BAC Information

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BAC

Clone NameB6Ng01-253K10
Chromosome19 (Build37)
Map Location 14,311,833 - 14,521,928
singlet/doubletdoublet
Overlap geneEG667433
Upstream geneLOC667300, Olfr1465, Olfr1466, Olfr1467, Olfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472, Olfr1473-ps1, Olfr1474, Olfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655, Olfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653, Olfr1487, GA_x5J8B7W6KF8-5425983-5425664, Olfr1489, Olfr1490, Olfr1491, Olfr1492-ps1, Olfr1493-ps1, Olfr1494, Olfr1495, Olfr1496, Olfr1497, Olfr1498-ps1, Olfr1499, Olfr1500, Olfr1501, Olfr1502, Olfr1503-ps1, Olfr1504, Olfr1505
Downstream geneTle4, EG433225, EG635497, Pomc-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-253K10.bB6Ng01-253K10.g
ACCGA060326GA060327
length1,0811,050
definitionB6Ng01-253K10.b B6Ng01-253K10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,520,853 - 14,521,928)(14,311,833 - 14,312,892)
sequence
gaattccagcgttattcacccatgtagaccaaatcagcaagtccagtgag
atgccataagctggctgcattgcaggatggtatgcaaatccactgaagct
gctgagaaataagagatcatttcttaagatagtaagtgactatccataga
gatcaactcgaggtggggagacactctttgttgggcgtggaaggaataat
ggatatagagagggccttgaacttctgttagttactcgtcggcatggttc
tgacaacatagaaagtcagaaggaaaaaacacgtttgcacatcagaaaac
acaacttatatgtctggtagggttacccagagaggcacagagaattggct
ttataaactgactctgtggcagttgttgtcgatagataatgctgagagct
tatccattccccagtactgggcttataagagtatatttttcttatctctg
tgacagaacacctggtggaaacaatttaagggaggatagttgggttgggg
ggcagaggggcaggcgaattgttcggttgcttttttgctcactgttacag
agctatttcagtccagcagaaaaggcatggtaacagtattggctccattt
gtgattgcaggcagaggctttaatcacatggtgctgactgggaagcacag
ttcacagactggaaccaggggcagtaaaacctccagagacccccacccct
agtgacctctagtgactactgctaggcctcttaaaagctccactgcctcc
cccaaataatactactagctggggaataaggtctagaaatcaagaggcat
acctgtataagttgggaggcctgtcttaatgtacacagaagttttgccat
aattattgaactttaaaggtaattttaagggtctgggacttattgcctct
tggtgttggcaagttgctgatgatctgatacctctggaaaagaaggaaaa
taaggtaatactgaaaagtcagttgctgctttcaccataattatgctctt
tgtatagttctttgccagagtccgaagaacagaaagagggcatctctctc
taagcagagaaaattgaatggggaaccgagt
gaattccaggaaagccagtgctacacagagaaaccctgtctcaaaaaact
caaaaaaaaaaaaaaaaagaaagaaaaagaaagaaaagaaaaaaaatagg
aataaacaaaacttttttaaatttttaaatattcacatttcttaattcac
atttcttaatttattatatttaaagtatctttatatctactcaaaaagag
gttcagcaactaagtagccttttcttactatactgttggttttgtgttaa
aatttcttgttaaattataatttgtaaccttacattgatgaattcgatca
cccacacaccacaaagacccaaacctcaatgtaagccaagatctgtgttc
aaattctgcccatttttacctcttttgataaaaaagtattatctggatct
ttaaaggttggattggggtggggaggtcagtttgaaagccaaaagcaaag
gaagtatattctttcctctaagaatctgaccgttctccatcttttctgta
tcagtgtttacaaagtttttaagatagacttcaactcttcaactcttaag
cagagatgaagtgatgcctctgcaattctaactttccaggataccacctt
atgtctaacaatatattcaaaactgcctactgtgcaggtcagaatcgaca
aaataactacagggagctgaaaaggagtcttcaaatggcaaaaatatagg
tgaattgtctttgttacagaagagaatatggcctacaaaaatgaagtcta
tagaataggccagggaagctaggtagaacttgacaatccaaccaggcagt
ggtaggaaacttgacatgaaggtcaaagacacctgagtatctcttgtgaa
ggaaattagaggtacagaacactgtacgcacattttctgtaagtaagctg
aggtgtgcctgtgggtggccaaatactaaattaagcatgtagactgagcc
cgagagacttagatcctgggacttcactgtaatttttagcatttgtaatt
ttttagtgtgatctgcttttatttacctctccccctttccactgagtgtg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_14520853_14521928
seq2: B6Ng01-253K10.b_46_1126 (reverse)

seq1  ACTCTGTTCTCCCATTCTAAATTTTCTCTTGCTTTGGAGAGAGATG-CCT  49
      |||| |||| |||||||  ||||||||| ||| || |||||||||| |||
seq2  ACTCGGTTC-CCCATTC--AATTTTCTC-TGC-TTAGAGAGAGATGCCCT  45

seq1  CTTCTTTGTTCTTCGGACTCTG--CAAGAACTATACAAAGAGCATAATTT  97
      ||| | ||||||||||||||||   |||||||||||||||||||||| ||
seq2  CTT-TCTGTTCTTCGGACTCTGGCAAAGAACTATACAAAGAGCATAA-TT  93

seq1  ATGGTGAAAGCAGCAACTGAC-TTTCAGTAATTACTTATTTTCCTTCTTT  146
      ||||||||||||||||||||| |||||||| |  ||||||||||||||||
seq2  ATGGTGAAAGCAGCAACTGACTTTTCAGTATTACCTTATTTTCCTTCTTT  143

seq1  T-CAGAGGTATCAGATCATCAGC-ACTTGCC-ACACC-AGAGGCA--TAG  190
      | ||||||||||||||||||||| ||||||| ||||| |||||||   ||
seq2  TCCAGAGGTATCAGATCATCAGCAACTTGCCAACACCAAGAGGCAATAAG  193

seq1  TCCCAGACCCTTAAAATTACCTTTATAGTTCAATAATTATGGCAAAACTT  240
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TCCCAGACCCTTAAAATTACCTTTAAAGTTCAATAATTATGGCAAAACTT  243

seq1  CTGTGTACATTAAGACAGGCCT-CCAACTTATACAGGTATGCCTCTTGA-  288
      |||||||||||||||||||||| |||||||||||||||||||||||||| 
seq2  CTGTGTACATTAAGACAGGCCTCCCAACTTATACAGGTATGCCTCTTGAT  293

seq1  TTCTAGACCTTATTCCCCAGCTAGTAGTATTATTTGGGGGAGGCAGTGGA  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGACCTTATTCCCCAGCTAGTAGTATTATTTGGGGGAGGCAGTGGA  343

seq1  GCTTTTAAGAGGCCTAGCAGTAGTCACTAGAGGTCACTAGGGGTGGGGGT  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTAAGAGGCCTAGCAGTAGTCACTAGAGGTCACTAGGGGTGGGGGT  393

seq1  CTCTGGAGGTTTTACTGCCCCTGGTTCCAGTCTGTGAACTGTGCTTCCCA  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGAGGTTTTACTGCCCCTGGTTCCAGTCTGTGAACTGTGCTTCCCA  443

seq1  GTCAGCACCATGTGATTAAAGCCTCTGCCTGCAATCACAAATGGAGCCAA  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGCACCATGTGATTAAAGCCTCTGCCTGCAATCACAAATGGAGCCAA  493

seq1  TACTGTTACCATGCCTTTTCTGCTGGACTGAAATAGCTCTGTAACAGTGA  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTTACCATGCCTTTTCTGCTGGACTGAAATAGCTCTGTAACAGTGA  543

seq1  GCAAAAAAGCAACCGAACAATTCGCCTGCCCCTCTGCCCCCCAACCCAAC  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAAAGCAACCGAACAATTCGCCTGCCCCTCTGCCCCCCAACCCAAC  593

seq1  TATCCTCCCTTAAATTGTTTCCACCAGGTGTTCTGTCACAGAGATAAGAA  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTCCCTTAAATTGTTTCCACCAGGTGTTCTGTCACAGAGATAAGAA  643

seq1  AAATATACTCTTATAAGCCCAGTACTGGGGAATGGATAAGCTCTCAGCAT  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATACTCTTATAAGCCCAGTACTGGGGAATGGATAAGCTCTCAGCAT  693

seq1  TATCTATCGACAACAACTGCCACAGAGTCAGTTTATAAAGCCAATTCTCT  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTATCGACAACAACTGCCACAGAGTCAGTTTATAAAGCCAATTCTCT  743

seq1  GTGCCTCTCTGGGTAACCCTACCAGACATATAAGTTGTGTTTTCTGATGT  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTCTCTGGGTAACCCTACCAGACATATAAGTTGTGTTTTCTGATGT  793

seq1  GCAAACGTGTTTTTTCCTTCTGACTTTCTATGTTGTCAGAACCATGCCGA  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACGTGTTTTTTCCTTCTGACTTTCTATGTTGTCAGAACCATGCCGA  843

seq1  CGAGTAACTAACAGAAGTTCAAGGCCCTCTCTATATCCATTATTCCTTCC  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTAACTAACAGAAGTTCAAGGCCCTCTCTATATCCATTATTCCTTCC  893

seq1  ACGCCCAACAAAGAGTGTCTCCCCACCTCGAGTTGATCTCTATGGATAGT  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCCCAACAAAGAGTGTCTCCCCACCTCGAGTTGATCTCTATGGATAGT  943

seq1  CACTTACTATCTTAAGAAATGATCTCTTATTTCTCAGCAGCTTCAGTGGA  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTACTATCTTAAGAAATGATCTCTTATTTCTCAGCAGCTTCAGTGGA  993

seq1  TTTGCATACCATCCTGCAATGCAGCCAGCTTATGGCATCTCACTGGACTT  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATACCATCCTGCAATGCAGCCAGCTTATGGCATCTCACTGGACTT  1043

seq1  GCTGATTTGGTCTACATGGGTGAATAACGCTGGAATTC  1076
      ||||||||||||||||||||||||||||||||||||||
seq2  GCTGATTTGGTCTACATGGGTGAATAACGCTGGAATTC  1081

seq1: chr19_14311833_14312892
seq2: B6Ng01-253K10.g_63_1112

seq1  GAATTCCAGGAAAGCCAGTGCTACACAGAGAAACCCTGTCTCAAAAAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGAAAGCCAGTGCTACACAGAGAAACCCTGTCTCAAAAAACT  50

seq1  CAAAAAAAAAAAAAAAAAGAAAGAAAAAGAAAGAAAAGAAAAAAAATAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAAAAAAAAAAAAGAAAGAAAAAGAAAGAAAAGAAAAAAAATAGG  100

seq1  AATAAACAAAACTTTTTTAAATTTTTAAATATTCACATTTCTTAATTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAACAAAACTTTTTTAAATTTTTAAATATTCACATTTCTTAATTCAC  150

seq1  ATTTCTTAATTTATTATATTTAAAGTATCTTTATATCTACTCAAAAAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTAATTTATTATATTTAAAGTATCTTTATATCTACTCAAAAAGAG  200

seq1  GTTCAGCAACTAAGTAGCCTTTTCTTACTATACTGTTGGTTTTGTGTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGCAACTAAGTAGCCTTTTCTTACTATACTGTTGGTTTTGTGTTAA  250

seq1  AATTTCTTGTTAAATTATAATTTGTAACCTTACATTGATGAATTCGATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTTGTTAAATTATAATTTGTAACCTTACATTGATGAATTCGATCA  300

seq1  CCCACACACCACAAAGACCCAAACCTCAATGTAAGCCAAGATCTGTGTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACACACCACAAAGACCCAAACCTCAATGTAAGCCAAGATCTGTGTTC  350

seq1  AAATTCTGCCCATTTTTACCTCTTTTGATAAAAAAGTATTATCTGGATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTGCCCATTTTTACCTCTTTTGATAAAAAAGTATTATCTGGATCT  400

seq1  TTAAAGGTTGGATTGGGGTGGGGAGGTCAGTTTGAAAGCCAAAAGCAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGGTTGGATTGGGGTGGGGAGGTCAGTTTGAAAGCCAAAAGCAAAG  450

seq1  GAAGTATATTCTTTCCTCTAAGAATCTGACCGTTCTCCATCTTTTCTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTATATTCTTTCCTCTAAGAATCTGACCGTTCTCCATCTTTTCTGTA  500

seq1  TCAGTGTTTACAAAGTTTTTAAGATAGACTTCAACTCTTCAACTCTTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGTTTACAAAGTTTTTAAGATAGACTTCAACTCTTCAACTCTTAAG  550

seq1  CAGAGATGAAGTGATGCCTCTGCAATTCTAACTTTCCAGGATACCACCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGATGAAGTGATGCCTCTGCAATTCTAACTTTCCAGGATACCACCTT  600

seq1  ATGTCTAACAATATATTCAAAACTGCCTACTGTGCAGGTCAGAATCGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTAACAATATATTCAAAACTGCCTACTGTGCAGGTCAGAATCGACA  650

seq1  AAATAACTACAGGGAGCTGAAAAGGAGTCTTCAAATGGCAAAAATATAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACTACAGGGAGCTGAAAAGGAGTCTTCAAATGGCAAAAATATAGG  700

seq1  TGAATTGTCTTTGTTACAGAAGAGAATATGGCCTACAAAAATGAAGTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTGTCTTTGTTACAGAAGAGAATATGGCCTACAAAAATGAAGTCTA  750

seq1  TAGAATAGGCCAGGGAAGCTAGGTAGAACTTGACAATCCAACCAGGCAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATAGGCCAGGGAAGCTAGGTAGAACTTGACAATCCAACCAGGCAGT  800

seq1  GGTAGGAAACTTGACATGAAGGTCAAAGACACCTGAGTATCTCCTTGTGA  850
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GGTAGGAAACTTGACATGAAGGTCAAAGACACCTGAGTATCT-CTTGTGA  849

seq1  AGGAAATTAAGAGGTACAGAAACACTGTACGCACATTTTCTGTAAGTAAG  900
      |||||||| |||||||||| ||||||||||||||||||||||||||||||
seq2  AGGAAATT-AGAGGTACAG-AACACTGTACGCACATTTTCTGTAAGTAAG  897

seq1  CTGAGGTGTGCCTGTGGGTGGCCAAATACTAAATTAAGCAATGTAGACTG  950
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTGAGGTGTGCCTGTGGGTGGCCAAATACTAAATTAAGC-ATGTAGACTG  946

seq1  AGCCCCGAGAGAC-TAGATCCTGGGACTTCCACTGTAATATTTTTAGCAA  999
      || |||||||||| ||||||||||||||| |||||||  ||||||||| |
seq2  AG-CCCGAGAGACTTAGATCCTGGGACTT-CACTGTA--ATTTTTAGC-A  991

seq1  TTTGTAATTTTTTAAGTGTGATCTGCTTTTTAATTTA-CTCTCCCCTTTC  1048
      ||||||||||||| ||||||||||||||||  ||||| |||||||| || 
seq2  TTTGTAATTTTTT-AGTGTGATCTGCTTTT--ATTTACCTCTCCCCCTTT  1038

seq1  CCACTGTGTGTG  1060
      |||||| |||||
seq2  CCACTGAGTGTG  1050