BAC Information

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BAC

Clone NameB6Ng01-249E04
Chromosome19 (Build37)
Map Location 14,960,146 - 14,960,391
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr1504, Olfr1505, EG667433, Tle4
Downstream geneEG433225, EG635497, Pomc-ps1, LOC667482
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-249E04.bB6Ng01-249E04.g
ACCGA057128GA057129
length880354
definitionB6Ng01-249E04.b B6Ng01-249E04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaaaagatgaaacccaaataggagagaaacaaataaagaaatg
ttcaacatatttaatcatcatgtgattgcaacccaatagtcctttgagat
ttcctcttacgccagtcagaatgaataacatcaataaaagatgttagagc
tcatgttggcaagggtgtagagtcagtagagcttaaaataccattgctgc
tgggagtgtacacttgtaaaagccgctacaaaagtcagtgtagcacacgg
tagccaaaaattggaaacaacctacatgcccctaaaaaagaaagtaaatg
gatgagaaaatgtggcttatttatacaatgcagcatcatatccattaaaa
aatgaaatccttgtgtctaaaccaccaaccaaattatatacttggagggg
tccttggctctagctgcatatgtagtagaggatagccttctctggcatca
gtggctggagaggcccttggtcctataaaggctagattcctcattgtagg
ggaatgccagggcagtgaggtgggagtgggtaggtgggtgggagggtggg
tttcagaagggttcctaccatctttagcctgctaagagtgacgggccatg
ccgagatgttgatatgagctgatcactgtctccccacagggagtctagaa
tttgggtatttgtaggtgtgtctggcagatgctgcctgcatcactagtct
ccaataaaaatttcaggacctggagtctctaatgagcttctggtttgtca
attttttactagcactgtcacaacttgttagtgggggcgattgagcacct
ccggctcatggtactcatgggaagggacctttgtgaacctgcacctgatt
ttctctgtcttattcaacatgccttcttct
gaattcaaacagtgcagggactttgagtcaggaacccatacaaagaccat
agaggaatgttgctcactgagtctctcatcatggcttccttattatcctt
tctttcttatatatatacatgtccataagcatccacatatttatgtgcat
gtcaaaataggacagcatatacatgtacatatatatatatatatatatat
atatatatgtatatatatatataacttttttcatatcatacctattctaa
agtgtgcactgggcattgtaaatgtgatagcttttaatctttttaaaaag
taaaaaatataaaaatcttaactattatgtgaagacctcatgaaagaatt
ataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_14960146_14960391
seq2: B6Ng01-249E04.g_173_418

seq1  ATATATATACAT----------ATATACATATATATGTGTA---------  31
      ||||||||||||          ||  |||||| |||||| |         
seq2  ATATATATACATGTCCATAAGCATCCACATATTTATGTGCATGTCAAAAT  50

seq1  -------CATATATATGT--GTATATATATATATATGTGTGTGTGTATGT  72
             |||||| ||||   ||||||||||||||| | | | | ||| |
seq2  AGGACAGCATATACATGTACATATATATATATATATATATATATATATAT  100

seq1  GTATGGCAATGACCATTTGCTTGATGATTGATTGAAACTAGTGATCTGGA  122
      ||||          || |        ||  ||   ||||       |   
seq2  GTAT----------ATAT--------ATATAT---AACT-------TTTT  122

seq1  TCAGGTCACATACCTATTCTAGATTGTTGGGCAAGGGGCCAAGAACTCAC  172
      |||  |  ||||||||||||| | |||   |||  ||||       |   
seq2  TCA--TATCATACCTATTCTAAAGTGT---GCACTGGGC------ATTGT  161

seq1  AGGTGTGCTAGATAGCTT----CCTTTCACATGAGCCTAAATGACAAAAA  218
      |  |||    ||||||||     ||||   |  ||   |||  | |||||
seq2  AAATGT----GATAGCTTTTAATCTTTTTAAAAAGTAAAAAATATAAAAA  207

seq1  -----------ATGTGTGTAAGTAGTGAAAGAATTATAA  246
                 |||||   |  |  ||||||||||||||
seq2  TCTTAACTATTATGTGAAGACCTCATGAAAGAATTATAA  246