BAC Information

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BAC

Clone NameB6Ng01-252H11
Chromosome19 (Build37)
Map Location 13,542,527 - 13,639,633
singlet/doubletdoublet
Overlap geneOlfr1474, Olfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655
Upstream geneDtx4, EG625046, 4632417K18Rik, EG240549, Glyat, Olfr1442, Olfr1443, Keg1, Zfp91, Cntf, Lpxn, EG383436, Olfr1444, Olfr1445, Olfr1446, Olfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451, Olfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1, Olfr1457, EG667271, Olfr1459, Olfr1460-ps1, Olfr1461, Olfr1462, Olfr1463, LOC667300, Olfr1465, Olfr1466, Olfr1467, Olfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472, Olfr1473-ps1
Downstream geneOlfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653, Olfr1487, GA_x5J8B7W6KF8-5425983-5425664, Olfr1489, Olfr1490, Olfr1491, Olfr1492-ps1, Olfr1493-ps1, Olfr1494, Olfr1495, Olfr1496, Olfr1497, Olfr1498-ps1, Olfr1499, Olfr1500, Olfr1501, Olfr1502, Olfr1503-ps1, Olfr1504, Olfr1505, EG667433, Tle4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-252H11.bB6Ng01-252H11.g
ACCGA059454GA059455
length1,0921,049
definitionB6Ng01-252H11.b B6Ng01-252H11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,638,541 - 13,639,633)(13,542,527 - 13,543,574)
sequence
gaattcaggattatattacccatgtcatatccagaaattatcatttaata
gatttccttctcttcctctggcaataatatattttcatttccacttcctg
tgtgttcccagagcctaggtagtgctgatagggttaatatgcatgttcta
tttttatgtgaacactcaatctcttactctcagcaatttgaccaggcatg
aatatctgtgttgaatgttcctgcccattaaaagaagtttttctgacaga
agtttatctctatataccatctttcatttcttttctctactttcactttt
gaattccagtaactatatatgtaacaaaaattttagataatgaataagta
ctatttatttgatctttttcaaatacaatgcaagaagaagagcaatgaga
acaaacatcacattagcgctgagactgataattagactaaaccctaagtg
ttcccataaacagctcgcttctcagtgatagtctgaatttctattcttct
cttttcttaattcctttctcactcctttatccattctgttacccacttcc
aaataaatatatgaactcaaatcacaggcttgaggttagtatctagggac
cttacataattctttagacaaaatctaatgctctttaataggcaaatttt
gcatctgatcaaatttacagtggaaagaattattccaggtcaataagaga
catttttttaaaggaaatgaatggagttttgaggttgatagaaaaaattg
tctttatacttccaaacacaatcacatgtgaaacaacactcaccttcaca
cagaatatgtacctgcacgaatagtagtggactgattgatgagtaaggaa
atcctggaatctgatagttttggaggaaagaagaatctttcctcttttgg
gatattaacactgggtacattgcacatgctctggctcatggctccacacc
tatatacgtattatggaactaaataatttattattattaatgaggatgtc
ataaaatttggtcattctggcagagatctgggggaagaacatacagaatg
gagatggggtggatatggatcactatgttgtatggtttggaa
gaattctatatttgtacaattttcacctagctccccaaactggccactga
catattttcatagtcttgtgtggaattattttaaagaagcaagattctga
gcagactgccattgctttccattttttcaggtgaattctaatacattaag
agctcacaatgaccattctcagagttttgtgtgtatgtgtgaggatgagt
atgaaacaagcaggccaaacatatccagttctcagaaatattattttaaa
tgttaatttttattagatattttcttgatttacatttcaaatgctattcc
atttccttgttttagaaatattagtagagatggttttatcattttttcct
acagatgaagaaactgagctcagaagtaaataatttcaaaatgcacaaaa
ataattatatgtataaaacctgaacccaggattcctagttctctgataat
gatcatatatatatatatatatatgctcttttagctagtgatttggtaat
ggataactaattcgtgtacttttcccagaaaagataatttctcccactct
cagcactacttagttgccagtaattaattttttatgaggttgggtcctca
cagtctttgactctttactttgatatgcctgctgttgttgttcttgttca
gttcatatttggcagtcatattgagtgtttatggttataaattcgagact
taaagagaaaaaagcattagctataactgtactatgaaataagtccattt
tagttgaaaaaaaatgtatggtgagtattttaaataaatacaaaagaaaa
ctttggatattttcactactggaaaatgttaaattatatggaaaatacaa
atttccctgatttacccagagctaatacacacacacacacaaacacacac
acacacatgtatgtgtgtgtatgcatatacatatatgtacatacatacat
atatatatatatatatatatatttgtgtgtatataaatacatatgtgtgt
gtacataaaatatacatgtgtgtgtttgtgtgtggtgtaatatgtgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_13638541_13639633
seq2: B6Ng01-252H11.b_45_1136 (reverse)

seq1  TTCAAAACCATACACAATAATTTATCATATCCACCCCATTCTTCCATTCT  50
      ||| ||||||||||  ||| |    ||||||||||||||   ||||||||
seq2  TTCCAAACCATACAACATAGTGATCCATATCCACCCCAT--CTCCATTCT  48

seq1  GTATG-TCT--CCCCAGATCTCTGCCAGAATGACCAAATTTTATGACATC  97
      ||||| |||  |||||||||||||||||||||||||||||||||||||||
seq2  GTATGTTCTTCCCCCAGATCTCTGCCAGAATGACCAAATTTTATGACATC  98

seq1  TTCCATTAATTATAATAAATTTATTTAGTTCCTATAATACGTATATAGGT  147
       | ||||||| |||||||| |||||||||||| |||||||||||||||||
seq2  CT-CATTAATAATAATAAA-TTATTTAGTTCC-ATAATACGTATATAGGT  145

seq1  GTGGAGCCATGAGCCAGAGCATGTGCAATGTACCCAGTGTTAATAT-CCA  196
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GTGGAGCCATGAGCCAGAGCATGTGCAATGTACCCAGTGTTAATATCCCA  195

seq1  AAAGAGGAAAGATTCTTCTTTCCTCCAAAACTATCAGATTCCAGGATTTC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGGAAAGATTCTTCTTTCCTCCAAAACTATCAGATTCCAGGATTTC  245

seq1  CTTACTCATCAATCAGTCCACTACTATTCGTGCAGGTACATATTCTGTGT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTCATCAATCAGTCCACTACTATTCGTGCAGGTACATATTCTGTGT  295

seq1  GAAGGTGAGTGTTGTTTCACATGTGATTGTGTTTGGAAGTATAAAGACAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTGAGTGTTGTTTCACATGTGATTGTGTTTGGAAGTATAAAGACAA  345

seq1  TTTTTTCTATCAACCTCAAAACTCCATTCATTTCCTTTAAAAAAATGTCT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTATCAACCTCAAAACTCCATTCATTTCCTTTAAAAAAATGTCT  395

seq1  CTTATTGACCTGGAATAATTCTTTCCACTGTAAATTTGATCAGATGCAAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTGACCTGGAATAATTCTTTCCACTGTAAATTTGATCAGATGCAAA  445

seq1  ATTTGCCTATTAAAGAGCATTAGATTTTGTCTAAAGAATTATGTAAGGTC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCCTATTAAAGAGCATTAGATTTTGTCTAAAGAATTATGTAAGGTC  495

seq1  CCTAGATACTAACCTCAAGCCTGTGATTTGAGTTCATATATTTATTTGGA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGATACTAACCTCAAGCCTGTGATTTGAGTTCATATATTTATTTGGA  545

seq1  AGTGGGTAACAGAATGGATAAAGGAGTGAGAAAGGAATTAAGAAAAGAGA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGTAACAGAATGGATAAAGGAGTGAGAAAGGAATTAAGAAAAGAGA  595

seq1  AGAATAGAAATTCAGACTATCACTGAGAAGCGAGCTGTTTATGGGAACAC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAGAAATTCAGACTATCACTGAGAAGCGAGCTGTTTATGGGAACAC  645

seq1  TTAGGGTTTAGTCTAATTATCAGTCTCAGCGCTAATGTGATGTTTGTTCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGTTTAGTCTAATTATCAGTCTCAGCGCTAATGTGATGTTTGTTCT  695

seq1  CATTGCTCTTCTTCTTGCATTGTATTTGAAAAAGATCAAATAAATAGTAC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCTCTTCTTCTTGCATTGTATTTGAAAAAGATCAAATAAATAGTAC  745

seq1  TTATTCATTATCTAAAATTTTTGTTACATATATAGTTACTGGAATTCAAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCATTATCTAAAATTTTTGTTACATATATAGTTACTGGAATTCAAA  795

seq1  AGTGAAAGTAGAGAAAAGAAATGAAAGATGGTATATAGAGATAAACTTCT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAAGTAGAGAAAAGAAATGAAAGATGGTATATAGAGATAAACTTCT  845

seq1  GTCAGAAAAACTTCTTTTAATGGGCAGGAACATTCAACACAGATATTCAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAAAAACTTCTTTTAATGGGCAGGAACATTCAACACAGATATTCAT  895

seq1  GCCTGGTCAAATTGCTGAGAGTAAGAGATTGAGTGTTCACATAAAAATAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGTCAAATTGCTGAGAGTAAGAGATTGAGTGTTCACATAAAAATAG  945

seq1  AACATGCATATTAACCCTATCAGCACTACCTAGGCTCTGGGAACACACAG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGCATATTAACCCTATCAGCACTACCTAGGCTCTGGGAACACACAG  995

seq1  GAAGTGGAAATGAAAATATATTATTGCCAGAGGAAGAGAAGGAAATCTAT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGGAAATGAAAATATATTATTGCCAGAGGAAGAGAAGGAAATCTAT  1045

seq1  TAAATGATAATTTCTGGATATGACATGGGTAATATAATCCTGAATTC  1093
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGATAATTTCTGGATATGACATGGGTAATATAATCCTGAATTC  1092

seq1: chr19_13542527_13543574
seq2: B6Ng01-252H11.g_63_1111

seq1  GAATTCTATATTTGTACAATTTTCACCTAGCTCCCCAAACTGGCCACTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATATTTGTACAATTTTCACCTAGCTCCCCAAACTGGCCACTGA  50

seq1  CATATTTTCATAGTCTTGTGTGGAATTATTTTAAAGAAGCAAGATTCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTTCATAGTCTTGTGTGGAATTATTTTAAAGAAGCAAGATTCTGA  100

seq1  GCAGACTGCCATTGCTTTCCATTTTTTCAGGTGAATTCTAATACATTAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACTGCCATTGCTTTCCATTTTTTCAGGTGAATTCTAATACATTAAG  150

seq1  AGCTCACAATGACCATTCTCAGAGTTTTGTGTGTATGTGTGAGGATGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCACAATGACCATTCTCAGAGTTTTGTGTGTATGTGTGAGGATGAGT  200

seq1  ATGAAACAAGCAGGCCAAACATATCCAGTTCTCAGAAATATTATTTTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAACAAGCAGGCCAAACATATCCAGTTCTCAGAAATATTATTTTAAA  250

seq1  TGTTAATTTTTATTAGATATTTTCTTGATTTACATTTCAAATGCTATTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAATTTTTATTAGATATTTTCTTGATTTACATTTCAAATGCTATTCC  300

seq1  ATTTCCTTGTTTTAGAAATATTAGTAGAGATGGTTTTATCATTTTTTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTTGTTTTAGAAATATTAGTAGAGATGGTTTTATCATTTTTTCCT  350

seq1  ACAGATGAAGAAACTGAGCTCAGAAGTAAATAATTTCAAAATGCACAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATGAAGAAACTGAGCTCAGAAGTAAATAATTTCAAAATGCACAAAA  400

seq1  ATAATTATATGTATAAAACCTGAACCCAGGATTCCTAGTTCTCTGATAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTATATGTATAAAACCTGAACCCAGGATTCCTAGTTCTCTGATAAT  450

seq1  GATCATATATATATATATATATATGCTCTTTTAGCTAGTGATTTGGTAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATATATATATATATATATATGCTCTTTTAGCTAGTGATTTGGTAAT  500

seq1  GGATAACTAATTCGTGTACTTTTCCCAGAAAAGATAATTTCTCCCACTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAACTAATTCGTGTACTTTTCCCAGAAAAGATAATTTCTCCCACTCT  550

seq1  CAGCACTACTTAGTTGCCAGTAATTAATTTTTTATGAGGTTGGGTCCTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACTACTTAGTTGCCAGTAATTAATTTTTTATGAGGTTGGGTCCTCA  600

seq1  CAGTCTTTGACTCTTTACTTTGATATGCCTGCTGTTGTTGTTCTTGTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTTTGACTCTTTACTTTGATATGCCTGCTGTTGTTGTTCTTGTTCA  650

seq1  GTTCATATTTGGCAGTCATATTGAGTGTTTATGGTTATAAATTCGAGACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATATTTGGCAGTCATATTGAGTGTTTATGGTTATAAATTCGAGACT  700

seq1  TAAAGAGAAAAAAGCATTAGCTATAACTGTACTATGAAATAAGTCCATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAGAAAAAAGCATTAGCTATAACTGTACTATGAAATAAGTCCATTT  750

seq1  TAGTTGAAAAAAAATGTATGGTGAGTATTTTAAATAAATACAAAAGAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGAAAAAAAATGTATGGTGAGTATTTTAAATAAATACAAAAGAAAA  800

seq1  CTTTGGATATTTTCACTACTGGAAAATGTTAAATTATATGGAAAATACAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGATATTTTCACTACTGGAAAATGTTAAATTATATGGAAAATACAA  850

seq1  ATTTCCCTGATTTACCCAGAGCTAATACACACACACACACAAACACACAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCCTGATTTACCCAGAGCTAATACACACACACACACAAACACACAC  900

seq1  ACACACATGTATGTGTGTGTATGCATATACATATATGTACATACATACAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACATGTATGTGTGTGTATGCATATACATATATGTACATACATACAT  950

seq1  ATATATATATATATATATATATTTGTGTGTATATAAATACATATGTGTGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATTTGTGTGTATATAAATACATATGTGTGT  1000

seq1  GTAACATAAAATATACATGTGTGTGTTTGTGTGT-GTGT-ATATGTGTGA  1048
      || ||||||||||||||||||||||||||||||| |||| ||||||||||
seq2  GT-ACATAAAATATACATGTGTGTGTTTGTGTGTGGTGTAATATGTGTGA  1049