BAC Information

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BAC

Clone NameB6Ng01-247F18
Chromosome19 (Build37)
Map Location 13,390,649 - 13,521,148
singlet/doubletdoublet
Overlap geneOlfr1466, Olfr1467, Olfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301
Upstream geneOlfr1437, Olfr1438-ps1, Olfr1439-ps1, Olfr1440, Olfr1441, Pfpl, Mpeg1, Dtx4, EG625046, 4632417K18Rik, EG240549, Glyat, Olfr1442, Olfr1443, Keg1, Zfp91, Cntf, Lpxn, EG383436, Olfr1444, Olfr1445, Olfr1446, Olfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451, Olfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1, Olfr1457, EG667271, Olfr1459, Olfr1460-ps1, Olfr1461, Olfr1462, Olfr1463, LOC667300, Olfr1465
Downstream geneOlfr1472, Olfr1473-ps1, Olfr1474, Olfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655, Olfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653, Olfr1487, GA_x5J8B7W6KF8-5425983-5425664, Olfr1489, Olfr1490, Olfr1491, Olfr1492-ps1, Olfr1493-ps1, Olfr1494, Olfr1495, Olfr1496, Olfr1497, Olfr1498-ps1, Olfr1499, Olfr1500, Olfr1501, Olfr1502, Olfr1503-ps1, Olfr1504, Olfr1505, EG667433
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-247F18.bB6Ng01-247F18.g
ACCGA055715GA055716
length1,1021,134
definitionB6Ng01-247F18.b B6Ng01-247F18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,390,649 - 13,391,739)(13,520,012 - 13,521,148)
sequence
gaattctttcagaatggctgcaacataaatcatgtttttgtttgcattga
agcttttgatataatatttactttaaaaatgattattacctaccccaagt
ctcttgatatcctagaaattttaggttacaaactattattatagagacta
ttttcagaaaatattatccacaattaacaaggaatttacacatgatgaat
aattttctgttatttttagtaatacttgttatgttatcattgatgaaact
tggaaattaaaatgttacaacatagtataaagttattttttatcatgaaa
aatattcagagcattttaatccttataccaatattaaactcatcattttc
aaactatgtaatgatcatctctctataattatagcaaaaatgttaaaatg
gatatatgatcgtgaattttactcttcttgttttctctatgcttcttcat
aaccaataataagattagaaaagtattcacagtgattcagaatatcttgg
ttttagtttttgttttgtttgttttttgttttgttaactactgtgttaag
agaataggtaaacttcctaaaatagaactttttgcctttgtatcataaac
ttcctccagtctttgttttagaaaagatttccatgatccccttttccctt
aacatatatcacaataggcacttctaccccactccctttctcactgagaa
tgtttatttaatatacatgaagagccaccaattctttggaagaagagagt
aaaaccaattgtgtggacatgacataatcaagtaaaccttagagtgctgg
ttacacagttcttcctcagggagtgcactaacacttttcatgttctctaa
aacatgaaaatcagaagaaatagagaaaataagcttttgactttttgaac
ctaaattcttcctttctcaaggatgggttacacatttgccttacctacaa
cagaaaaatgagaagattgaattatctcataatatttatcccttgtgcct
taaaaaacaatgtctacatgacatcatacaattaaatattgttcaatatt
agcatttacctttcaattgattttttcttaaattattccatgaaggatta
ac
gaattcagtattagttagctttggataatatgatttccctcattatggaa
agtaatccatttctgagattattctaacctcaagattcaagattcctgta
tgaccaagaccatacaaaatgatgctatttagactaaaatatttgcactc
tatttaagaagatctcaggatagagctttatattattcatataagagaat
atttgatttatatcagttaagaatgttatacactgtttgaactttaatta
ttaatgaaatacaaggccttgaattaaaaaaagagtaagccaagcaaagt
atatactatgagttgaagggaagaaacagaaagggaaaattacataattt
cttcaaatatataaatagtaataatcataacaataatttaagtgaatata
caacttttatcacaaacaaataaaatggaactaaaatatattttataaaa
tcttgtgaaacattattgcttgggaattttgagcactataatcttcattt
aactattaaattgatattttaattctggcaaaatatactcgaatatcact
aaatattaataaaatggccaatgcattaagacaaatttttcattaagaaa
aaggcagttgaaagaaatcatagacaagaaatacttacaaatgaattatt
cttcaaagttaaaaataaaacatttcacaggcttgagaaatagtttagaa
ttaatcaactaaatgaaatgaagacattaatttttcaacaactttcttaa
atgcattttttacctctttgttcctcaggctgtagaccacagggttcagc
ataggaatgaccattgtataaaacacagatgcaattttgtctgtgtccat
ggaatgattgaaactgggctgtaagtacatgaatataagggaaccaaaga
agatagacacagtgatgagatgagatgcacaggtagagaatgccttcctc
tgtgcttcagctgaacgcatccctcaggatagcaatgaaaataagcagta
agtgtttagatactaagagagtgaaaaacacatcatgtagccaagacagg
cagtgtatctcatttgtgtggggtgtcagaacaagaatgtcaagccagtt
gggggaatgtcacagaaaaagtgatcattcacgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_13390649_13391739
seq2: B6Ng01-247F18.b_50_1151

seq1  GAATTCTTTCAGAATGGCTGCAACATAAATCATGTTTTTGTTTGCATTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCAGAATGGCTGCAACATAAATCATGTTTTTGTTTGCATTGA  50

seq1  AGCTTTTGATATAATATTTACTTTAAAAATGATTATTACCTACCCCAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTTGATATAATATTTACTTTAAAAATGATTATTACCTACCCCAAGT  100

seq1  CTCTTGATATCCTAGAAATTTTAGGTTACAAACTATTATTATAGAGACTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGATATCCTAGAAATTTTAGGTTACAAACTATTATTATAGAGACTA  150

seq1  TTTTCAGAAAATATTATCCACAATTAACAAGGAATTTACACATGATGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGAAAATATTATCCACAATTAACAAGGAATTTACACATGATGAAT  200

seq1  AATTTTCTGTTATTTTTAGTAATACTTGTTATGTTATCATTGATGAAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCTGTTATTTTTAGTAATACTTGTTATGTTATCATTGATGAAACT  250

seq1  TGGAAATTAAAATGTTACAACATAGTATAAAGTTATTTTTTATCATGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAATTAAAATGTTACAACATAGTATAAAGTTATTTTTTATCATGAAA  300

seq1  AATATTCAGAGCATTTTAATCCTTATACCAATATTAAACTCATCATTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCAGAGCATTTTAATCCTTATACCAATATTAAACTCATCATTTTC  350

seq1  AAACTATGTAATGATCATCTCTCTATAATTATAGCAAAAATGTTAAAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTATGTAATGATCATCTCTCTATAATTATAGCAAAAATGTTAAAATG  400

seq1  GATATATGATCGTGAATTTTACTCTTCTTGTTTTCTCTATGCTTCTTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATATGATCGTGAATTTTACTCTTCTTGTTTTCTCTATGCTTCTTCAT  450

seq1  AACCAATAATAAGATTAGAAAAGTATTCACAGTGATTCAGAATATCTTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAATAATAAGATTAGAAAAGTATTCACAGTGATTCAGAATATCTTGG  500

seq1  TTTTAGTTTTTGTTTTGTTTGTTTTTTGTTTTGTTAACTACTGTGTTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGTTTTTGTTTTGTTTGTTTTTTGTTTTGTTAACTACTGTGTTAAG  550

seq1  AGAATAGGTAAACTTCCTAAAATAGAACTTTTTGCCTTTGTATCATAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAGGTAAACTTCCTAAAATAGAACTTTTTGCCTTTGTATCATAAAC  600

seq1  TTCCTCCAGTCTTTGTTTTAGAAAAGATTTCCATGATCCCCTTTTCCCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCAGTCTTTGTTTTAGAAAAGATTTCCATGATCCCCTTTTCCCTT  650

seq1  AACATATATCACAATAGGCACTTCTACCCCACTCCCTTTCTCACTGAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATATCACAATAGGCACTTCTACCCCACTCCCTTTCTCACTGAGAA  700

seq1  TGTTTATTTAATATACATGAAGAGCCACCAATTCTTTGGAAGAAGAGAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATTTAATATACATGAAGAGCCACCAATTCTTTGGAAGAAGAGAGT  750

seq1  AAAACCAATTGTGTGGACATGACATAATCAAGTAAACCTTAGAGTGCTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCAATTGTGTGGACATGACATAATCAAGTAAACCTTAGAGTGCTGG  800

seq1  TTACACAGTTCTTCCTCAGGGAGTGCACTAACAC-TTTCATGTTCTCTAA  849
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTACACAGTTCTTCCTCAGGGAGTGCACTAACACTTTTCATGTTCTCTAA  850

seq1  AACATGAAAATCAGAAGAAATAGAGAAAATAAGC-TTTGAC-TTTTGAAC  897
      |||||||||||||||||||||||||||||||||| |||||| ||||||||
seq2  AACATGAAAATCAGAAGAAATAGAGAAAATAAGCTTTTGACTTTTTGAAC  900

seq1  CTAAATTCTTCCTTTCTCAAGGATGGGTTACACATTTGCCTTACCTACAA  947
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CTAAATTCTTCCTTTCTCAAGGATGGGTTACACATTTGCCTTACCTAC-A  949

seq1  ACAGAAAAATGAGAAGATTGAA-TATCTCATAAATATTATCCCTTGTGCC  996
      |||||||||||||||||||||| ||||||||||   ||||||||||||||
seq2  ACAGAAAAATGAGAAGATTGAATTATCTCATAATATTTATCCCTTGTGCC  999

seq1  TTAAAAAACAATGTCTACATGACATCATACAAATAAATAT--GTCAATA-  1043
      |||||||||||||||||||||||||||||||| |||||||   |||||| 
seq2  TTAAAAAACAATGTCTACATGACATCATACAATTAAATATTGTTCAATAT  1049

seq1  TAGCATTTACC-TTCAAATGA-TTTTTCTTAAA-TATT-CATGAA-GATT  1088
      ||||||||||| ||||| ||| ||||||||||| |||| |||||| ||||
seq2  TAGCATTTACCTTTCAATTGATTTTTTCTTAAATTATTCCATGAAGGATT  1099

seq1  AAC  1091
      |||
seq2  AAC  1102

seq1: chr19_13520012_13521148
seq2: B6Ng01-247F18.g_67_1200 (reverse)

seq1  ACGTGATTAATCACTTTTTCTGTGACATTCCCCC-ACT-GCTGGACATTT  48
      |||||| | ||||||||||||||||||||||||| ||| ||| |||| ||
seq2  ACGTGAATGATCACTTTTTCTGTGACATTCCCCCAACTGGCTTGACA-TT  49

seq1  CTTGTTCTGACA-CCCACACAAATGAGATTACACTGCTTGTCTTGGCTAC  97
      |||||||||||| ||||||||||||||| |||||||| ||||||||||||
seq2  CTTGTTCTGACACCCCACACAAATGAGA-TACACTGCCTGTCTTGGCTAC  98

seq1  ATTGGATGTTGTTTTCACTCTCTTAGTTATCTTAAACACTTACCTGCTTA  147
      ||  |||||  ||||||||||||||| |||| |||||||||| |||||||
seq2  AT--GATGTGTTTTTCACTCTCTTAG-TATC-TAAACACTTA-CTGCTTA  143

seq1  TTTTCATTGCTATCCTGA-GGATGCGTTCAGCTGAAGCACAGAGGAAGGC  196
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TTTTCATTGCTATCCTGAGGGATGCGTTCAGCTGAAGCACAGAGGAAGGC  193

seq1  ATTCTCTACCTGTGCATCTCATCTCATCACTGTGTCTATCTTCTTTGGTT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTACCTGTGCATCTCATCTCATCACTGTGTCTATCTTCTTTGGTT  243

seq1  CCCTTATATTCATGTACTTACAGCCCAGTTTCAATCATTCCATGGACACA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTATATTCATGTACTTACAGCCCAGTTTCAATCATTCCATGGACACA  293

seq1  GACAAAATTGCATCTGTGTTTTATACAATGGTCATTCCTATGCTGAACCC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAATTGCATCTGTGTTTTATACAATGGTCATTCCTATGCTGAACCC  343

seq1  TGTGGTCTACAGCCTGAGGAACAAAGAGGTAAAAAATGCATTTAAGAAAG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTCTACAGCCTGAGGAACAAAGAGGTAAAAAATGCATTTAAGAAAG  393

seq1  TTGTTGAAAAATTAATGTCTTCATTTCATTTAGTTGATTAATTCTAAACT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGAAAAATTAATGTCTTCATTTCATTTAGTTGATTAATTCTAAACT  443

seq1  ATTTCTCAAGCCTGTGAAATGTTTTATTTTTAACTTTGAAGAATAATTCA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCAAGCCTGTGAAATGTTTTATTTTTAACTTTGAAGAATAATTCA  493

seq1  TTTGTAAGTATTTCTTGTCTATGATTTCTTTCAACTGCCTTTTTCTTAAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAAGTATTTCTTGTCTATGATTTCTTTCAACTGCCTTTTTCTTAAT  543

seq1  GAAAAATTTGTCTTAATGCATTGGCCATTTTATTAATATTTAGTGATATT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATTTGTCTTAATGCATTGGCCATTTTATTAATATTTAGTGATATT  593

seq1  CGAGTATATTTTGCCAGAATTAAAATATCAATTTAATAGTTAAATGAAGA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTATATTTTGCCAGAATTAAAATATCAATTTAATAGTTAAATGAAGA  643

seq1  TTATAGTGCTCAAAATTCCCAAGCAATAATGTTTCACAAGATTTTATAAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGTGCTCAAAATTCCCAAGCAATAATGTTTCACAAGATTTTATAAA  693

seq1  ATATATTTTAGTTCCATTTTATTTGTTTGTGATAAAAGTTGTATATTCAC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTTTAGTTCCATTTTATTTGTTTGTGATAAAAGTTGTATATTCAC  743

seq1  TTAAATTATTGTTATGATTATTACTATTTATATATTTGAAGAAATTATGT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTATTGTTATGATTATTACTATTTATATATTTGAAGAAATTATGT  793

seq1  AATTTTCCCTTTCTGTTTCTTCCCTTCAACTCATAGTATATACTTTGCTT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCCCTTTCTGTTTCTTCCCTTCAACTCATAGTATATACTTTGCTT  843

seq1  GGCTTACTCTTTTTTTAATTCAAGGCCTTGTATTTCATTAATAATTAAAG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTACTCTTTTTTTAATTCAAGGCCTTGTATTTCATTAATAATTAAAG  893

seq1  TTCAAACAGTGTATAACATTCTTAACTGATATAAATCAAATATTCTCTTA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACAGTGTATAACATTCTTAACTGATATAAATCAAATATTCTCTTA  943

seq1  TATGAATAATATAAAGCTCTATCCTGAGATCTTCTTAAATAGAGTGCAAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATAATATAAAGCTCTATCCTGAGATCTTCTTAAATAGAGTGCAAA  993

seq1  TATTTTAGTCTAAATAGCATCATTTTGTATGGTCTTGGTCATACAGGAAT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAGTCTAAATAGCATCATTTTGTATGGTCTTGGTCATACAGGAAT  1043

seq1  CTTGAATCTTGAGGTTAGAATAATCTCAGAAATGGATTACTTTCCATAAT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAATCTTGAGGTTAGAATAATCTCAGAAATGGATTACTTTCCATAAT  1093

seq1  GAGGGAAATCATATTATCCAAAGCTAACTAATACTGAATTC  1137
      |||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAAATCATATTATCCAAAGCTAACTAATACTGAATTC  1134