BAC Information

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BAC

Clone NameB6Ng01-233H22
Chromosome19 (Build37)
Map Location 52,536,760 - 52,537,873
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042924, LOC100042928, LOC668536, LOC100042936, Ins1
Downstream geneLOC100043450, Xpnpep1, LOC668545, LOC674277, Add3, 1700001K23Rik, Mxi1, Smndc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-233H22.bB6Ng01-233H22.g
ACCGA045536GA045537
length1,1111,044
definitionB6Ng01-233H22.b B6Ng01-233H22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctattacatgcatggtattgttaagtggttattataattattta
gaagacatactctcacctttaccagaagcggccagtgagtatctaatgag
aggggcttgagctaccactagactagaatttaccaagtgcatccagagga
tgggggaagcagtcactcttcacaggagggctatgaccagaatggctctc
tcatataactttgttgaagggctatgagttgctaaaggtcttgaaaataa
tgaacctcagagtttggtattgaggtaagtccttgttctaaggtatcttg
cccctctggggataagggatcaggttctttctaattcactgtgttgagct
tctccatgggaacatcattgtattagttgtttttaaattcagaacatgat
atttattattcttaatttcaaaccaattttcttttgacacccccatctgt
ttattttagagtttccataattgaaatggtattaaaatataaaatataat
tgaaacaaagataccgaaattaggtctggatttcaggtattgtaagttca
tgtacataatgtccgatatggttccctggaatcggatctctgtaacttga
ttttgtttggtcatttatctcctttttcctccctagtcccatcttccatt
tcaaaaaaacagctaaactgctgtaaggtgaacctattcaaagctatgtc
acaaagccaataataataataataataataataataataataataataat
aataataataataataaaagttattattattattatcttcaagatgtttt
acctggtggacccagggtgtttttacatataagtatgatagggctcacac
ttgctgcttaataacttctgtgcttttacatacagatgttatgtgctatg
gattaccctcctctaacccacagcagactagttgggaagtggaggcctga
aggcctgttctgaaattctttttaggactaaagagtagtgttatactgac
tttctcttttcaggagcatttatcctcagaggctttcttctacaggccca
cagatctaaactccaaatgctgagcagaaaagtgaaaatcagggaaatta
tatggaataga
gaattctcatattggttccctgaactgtagagtgagggctattatggttg
gaaaggccaaatggaagcctttagagttgcctttgccaaagaaaatagtg
aatcaaaaacagtatcgtattcctggaggcattgcagaaattactgccac
tatcaaggacttgaaagacgcaggggtggtggttcccaccacatctccgt
ttaactctcctatctggccagtgcagaaaacagatggatcatggagaatg
acagttgattatcgaaaactaaatcaggtagtaactccaattgcagctgc
tgtaccagacgtagtttcgttacttgagcaaattaacacatctcctggca
cctggtatgcggctattgatctggcaaatgccttcttctcagtacctgtc
cataaggaccaccagaagcaatttgctttcagttggcaaggccaacagta
taccttcacagttttgcctcaaggatatattaactctcctgccctgtgtc
ataatttagttagaagggatcttgatcgtttggatcttccacaaaatatc
acattggtgcactatattgacgacattatgctgattggaccaagtgagca
ggaagtagcaaccactttggactcattggtaacacatatgcgtatcagag
gatgggaaataaatccaaccaaaattcaaggaccatctacctcagtgaaa
ttcttaggagtccagtggtgtggagcatgcagagatattccttctaaggt
gaaagataagtttattgcacctggcccctcctacaaccaagaaagaagca
caacgttttagtgggccctatttggattctggagacaacacatccctcac
ttgggtgtgttacttaggccttatttaccaagtgactcggataagctgct
agctttgtgtggggcctggaacaggaaaaggcccttcaacagtccaggct
gctgtgcaggctgcttctaccacttggaacatatgacccagcagacccga
tggtacttgaggtgtcctgttggctgatagagatgcctgttttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_52536760_52537873
seq2: B6Ng01-233H22.b_50_1160 (reverse)

seq1  TCTATTTCATATAATTTCCTTGATTTTTCACTTTTCTGCTCAGCATTTGA  50
      |||||| |||||||||||| ||| ||||||||||||||||||||||||| 
seq2  TCTATTCCATATAATTTCCCTGA-TTTTCACTTTTCTGCTCAGCATTTGG  49

seq1  GTTTTAGATCTGTGG--CTGTAGAAGAAAGCCCTCTGAAGATAAATGCTC  98
        |||||||||||||  ||||||||||||| ||||||| |||||||||||
seq2  AGTTTAGATCTGTGGGCCTGTAGAAGAAAG-CCTCTGAGGATAAATGCTC  98

seq1  CTGAAAAGGAGAAAGTCAGTATTAACACTTACTCTTTAGTCCTTAAAAAG  148
      ||||||| ||||||||||||| |||||| ||||||||||||| |||||||
seq2  CTGAAAA-GAGAAAGTCAGTA-TAACAC-TACTCTTTAGTCC-TAAAAAG  144

seq1  AATTTCAGAACAGGCCTTCAGGCCTCCACTT-CCAACTAGTCTGCTGTGG  197
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AATTTCAGAACAGGCCTTCAGGCCTCCACTTCCCAACTAGTCTGCTGTGG  194

seq1  GTTAGAGGAGGGTAATCCATAGCACATAACATCTGTATGTAAAAGCACAG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGAGGAGGGTAATCCATAGCACATAACATCTGTATGTAAAAGCACAG  244

seq1  AAGTTATTAAGCAGCAAGTGTGAGCCCTATCATACTTATATGTAAAAACA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTATTAAGCAGCAAGTGTGAGCCCTATCATACTTATATGTAAAAACA  294

seq1  CCCTGGGTCCACCAGGTAAAACATCTTGAAGATAATAATAATAATAACTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGGTCCACCAGGTAAAACATCTTGAAGATAATAATAATAATAACTT  344

seq1  TTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATT  394

seq1  ATTATTATTGGCTTTGTGACATAGCTTTGAATAGGTTCACCTTACAGCAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTATTGGCTTTGTGACATAGCTTTGAATAGGTTCACCTTACAGCAG  444

seq1  TTTAGCTGTTTTTTTGAAATGGAAGATGGGACTAGGGAGGAAAAAGGAGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCTGTTTTTTTGAAATGGAAGATGGGACTAGGGAGGAAAAAGGAGA  494

seq1  TAAATGACCAAACAAAATCAAGTTACAGAGATCCGATTCCAGGGAACCAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGACCAAACAAAATCAAGTTACAGAGATCCGATTCCAGGGAACCAT  544

seq1  ATCGGACATTATGTACATGAACTTACAATACCTGAAATCCAGACCTAATT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGGACATTATGTACATGAACTTACAATACCTGAAATCCAGACCTAATT  594

seq1  TCGGTATCTTTGTTTCAATTATATTTTATATTTTAATACCATTTCAATTA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGTATCTTTGTTTCAATTATATTTTATATTTTAATACCATTTCAATTA  644

seq1  TGGAAACTCTAAAATAAACAGATGGGGGTGTCAAAAGAAAATTGGTTTGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAACTCTAAAATAAACAGATGGGGGTGTCAAAAGAAAATTGGTTTGA  694

seq1  AATTAAGAATAATAAATATCATGTTCTGAATTTAAAAACAACTAATACAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGAATAATAAATATCATGTTCTGAATTTAAAAACAACTAATACAA  744

seq1  TGATGTTCCCATGGAGAAGCTCAACACAGTGAATTAGAAAGAACCTGATC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTTCCCATGGAGAAGCTCAACACAGTGAATTAGAAAGAACCTGATC  794

seq1  CCTTATCCCCAGAGGGGCAAGATACCTTAGAACAAGGACTTACCTCAATA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATCCCCAGAGGGGCAAGATACCTTAGAACAAGGACTTACCTCAATA  844

seq1  CCAAACTCTGAGGTTCATTATTTTCAAGACCTTTAGCAACTCATAGCCCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACTCTGAGGTTCATTATTTTCAAGACCTTTAGCAACTCATAGCCCT  894

seq1  TCAACAAAGTTATATGAGAGAGCCATTCTGGTCATAGCCCTCCTGTGAAG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACAAAGTTATATGAGAGAGCCATTCTGGTCATAGCCCTCCTGTGAAG  944

seq1  AGTGACTGCTTCCCCCATCCTCTGGATGCACTTGGTAAATTCTAGTCTAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACTGCTTCCCCCATCCTCTGGATGCACTTGGTAAATTCTAGTCTAG  994

seq1  TGGTAGCTCAAGCCCCTCTCATTAGATACTCACTGGCCGCTTCTGGTAAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGCTCAAGCCCCTCTCATTAGATACTCACTGGCCGCTTCTGGTAAA  1044

seq1  GGTGAGAGTATGTCTTCTAAATAATTATAATAACCACTTAACAATACCAT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGAGTATGTCTTCTAAATAATTATAATAACCACTTAACAATACCAT  1094

seq1  GCATGTAATAGGAATTC  1114
      |||||||||||||||||
seq2  GCATGTAATAGGAATTC  1111