MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-237L11
Chromosome	19 (Build37)
Map Location	21,236,416 - 21,354,637
singlet/doublet	doublet
Overlap gene	LOC100042294, LOC100041602, LOC100041613, Zfand5
Upstream gene	LOC100041541, Anxa1, LOC100041560, 1500015L24Rik, E030003E18Rik, EG626549, Aldh1a1, Aldh1a7, Tmc1, LOC100042287
Downstream gene	Gda, LOC100041633, 1110059E24Rik, 5730446C15Rik, Tmem2, EG433229, Trpm3
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100041541 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041541
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 Proteins pseudo : _no_value

name	Anxa1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16952 MGI:96819
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041560 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041560
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	1500015L24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68994 MGI:1916244
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	E030003E18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320092 MGI:2443348
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	EG626549 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:626549 MGI:3643522
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	Aldh1a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11668 MGI:1353450
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Aldh1a7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26358 MGI:1347050
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13409 MGI:2151016
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042287 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042287
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs

name	LOC100042294 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042294
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	LOC100041602 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041602
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100041613 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041613
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs

name	Zfand5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22682 MGI:1278334
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gda (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14544 MGI:95678
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041633 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041633
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	1110059E24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66206 MGI:1913456
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	5730446C15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226016 MGI:1917816
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83921 MGI:1890373
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	EG433229 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433229 MGI:3645435
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 493 ESTs, 26 Proteins

name	Trpm3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226025 MGI:2443101
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 9 mRNAs

name	Anxa1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124517662 GeneID:16952 MGI:96819
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : annexin A1 transcript_id : NM_010730.2

name	E030003E18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270435 GeneID:320092 MGI:2443348
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA E030003E18 gene transcript_id : XM_991476.2

name	EG626549 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82998444 GeneID:626549 MGI:3643522
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : predicted gene, EG626549 transcript_id : XM_891145.1

name	Aldh1a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129922 GeneID:11668 MGI:1353450
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aldehyde dehydrogenase family 1, subfamily A1 transcript_id : NM_013467.3

name	Aldh1a7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130002 GeneID:26358 MGI:1347050
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aldehyde dehydrogenase family 1, subfamily A7 transcript_id : NM_011921.2

name	Tmc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119703759 GeneID:13409 MGI:2151016
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane channel-like gene family 1 transcript_id : NM_028953.2

name	LOC100042287 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270436 GeneID:100042287
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs product : hypothetical protein LOC100042287 transcript_id : XM_001477886.1

name	LOC100042294 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270440 GeneID:100042294
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100042294 transcript_id : XM_001477898.1

name	LOC100041613 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270401 GeneID:100041613
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs product : hypothetical protein LOC100041613 transcript_id : XM_001476689.1

name	Zfand5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802980 GeneID:22682 MGI:1278334
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, AN1-type domain 5 transcript_id : NM_009551.3

name	Gda (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87299644 GeneID:14544 MGI:95678
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : guanine deaminase transcript_id : NM_010266.2

name	LOC100041633 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270403 GeneID:100041633
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : similar to C9orf57 protein transcript_id : XM_001476731.1

name	1110059E24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802670 GeneID:66206 MGI:1913456
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1110059E24 gene transcript_id : NM_025423.2

name	5730446C15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:73622268 GeneID:226016 MGI:1917816
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5730446C15 gene transcript_id : NM_146096.3

name	Tmem2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76253925 GeneID:83921 MGI:1890373
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 2 transcript_id : NM_031997.3

name	Tmem2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76253921 GeneID:83921 MGI:1890373
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 2 transcript_id : NM_001033759.1

name	EG433229 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270442 GeneID:433229 MGI:3645435
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 492 ESTs, 26 Proteins product : predicted gene, EG433229, transcript variant 7 transcript_id : XM_899874.3

name	Trpm3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:95147344 GeneID:226025 MGI:2443101
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transient receptor potential cation channel, subfamily M, member 3 transcript_id : NM_001035240.2

name	Trpm3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:95147345 GeneID:226025 MGI:2443101
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transient receptor potential cation channel, subfamily M, member 3 transcript_id : NM_001035241.2

name	Trpm3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:95147343 GeneID:226025 MGI:2443101
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transient receptor potential cation channel, subfamily M, member 3 transcript_id : NM_001035239.2

name	Trpm3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:78214531 GeneID:226025 MGI:2443101
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transient receptor potential cation channel, subfamily M, member 3 transcript_id : NM_001035242.1

name	Trpm3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:95147347 GeneID:226025 MGI:2443101
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transient receptor potential cation channel, subfamily M, member 3 transcript_id : NM_001035243.2

name	Anxa1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124517663 CCDS:CCDS29692.1 GeneID:16952 MGI:96819
definition	GO_component : GO:0042383 - sarcolemma [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005544 - calcium-dependent phospholipid binding [Evidence IEA]; GO:0019834 - phospholipase A2 inhibitor activity [Evidence IEA]; GO:0004859 - phospholipase inhibitor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0050482 - arachidonic acid secretion [Evidence IMP]; GO:0007049 - cell cycle [Evidence IMP]; GO:0042127 - regulation of cell proliferation [Evidence IMP]; GO:0007165 - signal transduction [Evidence IMP] codon_start : 1 note : lipocortin 1 product : annexin A1 protein_id : NP_034860.2

name	E030003E18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94405912 GeneID:320092 MGI:2443348
definition	codon_start : 1 product : hypothetical protein LOC320092 protein_id : XP_996570.1

name	EG626549 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82998445 GeneID:626549 MGI:3643522
definition	codon_start : 1 product : hypothetical protein protein_id : XP_896238.1

name	Aldh1a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85861182 CCDS:CCDS29695.1 GeneID:11668 MGI:1353450
definition	GO_function : GO:0004028 - 3-chloroallyl aldehyde dehydrogenase activity [Evidence IDA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0001758 - retinal dehydrogenase activity [Evidence IEA] GO_process : GO:0048048 - embryonic eye morphogenesis [Evidence IGI]; GO:0008152 - metabolism [Evidence IEA]; GO:0002072 - optic cup morphogenesis (sensu Mammalia) [Evidence IGI]; GO:0043065 - positive regulation of apoptosis [Evidence IGI]; GO:0042573 - retinoic acid metabolism [Evidence IMP] [Evidence IGI] codon_start : 1 note : aldehyde dehydrogenase 1, liver cytosolic (class 1); alcohol dehydrogenase family 1, subfamily A2; alcohol dehydrogenase family 1, subfamily A1 product : aldehyde dehydrogenase family 1, subfamily A1 protein_id : NP_038495.2

name	Aldh1a7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7106242 CCDS:CCDS29696.1 GeneID:26358 MGI:1347050
definition	GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0042574 - retinal metabolism [Evidence IDA] codon_start : 1 note : Aldehyde dehydrogenase 1 (phenobarbitol inducible); aldehyde dehydrogenase family 1, subfamily A4 product : aldehyde dehydrogenase family 1, subfamily A7 protein_id : NP_036051.1

name	Tmc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20127392 GeneID:13409 MGI:2151016
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_process : GO:0007605 - sensory perception of sound [Evidence IMP] [Evidence IEA] codon_start : 1 note : deafness; transmembrane, cochlear expressed 1 product : transmembrane channel-like gene family 1 protein_id : NP_083229.1

name	LOC100042287 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270437 GeneID:100042287
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477936.1

name	LOC100042294 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270441 GeneID:100042294
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477948.1

name	LOC100041613 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270402 GeneID:100041613
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476739.1

name	Zfand5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677605 CCDS:CCDS29697.1 GeneID:22682 MGI:1278334
definition	GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : zinc finger protein 216 product : zinc finger, A20 domain containing 2 protein_id : NP_033577.1

name	Gda (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753960 CCDS:CCDS29698.1 GeneID:14544 MGI:95678
definition	GO_function : GO:0008892 - guanine deaminase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : guanine deaminase protein_id : NP_034396.1

name	LOC100041633 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270404 GeneID:100041633
definition	codon_start : 1 product : similar to C9orf57 protein protein_id : XP_001476781.1

name	1110059E24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384816 CCDS:CCDS29699.1 GeneID:66206 MGI:1913456
definition	codon_start : 1 product : RIKEN cDNA 1110059E24 protein_id : NP_079699.1

name	5730446C15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38142456 CCDS:CCDS29700.1 GeneID:226016 MGI:1917816
definition	GO_function : GO:0008233 - peptidase activity [Evidence IEA] codon_start : 1 product : Cgi67 serine protease precursor protein_id : NP_666208.2

name	Tmem2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:76253922 GeneID:83921 MGI:1890373
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : transmembrane protein 2 protein_id : NP_001028931.1

name	Tmem2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:76253926 GeneID:83921 MGI:1890373
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : transmembrane protein 2 protein_id : NP_114386.3

name	EG433229 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82998325 GeneID:433229 MGI:3645435
definition	codon_start : 1 product : hypothetical protein isoform 7 protein_id : XP_904967.1

name	Trpm3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:78214528 CCDS:CCDS29703.1 GeneID:226025 MGI:2443101
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005261 - cation channel activity [Evidence ISS]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006812 - cation transport [Evidence ISS]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2; melastatin 2 product : transient receptor potential cation channel, subfamily M, member 3 isoform b protein_id : NP_001030317.1

name	Trpm3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:78214530 CCDS:CCDS29704.1 GeneID:226025 MGI:2443101
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005261 - cation channel activity [Evidence ISS]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006812 - cation transport [Evidence ISS]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform c is encoded by transcript variant 3; melastatin 2 product : transient receptor potential cation channel, subfamily M, member 3 isoform c protein_id : NP_001030318.1

name	Trpm3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:78214526 CCDS:CCDS29702.1 GeneID:226025 MGI:2443101
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005261 - cation channel activity [Evidence ISS]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006812 - cation transport [Evidence ISS]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1; melastatin 2 product : transient receptor potential cation channel, subfamily M, member 3 isoform a protein_id : NP_001030316.1

name	Trpm3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:78214532 GeneID:226025 MGI:2443101
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005261 - cation channel activity [Evidence ISS]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006812 - cation transport [Evidence ISS]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform d is encoded by transcript variant 4; melastatin 2 product : transient receptor potential cation channel, subfamily M, member 3 isoform d protein_id : NP_001030319.1

name	Trpm3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:78214534 GeneID:226025 MGI:2443101
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005261 - cation channel activity [Evidence ISS]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006812 - cation transport [Evidence ISS]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform e is encoded by transcript variant 5; melastatin 2 product : transient receptor potential cation channel, subfamily M, member 3 isoform e protein_id : NP_001030320.1

name	LOC100041541 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041541
definition	number : 1 pseudo : _no_value

name	LOC100041560 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041560
definition	number : 1 pseudo : _no_value

name	LOC100041602 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041602
definition	number : 2 pseudo : _no_value

name	LOC100041602 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041602
definition	number : 1 pseudo : _no_value

name	1500015L24Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149270434 GeneID:68994 MGI:1916244
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA 1500015L24 gene transcript_id : XR_035354.1

clone name	MSMg01-100F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546L05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-331H01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-369D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086A17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-154F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458E13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-436D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144N16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-232K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152H02
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-237L11.b	B6Ng01-237L11.g
ACC	GA048598	GA048599
length	1,133	222
definition	B6Ng01-237L11.b	B6Ng01-237L11.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(21,236,416 - 21,237,469)	(21,354,416 - 21,354,637)
sequence	gaattcattcatcagtcttggttacaggatatcccttccactttgacgca cactctgttgctttcttgcataaagcatcaccattgatctccagtttcca tttttttaaagatttatttattattatatataagtacatggtagctgtct tcagatgcaccagaagaaggtgtcagatctcattatgggtggttgtgagt caccatatggtggctgggatttgaactcaggaccttcggaagagcagtcg gtgctcctatccactgagccatctcatcagccccagtttccattttttaa tggaataaaaagatacagacaactggtgagaagcataataataaactgct ctgtatatttatgaatattttgatatcttctaattttatgacatcttcct tatactttattatatagtactctcttttatagattctacccaaatgttta ttaattctcataaaatagatgtttttcttttcattcttatatttctttgg cttttatattatttaatgctttataatattaaatagaaaatacaacaggc ataaattgatttggaaaaaaacactgctgactcttgtttatgttatttgt attttgtttccttttaggagtttctggagtaggtgattgatctttcataa aagaaaagtgacaagagattagctttgtgaggaggaatctaagtgtctga ggtccattggctagaaccattcagtgggaatctgacatggctctaccatg agctagggagtctatgagggctgataatgaaagctcagggagagaaggga tctggttagaagtccagaggattaggatgaacggtgggtcaagtctagaa ctctggagaatctgaacattgtgaagtgtagaaagattatccttaagaaa agagaaagacaaagaaatgttagatatgtcaactagcacaagcccaactg attcctagacagcaacagccaggtcctctgcagtcaaggtgaggatttcc agagacagggtcacgatgctccccacaatggcttcaaatccggtgccttc tctttgaagagcatcatcacacatgagttatcactagctcaatcttacca gagtgccagggccagtctttaatagatacattc	acaatgcagccttatcacaccacacaggagcatctccaagtgaaaactac ctaaccaaccacacacttctgtgtaaacacctagaccacttcattcctgg atccaagtaggtgttcactgctgctgctcagctattgctcagtatcaaag gacggcatcaaaagggagagtccaagtaagaaaaataattcagaaggcct gggggggtgtggggtgatggtg
quality values	Open. Hide. 58 33 26 34 62 31 30 47 62 38 26 54 41 38 62 62 62 62 62 62 49 62 54 51 56 37 62 62 59 43 59 59 62 59 49 49 62 59 59 44 59 62 62 62 62 59 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 62 62 62 62 59 59 62 62 62 54 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 54 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 54 54 58 58 58 58 58 54 58 58 58 54 54 54 58 54 54 58 58 54 58 58 58 58 58 58 58 58 58 58 54 46 58 58 58 44 58 58 58 58 58 58 51 52 53 58 58 58 58 58 58 48 41 58 58 58 58 58 52 58 49 51 47 58 51 58 58 49 58 58 58 50 58 51 58 58 58 58 50 58 49 52 58 50 58 58 53 53 41 58 54 37 54 58 58 50 51 58 58 58 39 53 53 33 49 50 54 46 24 58 54 41 41 52 54 58 58 38 38 52 50 58 43 54 50 58 39 58 58 41 47 58 49 40 32 58 58 58 39 28 24 49 51 50 50 49 44 58 53 52 53 53 37 54 49 32 50 38 40 32 53 53 52 51 40 53 53 32 50 49 53 53 13 27 27 40 47 32 47 39 52 54 40 52 52 39 49 54 37 42 39 52 51 37 32 37 41 54 54 51 46 53 33 53 34 35 41 24 31 41 53 48 37 53 53 42 35 34 39 35 52 53 53 32 52 45 42 24 54 45 52 40 32 32 40 34 39 40 33 10 52 47 24 52 32 34 21 40 31 31 38 11 53 7 8 11 41 31 17 22 49 23 34 28 42 31 35 32 27 46 28 20 30 37 40 40 53 28 34 31 28 41 32 21 31 25 29 31 28 51 24 35 21 12 12 28 25 45 30 18 30 42 30 27 32 46 35 45 51 35 36 31 26 32 43 31 36 36 31 29 46 31 28 42 32 31 36 38 38 25 32 27 29 31 30 27 31 32 22 23 36 38 43 38 38 30 31 28 38 41 20 31 29 38 41 31 25 32 16 35 30 36 36 35 21 39 23 33 26 34 48 46 28 25 39 25 35 48 33 25 30 22 26 46 33 29 35 43 21 31 36 19 34 31 26 23 19 21 36 34 32 32 26 23 28 32 32 32 33 21 31 19 18 36 29 36 31 21 23 32 31 32 33 15 26 18 18 22 30 7 25 17 23 23 18 12 14 28 27 21 17 18 29 24 22 32 37 19 23 29 23 32 31 27 27 32 34 17 13 24 13 16 19 32 8 26 21 22 48 28 8 21 15 19 4 3 3 8 24 18 34 18 17 19 24 28 16 24 20 26 27 22 24 34 30 20 7 11 4 10 6 22 21 12 23 24 11 11 30 12 14 19 7 3 7 10 28 12 8 30 15 18 20 13 12 29 18 6 8 14 12 20 5 8 7 15 16 16 21 16 5 11 9 15 9 10 15 9 3 3 3 10 8 5 5 8 16 13 7 11 6 4 4 5 22 15 10 25 16 15 9 4 4 13 11 3 4 4 16 13 6 26 15 6 11 16 19 5 9 21 14 8 9 7 5 6 7 10 13 9 20 6 16 6 21	Open. Hide. 44 62 62 62 62 62 59 44 43 59 62 62 62 62 62 47 59 59 59 62 59 59 62 62 62 59 62 62 59 62 62 62 59 62 62 62 59 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 49 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 10 22

Alignment Information

BAC End 1

BAC End 2

seq1: chr19_21236416_21237469
seq2: B6Ng01-237L11.b_138_1181

seq1  TCCAGTTTCCATTTTTTTAAAGATTTATTTATTATTATATATAAGTACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTTTCCATTTTTTTAAAGATTTATTTATTATTATATATAAGTACAT  50

seq1  GGTAGCTGTCTTCAGATGCACCAGAAGAAGGTGTCAGATCTCATTATGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGCTGTCTTCAGATGCACCAGAAGAAGGTGTCAGATCTCATTATGGG  100

seq1  TGGTTGTGAGTCACCATATGGTGGCTGGGATTTGAACTCAGGACCTTCGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGTGAGTCACCATATGGTGGCTGGGATTTGAACTCAGGACCTTCGG  150

seq1  AAGAGCAGTCGGTGCTCCTATCCACTGAGCCATCTCATCAGCCCCAGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCAGTCGGTGCTCCTATCCACTGAGCCATCTCATCAGCCCCAGTTT  200

seq1  CCATTTTTTAATGGAATAAAAAGATACAGACAACTGGTGAGAAGCATAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTTTAATGGAATAAAAAGATACAGACAACTGGTGAGAAGCATAAT  250

seq1  AATAAACTGCTCTGTATATTTATGAATATTTTGATATCTTCTAATTTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAACTGCTCTGTATATTTATGAATATTTTGATATCTTCTAATTTTAT  300

seq1  GACATCTTCCTTATACTTTATTATATAGTACTCTCTTTTATAGATTCTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCTTCCTTATACTTTATTATATAGTACTCTCTTTTATAGATTCTAC  350

seq1  CCAAATGTTTATTAATTCTCATAAAATAGATGTTTTTCTTTTCATTCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATGTTTATTAATTCTCATAAAATAGATGTTTTTCTTTTCATTCTTA  400

seq1  TATTTCTTTGGCTTTTATATTATTTAATGCTTTATAATATTAAATAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTTTGGCTTTTATATTATTTAATGCTTTATAATATTAAATAGAAA  450

seq1  ATACAACAGGCATAAATTGATTTGGAAAAAAACACTGCTGACTCTTGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAACAGGCATAAATTGATTTGGAAAAAAACACTGCTGACTCTTGTTT  500

seq1  ATGTTATTTGTATTTTGTTTCCTTTTAGGAGTTTCTGGAGTAGGTGATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTATTTGTATTTTGTTTCCTTTTAGGAGTTTCTGGAGTAGGTGATTG  550

seq1  ATCTTTCATAAAAGAAAAGTGACAAGAGATTAGCTTTGTGAGGAGGAATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTCATAAAAGAAAAGTGACAAGAGATTAGCTTTGTGAGGAGGAATC  600

seq1  TAAGTGTCTGAGGTCCATTGGCTAGAACCATTCAGTGGGAATCTGACATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGTCTGAGGTCCATTGGCTAGAACCATTCAGTGGGAATCTGACATG  650

seq1  GCTCTACCATGAGCTAGGGAGTCTATGAGGGCTGATAATGAAGGCTCAGG  700
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GCTCTACCATGAGCTAGGGAGTCTATGAGGGCTGATAATGAAAGCTCAGG  700

seq1  GAGAGAAGGGATCTGGTTAGAAGTCCAGAGGATTAGGATGAACGGTGGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAAGGGATCTGGTTAGAAGTCCAGAGGATTAGGATGAACGGTGGGT  750

seq1  CAAGTCTAGAACTCTGGAGAATCTGAACATTGTGAAGTGTAGAAAGATTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCTAGAACTCTGGAGAATCTGAACATTGTGAAGTGTAGAAAGATTA  800

seq1  TCCTTAAGAAAAGAGAAAGACAAAGAAATGTTAGATATGTCAACTAGCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAAGAAAAGAGAAAGACAAAGAAATGTTAGATATGTCAACTAGCAC  850

seq1  AAGCCCAACTGATTCCTAAGACAGCAACAGCCAGGTCCTCTGCAGTCAAG  900
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AAGCCCAACTGATTCCT-AGACAGCAACAGCCAGGTCCTCTGCAGTCAAG  899

seq1  GTGAGGATTTCCAGAAGGACAGGGTCACGATGCTCCCCACCAATGGCTTT  950
      |||||||||||||||  |||||||||||||||||||||| ||||||| ||
seq2  GTGAGGATTTCCAGA--GACAGGGTCACGATGCTCCCCA-CAATGGC-TT  945

seq1  CAAATCCCGGTG-CTTCTCTTTGAAAGAAGCCATCATCACACATGAGGTT  999
      ||||| |||||| |||||||||| ||||   ||||||||||||||||  |
seq2  CAAAT-CCGGTGCCTTCTCTTTG-AAGA--GCATCATCACACATGAG--T  989

seq1  TATCACTAGCTCATTCTTACCAGAGGTGCCAAGGCCAGTCTTT-ATAGAT  1048
      ||||||||||||| |||||||||| |||||| ||||||||||| ||||||
seq2  TATCACTAGCTCAATCTTACCAGA-GTGCCAGGGCCAGTCTTTAATAGAT  1038

seq1  ACATTC  1054
      ||||||
seq2  ACATTC  1044

seq1: chr19_21354416_21354637
seq2: B6Ng01-237L11.g_69_290 (reverse)

seq1  CACCATCACCCCACACCCCCCCAGGCCTTCTGAATTATTTTTCTTACTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATCACCCCACACCCCCCCAGGCCTTCTGAATTATTTTTCTTACTTG  50

seq1  GACTCTCCCTTTTGATGCCGTCCTTTGATACTGAGCAATAGCTGAGCAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTCCCTTTTGATGCCGTCCTTTGATACTGAGCAATAGCTGAGCAGC  100

seq1  AGCAGTGAACACCTACTTGGATCCAGGAATGAAGTGGTCTAGGTGTTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTGAACACCTACTTGGATCCAGGAATGAAGTGGTCTAGGTGTTTAC  150

seq1  ACAGAAGTGTGTGGTTGGTTAGGTAGTTTTCACTTGGAGATGCTCCTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAGTGTGTGGTTGGTTAGGTAGTTTTCACTTGGAGATGCTCCTGTG  200

seq1  TGGTGTGATAAGGCTGCATTGT  222
      ||||||||||||||||||||||
seq2  TGGTGTGATAAGGCTGCATTGT  222

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information