BAC Information

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BAC

Clone NameB6Ng01-258H05
Chromosome19 (Build37)
Map Location 43,265,452 - 43,266,479
singlet/doubletsinglet
Overlap geneLOC545291
Upstream geneZfyve27, Sfrp5, 4933417O08Rik, Crtac1, D19Ertd386e, Loxl4, 4833409A17Rik, Hps1
Downstream geneEG627624, Cnnm1, Got1, Nkx2-3, LOC100042700, LOC100043245, Slc25a28, Entpd7, Cox15, Cutc, Abcc2, Dnmbp, LOC668408, Cpn1, Cyp2c44, Erlin1, Chuk, Cwf19l1, Bloc1s2, Pkd2l1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258H05.bB6Ng01-258H05.g
ACCGA063886GA063887
length1,0271,146
definitionB6Ng01-258H05.b B6Ng01-258H05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcggtctctaggattcaaatcacagttttaaaaatgtaccacaa
agctatgtggttggtccttacctcctactctagcctcgctggcctcccac
tctgacctggctcttactgctcttttgttattatcagtgacttcatttta
ctgttttgaaaagatggagtttgagtttatatagagtttctcattagctc
ttcttggtcttgaaatttcttcatgagattctgatgtggctgtgttctaa
ttccttctttgccaatgtgttaaaaaggattgttctggtcatgtgtgcaa
aataccagtcttcactctgacctcagcacgctctcttcccaagactattt
ctcttcacattgttatttaggtgtttgtccattaattctatattaccccc
catttgaatgtagggtaattaatttgttgttatatccttggaggctttgt
gttatagagagccactgaattactgaagaaattagatgacattaatatgg
acagacatttgaaaggagaggctaggggttgttattccctatatgtgtgc
tggttaggttatgacaatttgccacatgttagtgtcacctgaggaaaggg
aacctcctcacctgagaaatgcctgcaggcaagtctgtgggaattatttc
tttgattaatggtaactatgagagcacccaagctcactatggtcagtgcc
attcctggacaggtacaatttaataaaagaaactgaacaagccaggaaca
accagtcagtaagcaacacttctttatggctctttacttcagtgtatgcc
tccaggtttctttcttccttgagttcctgccttgagtccctcagagatgg
agtgttaactgtaaggaatataaacctgtcttcccaagttagcttttagc
agtatatatcaatccataggggggaaaacccctagaacacaagggaaatg
gtatgaaagaaaagtgtgggtaagaaaaaaatgtactcaattagaaaagg
cagtagattagagtaatggtgattggg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaattggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactatggaaatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagataccaaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtgaacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagataa
aaggatggaccatgtagacactaccatatccggggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagattatgctgaaa
ggaccctgatatagctgtctcttgtcagagtatgcctgggcctagcaaac
atagaagtggatgctcacagtcggctattggatggatcacatggccccca
atgaaggagctagaagaaagtaccaaagagctaaagggatctgcaaccta
tagtggaacacatatgacctaccagtaccccagagctctgaactcttagc
tgcatatgcatcaaagatgactaatcgccaattactgaaaggaaagccat
ggacacgcaacctttatatgccagtacatggaaccccaggtctgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_43265452_43266479
seq2: B6Ng01-258H05.b_46_1072 (reverse)

seq1  CCCAATCA-CATTACTCT-ATCTACTGCC-TCTCTAATTGAGTACA-TTT  46
      |||||||| ||||||||| |||||||||| | |||||||||||||| |||
seq2  CCCAATCACCATTACTCTAATCTACTGCCTTTTCTAATTGAGTACATTTT  50

seq1  TTTCTTACCCACACTTTTCTTTCATACCATTTCCCTGGTGTTCTAGGGGT  96
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTTCTTACCCACACTTTTCTTTCATACCATTTCCCTTGTGTTCTAGGGGT  100

seq1  TTTCCCCCCTATGGATTTGATAATATACTGCTAAAAAGCTAACTTGGGGA  146
      ||||||||||||||| ||||| |||||||||| |||||||||||| ||||
seq2  TTTCCCCCCTATGGA-TTGAT-ATATACTGCT-AAAAGCTAACTT-GGGA  146

seq1  AGACAGGTTTATATTCCTTACAGTTAACACTCCATCTCTGAGGGAACTCA  196
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AGACAGGTTTATATTCCTTACAGTTAACACTCCATCTCTGAGGG-ACTCA  195

seq1  AGGCAGGAACTCAAGGAAGAAAGAAACCTGGAGGCATACACTGAAGTAAA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGAACTCAAGGAAGAAAGAAACCTGGAGGCATACACTGAAGTAAA  245

seq1  GAGCCATAAAGAAGTGTTGCTTACTGACTGGTTGTTCCTGGCTTGTTCAG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCATAAAGAAGTGTTGCTTACTGACTGGTTGTTCCTGGCTTGTTCAG  295

seq1  TTTCTTTTATTAAATTGTACCTGTCCAGGAATGGCACTGACCATAGTGAG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTATTAAATTGTACCTGTCCAGGAATGGCACTGACCATAGTGAG  345

seq1  CTTGGGTGCTCTCATAGTTACCATTAATCAAAGAAATAATTCCCACAGAC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGTGCTCTCATAGTTACCATTAATCAAAGAAATAATTCCCACAGAC  395

seq1  TTGCCTGCAGGCATTTCTCAGGTGAGGAGGTTCCCTTTCCTCAGGTGACA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTGCAGGCATTTCTCAGGTGAGGAGGTTCCCTTTCCTCAGGTGACA  445

seq1  CTAACATGTGGCAAATTGTCATAACCTAACCAGCACACATATAGGGAATA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACATGTGGCAAATTGTCATAACCTAACCAGCACACATATAGGGAATA  495

seq1  ACAACCCCTAGCCTCTCCTTTCAAATGTCTGTCCATATTAATGTCATCTA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCCCTAGCCTCTCCTTTCAAATGTCTGTCCATATTAATGTCATCTA  545

seq1  ATTTCTTCAGTAATTCAGTGGCTCTCTATAACACAAAGCCTCCAAGGATA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTCAGTAATTCAGTGGCTCTCTATAACACAAAGCCTCCAAGGATA  595

seq1  TAACAACAAATTAATTACCCTACATTCAAATGGGGGGTAATATAGAATTA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAACAAATTAATTACCCTACATTCAAATGGGGGGTAATATAGAATTA  645

seq1  ATGGACAAACACCTAAATAACAATGTGAAGAGAAATAGTCTTGGGAAGAG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACAAACACCTAAATAACAATGTGAAGAGAAATAGTCTTGGGAAGAG  695

seq1  AGCGTGCTGAGGTCAGAGTGAAGACTGGTATTTTGCACACATGACCAGAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTGCTGAGGTCAGAGTGAAGACTGGTATTTTGCACACATGACCAGAA  745

seq1  CAATCCTTTTTAACACATTGGCAAAGAAGGAATTAGAACACAGCCACATC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCTTTTTAACACATTGGCAAAGAAGGAATTAGAACACAGCCACATC  795

seq1  AGAATCTCATGAAGAAATTTCAAGACCAAGAAGAGCTAATGAGAAACTCT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCTCATGAAGAAATTTCAAGACCAAGAAGAGCTAATGAGAAACTCT  845

seq1  ATATAAACTCAAACTCCATCTTTTCAAAACAGTAAAATGAAGTCACTGAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAACTCAAACTCCATCTTTTCAAAACAGTAAAATGAAGTCACTGAT  895

seq1  AATAACAAAAGAGCAGTAAGAGCCAGGTCAGAGTGGGAGGCCAGCGAGGC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACAAAAGAGCAGTAAGAGCCAGGTCAGAGTGGGAGGCCAGCGAGGC  945

seq1  TAGAGTAGGAGGTAAGGACCAACCACATAGCTTTGTGGTACATTTTTAAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTAGGAGGTAAGGACCAACCACATAGCTTTGTGGTACATTTTTAAA  995

seq1  ACTGTGATTTGAATCCTAGAGACCGAGAATTC  1028
      ||||||||||||||||||||||||||||||||
seq2  ACTGTGATTTGAATCCTAGAGACCGAGAATTC  1027