BAC Information

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BAC

Clone NameB6Ng01-253L19
Chromosome19 (Build37)
Map Location 49,114,772 - 49,115,837
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC670576, Sorcs3, LOC100042896
Downstream geneLOC629448, Siah1-ps1, EG433251
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-253L19.bB6Ng01-253L19.g
ACCGA060388GA060389
length9991,102
definitionB6Ng01-253L19.b B6Ng01-253L19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagagatcagcatgcctctttctcctgagtgctgaaattaaaggt
gtgagccactccatctggacctaagtcattcttttttttaaattttttat
taggtattttcctcatttacatttccaatgctatcccaaaagtcccccat
accaaccaccccactcccctacccacaaactccccccttttggccctggc
attcccctgtactggggcatataaagtttgcaagtccaatgggcctctct
ttccagtgatggcctactaggtcatcttttgatacatacgcagctagact
aaagagctctggggtactggtgagttcataatgttgttctacctataggg
ttgcagatccctttagctctttgggtactttctgtagctcctccattggg
ggccctgtgatccatccactgtgagcatccacttctgtgtttgctaggcc
ctggcatagtctcacaagagacagctatatctgggtcctttcagcaaaat
attgctagtgtatgcaatggtgtcagcatttggaagctgattatgggatg
gatccccggatatggaactcactagatggtccatcctttcgtcagagctc
caaattttgtctctgtaactccttccatgggtgttttgttcccaattcta
agaaggggcaaagtgtccacactttggtctttgttcttcttgagttcatg
tgtttaggaaattgtatcttatatcgtgggtatcctaagtttctgggcta
atatccacttatcagtgagtacatattgtgtgagttcctttgtgattggg
caacctcaatcaggatgatgccctccaggtccatcaatttgtctaggaat
ttcataaattcattctttttaatagctgagtagtactccattgtgtaaat
gtaccacattttctgtatccattcctctgttgaggggcatctgggttctt
tccagcttatggctattataaataatgctgctatgaacatagtgagcat
gaattcagccttaaaataaaataaataagcaaggctcaaagacagataga
ccactggatatagaaggctcaagccagtccctcctttccaacatcccttt
tatacttcaggcacttgatgaattcataattatcccccaggcctttctca
gacttccttgctctgttctccttattaccctcatttcttatgttatggat
atgtatgtataagagaggagagagagagagacagagagagagagagacgg
agacagagacagaaagactcagagagagacagagacagagagagacagac
agagacagagacagagagacagagagagacatacagagacagagacagag
acagagagagagagagaaagagagagagagacagagacagagacagagac
agagacagagacagagtaaaaactaaaggctaatgtgttgatgacttagt
ccatagatggaattacagttcggagatggtatcatgaagactatgacctt
atcagtccatctatcagctcataatctgatagccttttgagaaattgagc
ttttgaggcttttgaggcttttgaggctgagctttcttagaagaagcagc
tcacgggactccatcatttgaaaactaatctggtttctgatggcctccct
gctacaccccattccctgccctccctcccttgcatcttggttgtaatgga
gtcagtttctacttctttctcccgatttttttttttttttgttacaggct
taagagtaaagaagctatatagccatgtatggaaaactgaaatcaggagc
caaaaatagatcctttccactcttacaaagctttctttcttgaacattca
gggacaagcatcacaaaagtctgaccaaaacagcctgcatcttttttcaa
ctactgccactgtgccccaaaggctctctgatgccttggaaatgactttg
gtacagcagacttctaataatgaaattcccagtcaacctttagtagtaag
aaatcatggaatttgttccatctatgatttgacgcaccacttgcctgggt
cctcctgggtaatttatcacagtgttaagggaaccaatggatcaatgtgt
ac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_49114772_49115837
seq2: B6Ng01-253L19.g_62_1163 (reverse)

seq1  GTACACAATGATCCA-TGGTT-CCTAACCACTGTGATAAAT--ACCAGGA  46
      ||||||| ||||||| ||||| ||| | |||||||||||||   ||||||
seq2  GTACACATTGATCCATTGGTTCCCTTAACACTGTGATAAATTACCCAGGA  50

seq1  G--ACCAGGCAAGT-GTGCGTC-AATCATAGAT-GAACAA--TTCATGAT  89
      |   |||||||||| ||||||| |||||||||| ||||||  | ||||||
seq2  GGACCCAGGCAAGTGGTGCGTCAAATCATAGATGGAACAAATTCCATGAT  100

seq1  TTC-TACTACTAA--GGTGACT-GGAATTTCAT--ATAG-AGTCTGCTGT  132
      ||| |||||||||  | ||||| ||||||||||   ||| ||||||||||
seq2  TTCTTACTACTAAAGGTTGACTGGGAATTTCATTATTAGAAGTCTGCTGT  150

seq1  A-CAAAGTCA-TTCCAA-GCATCAGAGAGCC-TTGGGGCACAGTGGCAGT  178
      | |||||||| |||||| ||||||||||||| ||||||||||||||||||
seq2  ACCAAAGTCATTTCCAAGGCATCAGAGAGCCTTTGGGGCACAGTGGCAGT  200

seq1  AGTTG-AAAAAGATGCA-GCTG-TTTGGTCAGAC-TTTGTGATGC-TGT-  222
      ||||| ||||||||||| |||| ||||||||||| |||||||||| ||| 
seq2  AGTTGAAAAAAGATGCAGGCTGTTTTGGTCAGACTTTTGTGATGCTTGTC  250

seq1  CCTGAATGT--CAGAA--GAAGCTTTGTAAGAGTGG-AAGGATCTA-TTT  266
      |||||||||   ||||   ||||||||||||||||| ||||||||| |||
seq2  CCTGAATGTTCAAGAAAGAAAGCTTTGTAAGAGTGGAAAGGATCTATTTT  300

seq1  TGGCTCCTGATTTCAGTTTTCCATACATGGCTATATAGCTTCTTTACTCT  316
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCCTGATTTCAGTTTTCCATACATGGCTATATAGCTTCTTTACTCT  350

seq1  TAAGCCTGTAAC--AAAAAAAAAAAAATCGGGAGAAAGAAGTAGAAACTG  364
      ||||||||||||  ||||||||||||||||||||||||||||||||||||
seq2  TAAGCCTGTAACAAAAAAAAAAAAAAATCGGGAGAAAGAAGTAGAAACTG  400

seq1  ACTCCATTACAACCAAGATGCAAGGGAGGGAGGGCAGGGAATGGGGTGTA  414
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCATTACAACCAAGATGCAAGGGAGGGAGGGCAGGGAATGGGGTGTA  450

seq1  GCAGGGAGGCCATCAGAAACCAGATTAGTTTTCAAATGATGGAGTCCCGT  464
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGAGGCCATCAGAAACCAGATTAGTTTTCAAATGATGGAGTCCCGT  500

seq1  GAGCTGCTTCTTCTAAGAAAGCTCAGCCTCAAAAGCCTCAAAAGCCTCAA  514
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGCTTCTTCTAAGAAAGCTCAGCCTCAAAAGCCTCAAAAGCCTCAA  550

seq1  AAGCTCAATTTCTCAAAAGGCTATCAGATTATGAGCTGATAGATGGACTG  564
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCAATTTCTCAAAAGGCTATCAGATTATGAGCTGATAGATGGACTG  600

seq1  ATAAGGTCATAGTCTTCATGATACCATCTCCGAACTGTAATTCCATCTAT  614
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGTCATAGTCTTCATGATACCATCTCCGAACTGTAATTCCATCTAT  650

seq1  GGACTAAGTCATCAACACATTAGCCTTTAGTTTTTACTCTGTCTCTGTCT  664
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTAAGTCATCAACACATTAGCCTTTAGTTTTTACTCTGTCTCTGTCT  700

seq1  CTGTCTCTGTCTCTGTCTCTGTCTCTCTCTCTCTTTCTCTCTCTCTCTCT  714
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCTGTCTCTGTCTCTGTCTCTCTCTCTCTTTCTCTCTCTCTCTCT  750

seq1  GTCTCTGTCTCTGTCTCTGTATGTCTCTCTCTGTCTCTCTGTCTCTGTCT  764
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGTCTCTGTCTCTGTATGTCTCTCTCTGTCTCTCTGTCTCTGTCT  800

seq1  CTGTCTGTCTCTCTCTGTCTCTGTCTCTCTCTGAGTCTTTCTGTCTCTGT  814
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTGTCTCTCTCTGTCTCTGTCTCTCTCTGAGTCTTTCTGTCTCTGT  850

seq1  CTCCGTCTCTCTCTCTCTCTGTCTCTCTCTCTCTCCTCTCTTATACATAC  864
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCGTCTCTCTCTCTCTCTGTCTCTCTCTCTCTCCTCTCTTATACATAC  900

seq1  ATATCCATAACATAAGAAATGAGGGTAATAAGGAGAACAGAGCAAGGAAG  914
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCATAACATAAGAAATGAGGGTAATAAGGAGAACAGAGCAAGGAAG  950

seq1  TCTGAGAAAGGCCTGGGGGATAATTATGAATTCATCAAGTGCCTGAAGTA  964
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGAAAGGCCTGGGGGATAATTATGAATTCATCAAGTGCCTGAAGTA  1000

seq1  TAAAAGGGATGTTGGAAAGGAGGGACTGGCTTGAGCCTTCTATATCCAGT  1014
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGGGATGTTGGAAAGGAGGGACTGGCTTGAGCCTTCTATATCCAGT  1050

seq1  GGTCTATCTGTCTTTGAGCCTTGCTTATTTATTTTATTTTAAGGCTGAAT  1064
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTATCTGTCTTTGAGCCTTGCTTATTTATTTTATTTTAAGGCTGAAT  1100

seq1  TC  1066
      ||
seq2  TC  1102