAACTATTGTTATCATCCAAGT  935

seq1  ATACAATTCTGTATAAAATATTTTCCAAGAATTTTGAAAGAAGTAAGGAT  1084
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAATTCTGTATAAAATATTTTCCAAGAATTTTGAAAGAAGTAAGGAT  985

seq1  ATCATTTTATCTACTTGAACTTATTGTGGACTTCAACACTAATTTAGTAC  1134
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTTATCTACTTGAACTTATTGTGGACTTCAACACTAATTTAGTAC  1035

seq1  AGGGAGGAGATCTGAGAAGAATAAAATTATAAACATCATCATACAAAATT  1184
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGGAGATCTGAGAAGAATAAAATTATAAACATCATCATACAAAATT  1085

seq1  AAATTAAACCCATTTTTTTCCTTTTAGGAAATGAATTC  1222
      ||||||||||||||||||||||||||||||||||||||
seq2  AAATTAAACCCATTTTTTTCCTTTTAGGAAATGAATTC  1123