BAC Information

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BAC

Clone NameB6Ng01-237B24
Chromosome19 (Build37)
Map Location 24,474,346 - 24,475,533
singlet/doubletsinglet
Overlap genePip5k1b
Upstream geneMamdc2, 1700028P14Rik, LOC670565, LOC226030, EG625193, Ptar1, Apba1, Gm967, 1700021P04Rik, Tjp2, Fxn, LOC667743, LOC100042457
Downstream gene2900009I07Rik, E030010A14Rik, Pgm5, LOC672195, Foxd4, Cbwd1, Dock8, LOC100042503, Ankrd15, LOC433233
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-237B24.bB6Ng01-237B24.g
ACCGA048170GA048171
length3141,177
definitionB6Ng01-237B24.b B6Ng01-237B24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tctcctttacaggattttgttgtgcaaaccttgttccttgatttaaaacc
attggttattcgaggccagcctgcctggtctacaaagtgagttccaggac
agccagggctacacagagaaaccctgtcccaaaacaacaacaacaaacaa
acaaacaaacaaacaaaaactcattggttaaataaaattggctgcaggca
attgctggagggattggaggtaggtaggttttgagtgacttggttggggt
tggggaagacagaggagcgaggagagaccaggatccggaaggacaacaaa
gagaggaggaagct

gaattcagcactatcagtacaaaaggtcaccgttgacaactgacaccact
gacaactagtggcatcgcagaatgcagggaaagaatattaaaataacaaa
gttgcttttttttccaggcactagatgcacttgagtctcagccttttgta
tcttgcttcctatgatcttaagtcaaaagatatttaaaaaaaaatcaaga
cactttcctgtgttctgcacggtccaatacttggatagttgttctcaggt
gaaggatgacagatgttcagagcgaagcaagcaaaatgcttaaatgatgg
tttgaggagttgctcttttgtatatacaagcttctgaacggtactggttg
actgtgggaggtcatttcaggcaaattcaacaagagttaatgcgaggttc
accccctgttaaatgtctgtctgggtgctcagtcctgggtgactgaagat
gacagggccttaggaaaagaactagatattggatacagggtagacagatt
ctgaaatagtgccatatgtccatgatggtggaatagcatccaaacagatt
gaaaagacccgagagtcataggtgactgttaccatggtgacaacagcaaa
ggagtctaggtcatgaatcaaacttgtagggaattcttcagttacagaag
ataaactatgagaagccagtggacaagagacagagcaggccctccagaaa
gctggaagtggttctccctcatacaatcaagaaaaacattttaggaagag
atattctttgatattaaaaaaaaagcatgaagaaataaaaataataaagg
aagttggggattagtgttggatttataaactattgcctggggaaaaaaag
aaagtatttccttttgaatatactggataatctttattccattcattttc
gtccgagtttctcaaccatggaaccattgatgtttgggatggctaactct
ctgtggtagagagcttttcagtgcagcacggatgcttagacccacttgat
gctgcagcacccacaacacaccagttatgatacaaacaaaaaactcgcag
acgtacgaatgcctcagctagattcagcaattaacttattggattgcttt
ctgctgtggatgtagttaacatagcctacgaacgtaagacgacatgcaaa
ccctttgaaagaacaagttgtgtgtac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_24474346_24475533
seq2: B6Ng01-237B24.g_64_1240 (reverse)

seq1  GTACAC------TGTTCT---CAAGGGTTTGCATGTTCTGTCTTTTTACG  41
      ||||||      ||||||    |||||||||||     |||| | |||||
seq2  GTACACACAACTTGTTCTTTCAAAGGGTTTGCA-----TGTCGTCTTACG  45

seq1  TCTGGTAGCGCTAATGTAGAACTACAAACCACAGCAGAAAACAAT-CAAT  90
      | | |||| ||| ||||  |||||| | |||||||||||| |||| ||||
seq2  T-TCGTAG-GCT-ATGT-TAACTAC-ATCCACAGCAGAAAGCAATCCAAT  90

seq1  AAGTTAAATGCTGATTCTTAGCTGGAGGCATTTGGTAATGTCTGCGAGGT  140
      ||||||| |||||| || ||||| |||||||| |   | |||||||| ||
seq2  AAGTTAATTGCTGAATC-TAGCT-GAGGCATTCG--TACGTCTGCGA-GT  135

seq1  TTTTTGTTTTTGTTATCATAACTGGTGTGTTGTGGGTGCTGCAAGCATCA  190
      |||||||||    ||||||||||||||||||||||||||||| |||||||
seq2  TTTTTGTTT---GTATCATAACTGGTGTGTTGTGGGTGCTGC-AGCATCA  181

seq1  AGTGGGTCTAAGCATTCCGTGCTGCACTGAAAAGCTCTCTACCACAGAGA  240
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AGTGGGTCTAAGCA-TCCGTGCTGCACTGAAAAGCTCTCTACCACAGAGA  230

seq1  GTTAGCCATCCCCAAACATCAATGGTTCCATGGTTGAGAAACTCGGACGA  290
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGCCAT-CCCAAACATCAATGGTTCCATGGTTGAGAAACTCGGACGA  279

seq1  AAATGAATGGAATAAAGATTATCCAGTATATTCAAAAGGAAATACTTTCT  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAATGGAATAAAGATTATCCAGTATATTCAAAAGGAAATACTTTCT  329

seq1  TTTTTTCCCCAGGCAATAGTTTATAAATCCAACACTAATCCCCAACTTCC  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCCCCAGGCAATAGTTTATAAATCCAACACTAATCCCCAACTTCC  379

seq1  TTTATTATTTTTATTTCTTCATGCTTTTTTTTTAATATCAAAGAATATCT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTATTTTTATTTCTTCATGCTTTTTTTTTAATATCAAAGAATATCT  429

seq1  CTTCCTAAAATGTTTTTCTTGATTGTATGAGGGAGAACCACTTCCAGCTT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTAAAATGTTTTTCTTGATTGTATGAGGGAGAACCACTTCCAGCTT  479

seq1  TCTGGAGGGCCTGCTCTGTCTCTTGTCCACTGGCTTCTCATAGTTTATCT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGGGCCTGCTCTGTCTCTTGTCCACTGGCTTCTCATAGTTTATCT  529

seq1  TCTGTAACTGAAGAATTCCCTACAAGTTTGATTCATGACCTAGACTCCTT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAACTGAAGAATTCCCTACAAGTTTGATTCATGACCTAGACTCCTT  579

seq1  TGCTGTTGTCACCATGGTAACAGTCACCTATGACTCTCGGGTCTTTTCAA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTGTCACCATGGTAACAGTCACCTATGACTCTCGGGTCTTTTCAA  629

seq1  TCTGTTTGGATGCTATTCCACCATCATGGACATATGGCACTATTTCAGAA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTGGATGCTATTCCACCATCATGGACATATGGCACTATTTCAGAA  679

seq1  TCTGTCTACCCTGTATCCAATATCTAGTTCTTTTCCTAAGGCCCTGTCAT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTACCCTGTATCCAATATCTAGTTCTTTTCCTAAGGCCCTGTCAT  729

seq1  CTTCAGTCACCCAGGACTGAGCACCCAGACAGACATTTAACAGGGGGTGA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGTCACCCAGGACTGAGCACCCAGACAGACATTTAACAGGGGGTGA  779

seq1  ACCTCGCATTAACTCTTGTTGAATTTGCCTGAAATGACCTCCCACAGTCA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCGCATTAACTCTTGTTGAATTTGCCTGAAATGACCTCCCACAGTCA  829

seq1  ACCAGTACCGTTCAGAAGCTTGTATATACAAAAGAGCAACTCCTCAAACC  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTACCGTTCAGAAGCTTGTATATACAAAAGAGCAACTCCTCAAACC  879

seq1  ATCATTTAAGCATTTTGCTTGCTTCGCTCTGAACATCTGTCATCCTTCAC  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTAAGCATTTTGCTTGCTTCGCTCTGAACATCTGTCATCCTTCAC  929

seq1  CTGAGAACAACTATCCAAGTATTGGACCGTGCAGAACACAGGAAAGTGTC  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAACAACTATCCAAGTATTGGACCGTGCAGAACACAGGAAAGTGTC  979

seq1  TTGATTTTTTTTTAAATATCTTTTGACTTAAGATCATAGGAAGCAAGATA  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTTTTTTTAAATATCTTTTGACTTAAGATCATAGGAAGCAAGATA  1029

seq1  CAAAAGGCTGAGACTCAAGTGCATCTAGTGCCTGGAAAAAAAAGCAACTT  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGGCTGAGACTCAAGTGCATCTAGTGCCTGGAAAAAAAAGCAACTT  1079

seq1  TGTTATTTTAATATTCTTTCCCTGCATTCTGCGATGCCACTAGTTGTCAG  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATTTTAATATTCTTTCCCTGCATTCTGCGATGCCACTAGTTGTCAG  1129

seq1  TGGTGTCAGTTGTCAACGGTGACCTTTTGTACTGATAGTGCTGAATTC  1188
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTCAGTTGTCAACGGTGACCTTTTGTACTGATAGTGCTGAATTC  1177


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