BAC Information

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BAC

Clone NameB6Ng01-245O17
Chromosome19 (Build37)
Map Location 33,536,245 - 33,537,412
singlet/doubletsinglet
Overlap geneEG668095
Upstream geneLOC100042823, Minpp1, Papss2, Atad1, Pten, B430203M17Rik, 6530404N21Rik, LOC638381
Downstream geneLOC628236, AI747699, EG668106, EG668112, EG668114, EG329055, EG433241, LOC668127, Lipf, Lipk, EG383462, Lipn, Ankrd22, Stambpl1, Acta2, Fas
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-245O17.bB6Ng01-245O17.g
ACCGA054677GA054678
length1,1001,162
definitionB6Ng01-245O17.b B6Ng01-245O17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgggattttaggtagggaaatattccatgtgatttctatttttg
ccttaatataatgacaaatagtttaatggttaaataattttgtcaagcag
gattaaaggcatttcactgagagagtgattttagaagattgtcttgggtg
atctggtttgggactttgtgttactgataaaacacataataattatgata
aaattatcattatagcctatagtctactatataaatactaataactcttc
taaccaatgcactcatgttaaaaacttatacatagccgggcgtggtggcg
catgcctttaatcccagcactcgggaggcagaggaagttggatttctgag
ttctaggccagcctggtctacaaagtgagttccaggacagccagggctac
acagagaaaccctgtcttgaaaaaccaaaaccaaaccaaaccaaaacaaa
aaaatgtatacatatttatttgtttgtttgtttgtttagcaggagagagt
ctgtctgtctgtctgtctgtgcatgtaaatgctttagtatatgtttggag
gtcaggaaataacataagggaattggctatctcctttagccatgttggta
ctgggaatgaaactcagaagaattgggaacaaaacacccatggaaggagt
tacagagacaaagtttggagctgagacgaaaggatggaccatgtagagac
tgccttatccagggatccaccccataatcagcttccaaacgctgaccacc
attgcatatactagcaagatttatcaaaaggacccagatgtagctgtctc
tgtgagacttatgcccgggccctagcaaacacaagaaggtggatgctcac
agtcagcttattgatggatcacagggctcccatggagagctagggaagaa
cccaagagcttagggattgccaccctatagttgaacaacctattggaact
aacagtaccttgagagcctctgactcagctcgcatatgtattacaagaga
tggcctagctcgcattccttgagaagaggcccattgcactcaaactgatt
gcccatacagagaagtcccaggccaaaatatgaactggtggtatgataga

gaattctatgacatatgaataagtatataaaggatgtagaaaatataaat
ttattttataacagcttaaacaaaatataattttcaaccattttaataat
ggttaaaatatatcaaatagtatgtactccacagcaagtgaaatcaataa
ttagttgagaaaatatcatctatgaatggtaaaccttacatatttataaa
ataatgtatcattttatgctatatttagttttagtagtgtttagcatatc
tcagtttatatttattattaattatcaaatgtgttatttataagaatttg
aactaatgcttataagaagaataaaatataaactctcaaattagtacttg
caaaagttactttattaccctataattcaaatgatttcagaatattcttc
agataaattggttgttctttggattaacattttatgtaataaaatttgta
cccttcatatataatttcatttacataattcttcctccgtattgcacaac
agcattttacaaaaatattaagatagagttaaggtgaatattccttgtat
cctaaaattgaataacttaagaaattataatgatcagaagtatataacag
aaacaaatgttaagagagttgcagaatcctgaatagaattttatcaacaa
aacaataataagtggcattccttaggatacgatatattctgacttgttaa
taatggattatcattttcaacaaatggtgctgccacaactggtggtcatc
atgtagaagaatgtgaattgctttattcttatctccttgtacaaagctca
agtccaagtggatcaaggacctccacataaaaccagatacattgaaacta
atagaagagaacgtggggaagatcatcaaacacatgggcacagggaaaaa
cttcctgaacagaaaaacaatggcttatgctctaaaatcaatgatagaca
ataggacctcataacatttcaaagcttctataagcaatgacatgactata
gacaaatggcaactgaagattgggaaaagattcttattcaattctacatc
caatagaaggcttaatataaaataataacaaagacttcagattgaacctc
cgaagaattcaataacacctatgaaaatacagtgtctagacacaaaattc
tctatccatggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_33536245_33537412
seq2: B6Ng01-245O17.g_67_1228

seq1  GAATTCTATGACATATGAATAAGTATATAAAGGATGTAGAAAATATAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGACATATGAATAAGTATATAAAGGATGTAGAAAATATAAAT  50

seq1  TTATTTTATAACAGCTTAAACAAAATATAATTTTCAACCATTTTAATAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTATAACAGCTTAAACAAAATATAATTTTCAACCATTTTAATAAT  100

seq1  GGTTAAAATATATCAAATAGTATGTACTCCACAGCAAGTGAAATCAATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAAATATATCAAATAGTATGTACTCCACAGCAAGTGAAATCAATAA  150

seq1  TTAGTTGAGAAAATATCATCTATGAATGGTAAACCTTACATATTTATAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTGAGAAAATATCATCTATGAATGGTAAACCTTACATATTTATAAA  200

seq1  ATAATGTATCATTTTATGCTATATTTAGTTTTAGTAGTGTTTAGCATATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTATCATTTTATGCTATATTTAGTTTTAGTAGTGTTTAGCATATC  250

seq1  TCAGTTTATATTTATTATTAATTATCAAATGTGTTATTTATAAGAATTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTTATATTTATTATTAATTATCAAATGTGTTATTTATAAGAATTTG  300

seq1  AACTAATGCTTATAAGAAGAATAAAATATAAACTCTCAAATTAGTACTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAATGCTTATAAGAAGAATAAAATATAAACTCTCAAATTAGTACTTG  350

seq1  CAAAAGTTACTTTATTACCCTATAATTCAAATGATTTCAGAATATTCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGTTACTTTATTACCCTATAATTCAAATGATTTCAGAATATTCTTC  400

seq1  AGATAAATTGGTTGTTCTTTGGATTAACATTTTATGTAATAAAATTTGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAATTGGTTGTTCTTTGGATTAACATTTTATGTAATAAAATTTGTA  450

seq1  CCCTTCATATATAATTTCATTTACATAATTCTTCCTCCGTATTGCACAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCATATATAATTTCATTTACATAATTCTTCCTCCGTATTGCACAAC  500

seq1  AGCATTTTACAAAAATATTAAGATAGAGTTAAGGTGAATATTCCTTGTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTTACAAAAATATTAAGATAGAGTTAAGGTGAATATTCCTTGTAT  550

seq1  CCTAAAATTGAATAACTTAAGAAATTATAATGATCAGAAGTATATAACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAATTGAATAACTTAAGAAATTATAATGATCAGAAGTATATAACAG  600

seq1  AAACAAATGTTAAGAGAGTTGCAGAATCCTGAATAGAATTTTATCAACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAATGTTAAGAGAGTTGCAGAATCCTGAATAGAATTTTATCAACAA  650

seq1  AACAATAATAAGTGGCATTCCTTAGGATACGATATATTCTGACTTGTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATAATAAGTGGCATTCCTTAGGATACGATATATTCTGACTTGTTAA  700

seq1  TAATGGATTATCATTTTCAACAAATGGTGCTGCCACAACTGGTGGTCATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGATTATCATTTTCAACAAATGGTGCTGCCACAACTGGTGGTCATC  750

seq1  ATGTAGAAGAATGTGAATTGCTTTATTCTTATCTCCTTGTACAAAGCTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGAAGAATGTGAATTGCTTTATTCTTATCTCCTTGTACAAAGCTCA  800

seq1  AGTCCAAGTGGATCAAGGACCTCCACATAAAACCAGATACATTGAAACTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCAAGTGGATCAAGGACCTCCACATAAAACCAGATACATTGAAACTA  850

seq1  ATAGAAGAGAACGTGGGGAAGATCATCAAACACATGGGCACAGGGAAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAGAGAACGTGGGGAAGATCATCAAACACATGGGCACAGGGAAAAA  900

seq1  CTTCCTGAACAGAAAAACAATGGCTTATGCTCTAAAATCAATGATAGACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CTTCCTGAACAGAAAAACAATGGCTTATGCTCTAAAATCAATGATAGAC-  949

seq1  AATAGGACCTCATAACATTTCAAAGCTTCTATAAGGCAAATGACATGGAC  1000
      |||||||||||||||||||||||||||||||||||   |||||||| |||
seq2  AATAGGACCTCATAACATTTCAAAGCTTCTATAAG--CAATGACAT-GAC  996

seq1  TATAGGACAAAATGGCAACTGAGAGATTGGGAAAAGATCCTTA-TCAATC  1049
      |||| ||| ||||||||||||| ||||||||||||||| |||| ||||| 
seq2  TATA-GAC-AAATGGCAACTGA-AGATTGGGAAAAGATTCTTATTCAATT  1043

seq1  CTACATCCAATAGAGGGC-TAATATAAATATATACAAAGGACTCAAGAAT  1098
      |||||||||||||| ||| |||||||||   |||  || ||||  || ||
seq2  CTACATCCAATAGAAGGCTTAATATAAAATAATAACAAAGACTTCAG-AT  1092

seq1  TTAGACTCCAGAGAATCAAATAACACTATTAAAAATACAGTG-CTAGACA  1147
      | |  ||||  |||||  ||||||||   | ||||||||||| |||||||
seq2  TGAACCTCCGAAGAATTCAATAACACCTATGAAAATACAGTGTCTAGACA  1142

seq1  AAATATTCTCTATCGAATGGC  1168
       || ||||||||||  |||||
seq2  CAAAATTCTCTATC-CATGGC  1162