BAC Information

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BAC

Clone NameB6Ng01-251P07
Chromosome19 (Build37)
Map Location 13,423,426 - 13,551,571
singlet/doubletdoublet
Overlap geneOlfr1467, Olfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472, Olfr1473-ps1, Olfr1474
Upstream geneOlfr1440, Olfr1441, Pfpl, Mpeg1, Dtx4, EG625046, 4632417K18Rik, EG240549, Glyat, Olfr1442, Olfr1443, Keg1, Zfp91, Cntf, Lpxn, EG383436, Olfr1444, Olfr1445, Olfr1446, Olfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451, Olfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1, Olfr1457, EG667271, Olfr1459, Olfr1460-ps1, Olfr1461, Olfr1462, Olfr1463, LOC667300, Olfr1465, Olfr1466
Downstream geneOlfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655, Olfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653, Olfr1487, GA_x5J8B7W6KF8-5425983-5425664, Olfr1489, Olfr1490, Olfr1491, Olfr1492-ps1, Olfr1493-ps1, Olfr1494, Olfr1495, Olfr1496, Olfr1497, Olfr1498-ps1, Olfr1499, Olfr1500, Olfr1501, Olfr1502, Olfr1503-ps1, Olfr1504, Olfr1505, EG667433, Tle4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251P07.bB6Ng01-251P07.g
ACCGA059083GA059084
length1,0021,151
definitionB6Ng01-251P07.b B6Ng01-251P07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,423,426 - 13,424,026)(13,550,410 - 13,551,571)
sequence
gaattcattataccaccccaacagattcattagagcctcaatattttgcc
ctacatccaggccgtacatccagggtcccactagtacttttatttctgtc
tattttggcttcattttttaaaaaatcaagtgtccaaaaatgtgtgattt
tatttctgggcctttgattagattccatccatcaacctgtctttttctat
accaataccatgcaaatttatgcaatacagctatagatcaggaatgctga
taccccctaaagttctattattgtacaggattgttttagatttcctgggt
tttcgtttttccatatgaagtagaaaattgttctatcatggtctgtaaag
acgtttgtttgggattttcatgggaattgtattgaatttgtaaatttatt
tttgtaaggtgtccatcaacacttgcataactcattgcacatggagaagt
gaagctggtgtatctttgtaacgtttctacagtaaaacacactcggacaa
ccaggtctttctatggcaaagctttttattgtttacttttcaggaagacc
tcgaacccggaaaatggagctgcttaaatacccctctgtgtgatgtgtca
gctcttgattagctgtttacttatcaccccactgctacactccgagatgg
gcagtgacttggcacgaatttactctagcacctgcgcacattgcttgttt
actagttaggcactgtgaaagccagagccatcttgtaatggtgattgttt
atggctctctacatctccccctttttattttattaaaacgcaagccactc
tttaatggatgaagatagaggtctaatctctagtgtgtagaaataggggc
catgtcaggattggctcttaggctcacaggttttacccagagcaaccctg
acctgttcccatgcagtttttttttttttttttttagggggagggacact
tggacactcaaatctcatgtaaattcgacttgtcttctaggagtgcccaa
cc
gaattcaccaacttgcttctaatatgcaatgtagcctgctatacttggct
atagtgaagattcctgtctcagtgggatgccataactttctcatggtaaa
cccacctattagctagaccattgtgtatgccgttgtttgggtaagactgg
ctactaagtaataagtactaagtaatcactctgcagagtagacctgagct
attctagctgggttctttgtaatgcctaattagtttcactgtctcttcca
agctcctcagcttcaagcattttctaggacattggaacactggtggaggc
ttacctatgtcagaattcaatccttaaacattcagtaaattctctaaact
gaatgctgaaactgtttacagcttaagaaaactaacaaaaaattctaagt
ttgagtcaaaccagcaacactaaatattcagatgcttgttgataatggga
aaatctctactggtgaaaacatatgagaataatacaacccattctcccac
ctacactgcctggtggccataaagtaattagaagtcatgaaaaacagcat
ctacaggatagtggtatggtgctatataatgacaaaattcatttatgttt
ttcaaaacgacctcatatgtgaggttgtcactgttgtgaaaacaaggtca
ttagtaccaaatgccttctctgaggtagtcacactaggaaggcaaatatg
tataaaacatcaatggctgcctcacagtaataagaaaattgtttcattaa
ctcttcactattaaatctcttccatctatattaatgtaatatctaaaacc
aaacacttcatatatatataagaagggagaaatagaaacattaacattgt
ggtgttggcatgacatttaatagaacagtttatgtgaagccttaagcaga
atgtttgctctcctgtgtggaaataatatttagaaattgttttacctcta
gtaaaaaataatatagaataagtccgtgcctctttactgcaagtttacca
aatgtttttgtattcatcttcatgtgggtcagctttcagagattacagat
gggtcatgctggtcacaaagaatacttcttgtggacagataccttctcct
ctctaactctgataccaaaccttaatgttggtagacctcaagtctttcat
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_13423426_13424026
seq2: B6Ng01-251P07.b_43_643

seq1  GAATTCATTATACCACCCCAACAGATTCATTAGAGCCTCAATATTTTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTATACCACCCCAACAGATTCATTAGAGCCTCAATATTTTGCC  50

seq1  CTACATCCAGGCCGTACATCCAGGGTCCCACTAGTACTTTTATTTCTGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATCCAGGCCGTACATCCAGGGTCCCACTAGTACTTTTATTTCTGTC  100

seq1  TATTTTGGCTTCATTTTTTAAAAAATCAAGTGTCCAAAAATGTGTGATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGGCTTCATTTTTTAAAAAATCAAGTGTCCAAAAATGTGTGATTT  150

seq1  TATTTCTGGGCCTTTGATTAGATTCCATCCATCAACCTGTCTTTTTCTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTGGGCCTTTGATTAGATTCCATCCATCAACCTGTCTTTTTCTAT  200

seq1  ACCAATACCATGCAAATTTATGCAATACAGCTATAGATCAGGAATGCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATACCATGCAAATTTATGCAATACAGCTATAGATCAGGAATGCTGA  250

seq1  TACCCCCTAAAGTTCTATTATTGTACAGGATTGTTTTAGATTTCCTGGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCCCTAAAGTTCTATTATTGTACAGGATTGTTTTAGATTTCCTGGGT  300

seq1  TTTCGTTTTTCCATATGAAGTAGAAAATTGTTCTATCATGGTCTGTAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGTTTTTCCATATGAAGTAGAAAATTGTTCTATCATGGTCTGTAAAG  350

seq1  ACGTTTGTTTGGGATTTTCATGGGAATTGTATTGAATTTGTAAATTTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTTGTTTGGGATTTTCATGGGAATTGTATTGAATTTGTAAATTTATT  400

seq1  TTTGTAAGGTGTCCATCAACACTTGCATAACTCATTGCACATGGAGAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAAGGTGTCCATCAACACTTGCATAACTCATTGCACATGGAGAAGT  450

seq1  GAAGCTGGTGTATCTTTGTAACGTTTCTACAGTAAAACACACTCGGACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTGGTGTATCTTTGTAACGTTTCTACAGTAAAACACACTCGGACAA  500

seq1  CCAGGTCTTTCTATGGCAAAGCTTTTTATTGTTTACTTTTCAGGAAGACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTCTTTCTATGGCAAAGCTTTTTATTGTTTACTTTTCAGGAAGACC  550

seq1  TCGAACCCGGAAAATGGAGCTGCTTAAATACCCCTCTGTGTGATGTGTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAACCCGGAAAATGGAGCTGCTTAAATACCCCTCTGTGTGATGTGTCA  600

seq1  G  601
      |
seq2  G  601

seq1: chr19_13550410_13551571
seq2: B6Ng01-251P07.g_63_1213 (reverse)

seq1  TATG-AAGACTTGGAGTCTAACAAACATTAAGTGTTTTGGTTATCAGAGT  49
      |||| ||||||||  |||| || ||||||||| ||||  | |||||||||
seq2  TATGAAAGACTTGAGGTCT-ACCAACATTAAG-GTTT--GGTATCAGAGT  46

seq1  TAGAGA-GAGAA-GTATCCTTGTTCCACAAGAAGGTATCTTTGGTTGACC  97
      |||||| ||||| |||||  || |||||||||||   ||||||  |||||
seq2  TAGAGAGGAGAAGGTATC--TG-TCCACAAGAAGTATTCTTTG--TGACC  91

seq1  AGGCATGGACCCATCTGTAAATTCTTCTGAAAAGCTGACCAACATGAAGA  147
      | |||| |||||||||||||  || |||| |||||||||| |||||||||
seq2  A-GCAT-GACCCATCTGTAA--TC-TCTG-AAAGCTGACCCACATGAAGA  135

seq1  TGAATACAAAACATTTTGGTAAACTTGCAGTAAAGAGGCACGGACTTATT  197
      |||||||||||   ||||||||||||||||||||||||||||||||||||
seq2  TGAATACAAAAACATTTGGTAAACTTGCAGTAAAGAGGCACGGACTTATT  185

seq1  CTATATTA-TTTTTACTAGAGGTAAAACAATTTCTAAATATTATTTCCAC  246
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CTATATTATTTTTTACTAGAGGTAAAACAATTTCTAAATATTATTTCCAC  235

seq1  ACAGGAGAGCAAACATTCTGCTTAAGGCTTCACATAAACTGTTCTATTAA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAGAGCAAACATTCTGCTTAAGGCTTCACATAAACTGTTCTATTAA  285

seq1  ATGTCATGCCAACACCACAATGTTAATGTTTCTATTTCTCCCTTCTTATA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCATGCCAACACCACAATGTTAATGTTTCTATTTCTCCCTTCTTATA  335

seq1  TATATATGAAGTGTTTGGTTTTAGATATTACATTAATATAGATGGAAGAG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATGAAGTGTTTGGTTTTAGATATTACATTAATATAGATGGAAGAG  385

seq1  ATTTAATAGTGAAGAGTTAATGAAACAATTTTCTTATTACTGTGAGGCAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATAGTGAAGAGTTAATGAAACAATTTTCTTATTACTGTGAGGCAG  435

seq1  CCATTGATGTTTTATACATATTTGCCTTCCTAGTGTGACTACCTCAGAGA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGATGTTTTATACATATTTGCCTTCCTAGTGTGACTACCTCAGAGA  485

seq1  AGGCATTTGGTACTAATGACCTTGTTTTCACAACAGTGACAACCTCACAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATTTGGTACTAATGACCTTGTTTTCACAACAGTGACAACCTCACAT  535

seq1  ATGAGGTCGTTTTGAAAAACATAAATGAATTTTGTCATTATATAGCACCA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGTCGTTTTGAAAAACATAAATGAATTTTGTCATTATATAGCACCA  585

seq1  TACCACTATCCTGTAGATGCTGTTTTTCATGACTTCTAATTACTTTATGG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCACTATCCTGTAGATGCTGTTTTTCATGACTTCTAATTACTTTATGG  635

seq1  CCACCAGGCAGTGTAGGTGGGAGAATGGGTTGTATTATTCTCATATGTTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCAGGCAGTGTAGGTGGGAGAATGGGTTGTATTATTCTCATATGTTT  685

seq1  TCACCAGTAGAGATTTTCCCATTATCAACAAGCATCTGAATATTTAGTGT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCAGTAGAGATTTTCCCATTATCAACAAGCATCTGAATATTTAGTGT  735

seq1  TGCTGGTTTGACTCAAACTTAGAATTTTTTGTTAGTTTTCTTAAGCTGTA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGTTTGACTCAAACTTAGAATTTTTTGTTAGTTTTCTTAAGCTGTA  785

seq1  AACAGTTTCAGCATTCAGTTTAGAGAATTTACTGAATGTTTAAGGATTGA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTTCAGCATTCAGTTTAGAGAATTTACTGAATGTTTAAGGATTGA  835

seq1  ATTCTGACATAGGTAAGCCTCCACCAGTGTTCCAATGTCCTAGAAAATGC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGACATAGGTAAGCCTCCACCAGTGTTCCAATGTCCTAGAAAATGC  885

seq1  TTGAAGCTGAGGAGCTTGGAAGAGACAGTGAAACTAATTAGGCATTACAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGCTGAGGAGCTTGGAAGAGACAGTGAAACTAATTAGGCATTACAA  935

seq1  AGAACCCAGCTAGAATAGCTCAGGTCTACTCTGCAGAGTGATTACTTAGT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCCAGCTAGAATAGCTCAGGTCTACTCTGCAGAGTGATTACTTAGT  985

seq1  ACTTATTACTTAGTAGCCAGTCTTACCCAAACAACGGCATACACAATGGT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATTACTTAGTAGCCAGTCTTACCCAAACAACGGCATACACAATGGT  1035

seq1  CTAGCTAATAGGTGGGTTTACCATGAGAAAGTTATGGCATCCCACTGAGA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTAATAGGTGGGTTTACCATGAGAAAGTTATGGCATCCCACTGAGA  1085

seq1  CAGGAATCTTCACTATAGCCAAGTATAGCAGGCTACATTGCATATTAGAA  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAATCTTCACTATAGCCAAGTATAGCAGGCTACATTGCATATTAGAA  1135

seq1  GCAAGTTGGTGAATTC  1162
      ||||||||||||||||
seq2  GCAAGTTGGTGAATTC  1151