BAC Information

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BAC

Clone NameB6Ng01-248F20
Chromosome19 (Build37)
Map Location 33,097,049 - 33,098,147
singlet/doubletsinglet
Overlap genenone
Upstream geneAsah2, EG668042, Sgms1, 2700046G09Rik, LOC100042138, LOC672490, LOC100042823, Minpp1, Papss2, Atad1, Pten, B430203M17Rik
Downstream gene6530404N21Rik, LOC638381, EG668095, LOC628236, AI747699, EG668106, EG668112, EG668114, EG329055, EG433241, LOC668127, Lipf, Lipk
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-248F20.bB6Ng01-248F20.g
ACCGA056462GA056463
length7941,103
definitionB6Ng01-248F20.b B6Ng01-248F20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactcctacaactcaaaaggaataggaaagctcaattaaaatgaa
caaagggcttgaatcaatacaatgcccaagaaatacagatgaatacatga
aaatgtactcaacatcattatccattagggaagtgcatagcaagaccaca
cagtgtgataaacagtgaacttacaaccactagagctataaattcattag
catacattaagtttataaaaccattattctcaatgtcttttgttgaagat
agctataactttttaatataaatcaaggagtctttgtgaggatatggaga
agtgaagtgtttgtgcttttctgtaaggaatatgcaatgagtccacttcc
taagaaaacaactgggtggtaaattatgatcctgtcattctcaaaagagt
caactgaatatcttcagataatttggacaacaatattcaaaatagccaaa
tttataaacagcccaaagttcatcagctgatggaatgtggcatatccata
cactggaatatagttcaaacataaaaattggtcaactactgataaatgct
agatcgtggaaaagccttgaaaggatcatgctaaatggaagaagccaatc
acaaaggttatatatcaaatgattctatttatgtggcatctctactatgg
gcagatctactgggaacatcatccatttcagggtaggtctcatgttcaag
aatagctgaccaacatacaatggaccccacacatttttgtctgattttac
ttggttacagtttggtgggggttttttttgttttgtttgtttat
gaattccacatcactgatagtctcatccattgcaagagtcagaggcagaa
ttagaacccaaggattttgcattctaggagtttggtagagaactccactg
tacaccatagagtcctcaggcgctccagcagtctgcacagacagaatata
gtttgtagtctcgtctctgatgcttgaacttgttgctatgtcttgtaaga
tatttttcgtaactggtcctgagactcatctgcagggtggagagggatct
tccataaacaagaatggttgctgaagggggaaaatattccttgttttctt
tagaacaaaacatccaagctgcatgggaatgcaccacatgattttttttt
tttttttttttgtgaattgaagtcaatttggcaccaacagaaataacttt
aggaacaaagtttgtatacagtgtgttcttacggaaacagcagttagaac
ccagagtaaactgttaaagacagcctcttctggagttgtatgagatgcct
ttgggtggagatagtaaattgtttcgtttataagctttgtacatcaaaag
ctagatctgcttatgctttaaaaccaaaaggagggggaagacttattttt
agctatgtgaaatttaaaccaaacccaacatggactgtggatgcttcagg
ccacaccatgtcaaagaattcctcagagacattaagcaatgatatggaag
attcttctgctataatgtgggttagtaatgggacagtgaacttaggagag
tggatttctaggaagtacagaaagctggctgggtgggatgggatggccca
ggggtaactaggctcagctctatgataatgggttatggcatctgggaaca
gaaaagcatttttggtgttacgttagatcagtggaccaagattgcctgat
tgcattcaatttgttagagaaagctatttgaatgttgtgttgttattttt
gtaaatggggattttaaatattgtgttgtttgtagaatgcttattcatac
ccgctttagttaagtttaaaatattttgttattcttaactgcttacagaa
ctttcttaacgaagaagtaaccacttaggcaatttgagttagaacttaca
att
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_33097049_33098147
seq2: B6Ng01-248F20.g_68_1170

seq1  GAATTCCACATCACTGATAGTCTCATCCATTGCAAGAGTCAGAGGCAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACATCACTGATAGTCTCATCCATTGCAAGAGTCAGAGGCAGAA  50

seq1  TTAGAACCCAAGGATTTTGCATTCTAGGAGTTTGGTAGAGAACTCCACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAACCCAAGGATTTTGCATTCTAGGAGTTTGGTAGAGAACTCCACTG  100

seq1  TACACCATAGAGTCCTCAGGCGCTCCAGCAGTCTGCACAGACAGAATATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACCATAGAGTCCTCAGGCGCTCCAGCAGTCTGCACAGACAGAATATA  150

seq1  GTTTGTAGTCTCGTCTCTGATGCTTGAACTTGTTGCTATGTCTTGTAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTAGTCTCGTCTCTGATGCTTGAACTTGTTGCTATGTCTTGTAAGA  200

seq1  TATTTTTCGTAACTGGTCCTGAGACTCATCTGCAGGGTGGAGAGGGATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTCGTAACTGGTCCTGAGACTCATCTGCAGGGTGGAGAGGGATCT  250

seq1  TCCATAAACAAGAATGGTTGCTGAAGGGGGAAAATATTCCTTGTTTTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATAAACAAGAATGGTTGCTGAAGGGGGAAAATATTCCTTGTTTTCTT  300

seq1  TAGAACAAAACATCCAAGCTGCATGGGAATGCACCACATGATTTTTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACAAAACATCCAAGCTGCATGGGAATGCACCACATGATTTTTTTTT  350

seq1  TTTTTTTTTTTGTGAATTGAAGTCAATTTGGCACCAACAGAAATAACTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTGTGAATTGAAGTCAATTTGGCACCAACAGAAATAACTTT  400

seq1  AGGAACAAAGTTTGTATACAGTGTGTTCTTACGGAAACAGCAGTTAGAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACAAAGTTTGTATACAGTGTGTTCTTACGGAAACAGCAGTTAGAAC  450

seq1  CCAGAGTAAACTGTTAAAGACAGCCTCTTCTGGAGTTGTATGAGATGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGTAAACTGTTAAAGACAGCCTCTTCTGGAGTTGTATGAGATGCCT  500

seq1  TTGGGTGGAGATAGTAAATTGTTTCGTTTATAAGCTTTGTACATCAAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTGGAGATAGTAAATTGTTTCGTTTATAAGCTTTGTACATCAAAAG  550

seq1  CTAGATCTGCTTATGCTTTAAAACCAAAAGGAGGGGGAAGACTTATTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATCTGCTTATGCTTTAAAACCAAAAGGAGGGGGAAGACTTATTTTT  600

seq1  AGCTATGTGAAATTTAAACCAAACCCAACATGGACTGTGGATGCTTCAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATGTGAAATTTAAACCAAACCCAACATGGACTGTGGATGCTTCAGG  650

seq1  CCACACCATGTCAAAGAATTCCTCAGAGACATTAAGCAATGATATGGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACCATGTCAAAGAATTCCTCAGAGACATTAAGCAATGATATGGAAG  700

seq1  ATTCTTCTGCTATAATGTGGGTTAGTAATGGGACAGTGAACTTAGGAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTCTGCTATAATGTGGGTTAGTAATGGGACAGTGAACTTAGGAGAG  750

seq1  TGGATTTCTAGGAAGTACAGAAGGCTGGCTGGGTGGGATGGGATGGCCCA  800
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TGGATTTCTAGGAAGTACAGAAAGCTGGCTGGGTGGGATGGGATGGCCCA  800

seq1  GGGGTAACTAGGCTCAGCTCTATGATAATGGG-TATGGCATCTGGGAACA  849
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GGGGTAACTAGGCTCAGCTCTATGATAATGGGTTATGGCATCTGGGAACA  850

seq1  GAAAAGGCATTTTTGGTGTTACGTTAGATCAGTGGACCAAAGGATTGCCT  899
      ||||| ||||||||||||||||||||||||||||||||||  ||||||||
seq2  GAAAA-GCATTTTTGGTGTTACGTTAGATCAGTGGACCAA--GATTGCCT  897

seq1  GA-TGCATTCAATTTGTAAGAGAAAGCTAATTTGAA--ATGTG-TGTGTA  945
      || |||||||||||||| |||||||||| |||||||   |||| |||   
seq2  GATTGCATTCAATTTGTTAGAGAAAGCT-ATTTGAATGTTGTGTTGTTAT  946

seq1  TTTTGTAAATGGGAATTTAAAAATATGTGT--GTTGTAG-ATGC-TATTC  991
      ||||||||||||| |||| |||   |||||   |||||| |||| |||||
seq2  TTTTGTAAATGGGGATTTTAAATATTGTGTTGTTTGTAGAATGCTTATTC  996

seq1  ATACCGGTTTTAGTTAAGTTTAAAAATATTTGTTAATCTAAAAGTGCTTA  1041
      ||||| | |||||||||||||||||   ||||||| |||  || ||||||
seq2  ATACCCGCTTTAGTTAAGTTTAAAATATTTTGTTATTCT-TAACTGCTTA  1045

seq1  CCAGAAACTTCTTACCAAAGAAGTAACCAC-TAAGCATTTTGAG-TAGAC  1089
       |||||  |||||| | ||||||||||||| || ||| |||||| |||| 
seq2  -CAGAACTTTCTTAACGAAGAAGTAACCACTTAGGCAATTTGAGTTAGA-  1093

seq1  ATTTACAATT  1099
      | ||||||||
seq2  ACTTACAATT  1103