BAC Information

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BAC

Clone NameB6Ng01-263L01
Chromosome19 (Build37)
Map Location 11,778,670 - 11,778,827
singlet/doubletsinglet
Overlap geneGm97
Upstream geneVps37c, Cd5, Cd6, Slc15a3, Tmem132a, Tmem109, Prpf19, Zp1, Gpr44, Ccdc86, Ms4a10, E530011F12Rik, 5033428B15Rik, AW112010, Ms4a8a, Gm336, LOC624395, 1700025F22Rik, Ms4a13, Ms4a12, Ms4a1, Ms4a5, Gm1276, Ms4a7, Ms4a4a, LOC435588, Ms4a4c, LOC433221, Ms4a4b, Ms4a6c, EG666926, Ms4a6b, Ms4a4d, LOC100040454, Ms4a6d, Ms4a2, Ms4a3, Plac1l, Oosp1
Downstream geneGif, EG666958, Mrpl16, Stx3, Olfr1417, Olfr1418, Olfr1419, EG622845, EG666985, Olfr1420, AV312086, Osbp, GA_x5J8B7W6KF8-6942124-6941700, Olfr1422-ps1, Olfr1423, Olfr1424, Olfr1425, Olfr1426, Olfr1427, Olfr1428, Olfr76, Olfr1555-ps1, Olfr1430-ps1, Olfr1431, Olfr1429-ps1, Olfr262, Olfr232, Olfr1433, Olfr1435-ps1, Olfr1436, Olfr1437, Olfr1438-ps1, Olfr1439-ps1, Olfr1440, Olfr1441, Pfpl, Mpeg1, Dtx4, EG625046, 4632417K18Rik, EG240549, Glyat, Olfr1442, Olfr1443, Keg1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263L01.bB6Ng01-263L01.g
ACCGA067792GA067793
length1,005967
definitionB6Ng01-263L01.b B6Ng01-263L01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgtggaataccgaatggctgagaagcacctgaaaaaatg
ctcagcatcattaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcacaccactcagaatggctaagattaaaaattcaggtgacagg
agatgctggcaaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcgtgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatattactactggaggatcccgcaatacctctcctgggc
atatatccagaagatgtcccaactggtaagaaggaaacatgctccactat
gttcataacagccttatttataatagccagaagctggaaagagcccagat
gcccctcaacagaggaacggatacaaaaaaatgtggtacatttacacaat
taagggttactcagctattaaaaagaatgaatttatgaaattcctaggca
aatggatagacctgagtgaagtaacacaatcacaaaagaactcaaatgat
atgttaataagattcttatgtttatcttttccacctggtattctctggag
ttatttgttatagttgtctctgtttagagattgttcctctggtgagtctg
ttatcctctatcagcagacctgggtgactagctctttcctctgagttcct
gtggtcagagcagtctctgcaggcaagctctcctcttacagggaaggtgc
actcttatctggtgtttgggcctcctcctggccgaagatgaaggcccaaa
acaggacctttcccagaagctctgtggctcttgcctgtcccagaagctgt
tagcttctgtgtgcacactctcacctgtgtagactactttctgaggagtc
ctggaaccaagatggctcccgcggatcctgaggcaaaagcctcccaagca
gggcagacacctgtgctctggccgggaaggtggcccgatgtctggagcct
gaaga
gaattctacatttggatcaaagcaaccaggagaagattgtttgctaggca
gctaggaggaaggtctcaaagaccacccccacagtgacacacttcctcca
aaaaggtcatatctgttccaacaaggccacaccttctaatagtgcaattc
tgttttgtttgtttgttttaaaattatgtatttatttatttatttttatt
agatattttattcacatttcaaatgatatccccttccctctccagagacc
cccccttgtttctatgagagagctccccaacccatctatccactcccccc
ctccccctcatccccccgccttcacttacactgaactgagcacaggctcc
caatggaggagttagagaaaggactgaaggaactgaaggggattgcaacc
acatagaaaaaacaataataatcaaccaatcagacatacccagaactccc
agggactaaaccaccaaccaaggagtacacatgcagcaacccatgactcc
agccacatatatagcagaggatggccttgttgggcatcaatggaaggaga
ggcccttggtcctgtaatagtgaaattctatgggccaagcatgttcacac
caccaaaagaggggaaagagtataagagtcacaggatggaggacactaag
aaaccaaggacctctaaataaaacatgagttaaattcatatgaactcaca
gagactgaagcagccatacacagagcctgcatgggttggcactagggtct
ctttgtatatattatggcttccatgtctaagagcatgaataactggaatt
attgtgtctttcctgggggttttatcctttcgttgatttttttcttgttg
aactttgatgtgacaattattgttttatctcattttattttgtcatattt
tactattatcctcttagaagcctattatttttttatgagaaaaataaaag
aaatgggatgtttaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_11778670_11778827
seq2: B6Ng01-263L01.g_220_355

seq1  TTTTGTTTGTTTGTTTTTTAAGTAATTTTATTTTTAATTTTTTTTACATT  50
      |||||||||||||  ||||||  |||| | | ||||  ||| ||||   |
seq2  TTTTGTTTGTTTG--TTTTAA--AATTATGTATTTA--TTTATTTA---T  41

seq1  TTTTATTAGATATTTTCTTTATTTACATTTCAAACGTTATCCCCTTTCCT  100
      |||||||||||||    |||||| |||||||||| | ||||||||| |||
seq2  TTTTATTAGATAT----TTTATTCACATTTCAAATGATATCCCCTTCCCT  87

seq1  AGTTTCCCCTCCAAAAACCCCCTATCCCCTCCACCTCT---CCTGCTTCC  147
              ||||| | |||||    ||| |    || |      ||| ||
seq2  --------CTCCAGAGACCCC----CCCTTGTTTCTATGAGAGAGCTCCC  125

seq1  CAACCCATCTA  158
      |||||||||||
seq2  CAACCCATCTA  136