BAC Information

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BAC

Clone NameB6Ng01-265F01
Chromosome19 (Build37)
Map Location 56,974,434 - 57,117,640
singlet/doubletdoublet
Overlap geneVwa2, Afap1l2, Ablim1
Upstream geneTcf7l2, LOC100043484, Habp2, Nrap, Casp7, 9930023K05Rik, Dclre1a, Nhlrc2, Adrb1, EG629643, A630007B06Rik, 1700010L13Rik, Tdrd1
Downstream geneEG668259, AI450540, Trub1, LOC100043038, Atrnl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265F01.bB6Ng01-265F01.g
ACCGA068998GA068999
length1,1701,042
definitionB6Ng01-265F01.b B6Ng01-265F01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,116,457 - 57,117,640)(56,974,434 - 56,975,489)
sequence
gaattctttttcctgacttttaattatatgagatcactagcagtctcgct
agagcactaaaaaaatactcttcctttcttctcactcagcttcccatgct
ccatcatctaaaacttcatctctccctggttatggaaagaatggccttca
ccgggtaagacctccttcagtcgacggtgtctgtatgtctctctccctca
tttctgtactgacacatcatcagaataatctttcttaggtatttttattt
ttgttacatttttatttacttcgtatgcatgccatgcgcacgcgcacaca
cgcgtgcacatgagcacatgcatgacgtcacatgtatagagatcagaagg
caacttgcgggaaccggttttctcgctccaccatgtaaatcctgcaaatt
aaactcagactcatgaggcttgagcaggtacctttatgcactagacatcc
taccgacccctgaatggtctcttcatcttggtgttcgaatacaaggcaaa
ttgccatctgcctggccacttggtgaatcactttgagttataagcaaaat
gaaatacttcttttcaaggggaggaaactgactttagatggatgatctgt
gtaagttttacagactacagtaagacatagcaggcaatttcttccagtaa
ggcaaaaagttatcacttgattcattatctctataaagagagtcggtgac
aaccaccttcccccaccaagctagaataattacaattatataactaggcc
tagaaatacatttggtggtaatgagggtaggggtgtctctctagtcctga
ggctgttctggaacttactgtgtagactacagcggtctcaaactcacaga
gataagctgggatcagaggtgtgcatcaccatgtcccgcctgccttagaa
atacatgttatctctgacaagaaatacttgctctctaaaagcctgctgga
cagtagtaccacagatgcctgcaaacactgggacttcaagttgagaataa
gtagataaataagagtatccagaaaaaaaaaacaaagagtatcaggattt
agtctggatgattttggggtctataagtctgatcaccccccctcctcaat
ccaagctctttgataagatggacaccgagtggatttccaatgtaaaatcc
tctccatgcagccagtttcc
gaattcactttgtagaccaggctggcctcgaactgagaaatctgcttgcc
tctgcctcccaagtgctgggattaaaggcgtgcgccaccaccgtgcagct
cagaccagagacagttatgttcaaagcactaagctgctggtgtatgctgg
gcacactggtaggggctggggggtcactggggcacactggggtgtgctgg
ggcatactggggcatggctggacctgagctgtgtggtaaaagtcaagaag
ggtaatggctgtagagtcacatgtggactgggagtgaagactggagcgtc
ctggcctgaaccctagagtgaatggtgatgtcatttttcaacatggcaga
gaattaaaaaaaaaaaaaaaaaagaacaggaagccatctgaaagtatgct
ctttccatctccagccccctttcctgctggttgagcctctttgtgacgct
tctccattctagtcagcacctaagtttcttgggcagcttttgagaaagtc
tgctgctgggccaaaacagtggaggggggaaccagcgggccacatgtgag
aagccccctctgtgtgccaagggataactgggaagtgggtgaaagcttag
cctgcatggagtcgaataagatgaagagttaaacaaacgctagtcaagtt
tgcagcgtgatgaccttctcttcctgtctggctgagtttcaacacttctt
tccttcacatcacagactccctcattttcattaatttataaactatttct
ctgcaccagggtctgggcacacatgcttgccgaggtacacttgaggtcag
gacaactgtgggagtctatccttcctctctaccatgcgggtcccaggatc
aagtcaggtcatcaggctgggcatggcaccctgacctgctgagcctctca
ctggctcttagacaaatgaaaaatgaattagcatttatttgctttgtctt
attaacaagatctcttctcgtgactaagggtcatcacttacatttgtcct
ggcaccgttgatatgccttctggcactgaggattctatttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_57116457_57117640
seq2: B6Ng01-265F01.b_44_1213 (reverse)

seq1  GGAAACTGGCTGCAATGAGGAGAATTTCATCATTGGAAAATCTCAAT-GG  49
      ||||||||||||| |||  ||| |||| | |||||| ||||| || | ||
seq2  GGAAACTGGCTGC-ATGGAGAGGATTTTA-CATTGG-AAATC-CACTCGG  46

seq1  TGGTCATTTTTTATAAGAGCTGGGATT--GGGGGGGGGGAGAACAGACTT  97
      ||  ||| || |  ||||||| |||||  || ||||||| || |||||||
seq2  TGTCCATCTTATCAAAGAGCTTGGATTGAGGAGGGGGGGTGATCAGACTT  96

seq1  ATAAGACCCCAAAAATCCTTCCCAGGCTAAAATCCTGGATACTCTTTTTT  147
      || ||||||| |||||| |  |||| || ||||||| |||||||||| ||
seq2  AT-AGACCCC-AAAATCAT--CCAGACT-AAATCCT-GATACTCTTTGTT  140

seq1  TTTTTTTTCTGGATACTCTTATTTATCTTATTTATTCCTCAAACTTTGAA  197
      ||||||||||||||||||||||||||| || ||||| |||||   |||||
seq2  TTTTTTTTCTGGATACTCTTATTTATC-TACTTATT-CTCAA--CTTGAA  186

seq1  GTCCCAGTGTTTTGCAGGCATCTGTGGTACTACTGTCCAGCAGGCTTTTA  247
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCAGTG-TTTGCAGGCATCTGTGGTACTACTGTCCAGCAGGCTTTTA  235

seq1  GAGAGCAAGTATTTCTTGTTCAGAGATAAACATGTATTTCTAAAGGCAGG  297
      |||||||||||||||||| |||||||| ||||||||||||| ||||||||
seq2  GAGAGCAAGTATTTCTTG-TCAGAGAT-AACATGTATTTCT-AAGGCAGG  282

seq1  CGGGACATGGTGATGCACACCTCTGATCCCAGCTTATCTCTGTGAGTTTG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGACATGGTGATGCACACCTCTGATCCCAGCTTATCTCTGTGAGTTTG  332

seq1  AGACCGCTGTAGTCTACACAGTAAGTTCCAGAACAGCCTCAGGACTAGAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCGCTGTAGTCTACACAGTAAGTTCCAGAACAGCCTCAGGACTAGAG  382

seq1  AGACACCCCTA-CCTCATTACCACCAAATGTATTTCTAGGCCTAGTTATA  446
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGACACCCCTACCCTCATTACCACCAAATGTATTTCTAGGCCTAGTTATA  432

seq1  TAATTGTAATTATTCTAGCTTGGTGGGGGAAGGTGGTTGTCACCGACTCT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGTAATTATTCTAGCTTGGTGGGGGAAGGTGGTTGTCACCGACTCT  482

seq1  CTTTATAGAGATAATGAATCAAGTGATAACTTTTTGCCTTACTGGAAGAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATAGAGATAATGAATCAAGTGATAACTTTTTGCCTTACTGGAAGAA  532

seq1  ATTGCCTGCTATGTCTTACTGTAGTCTGTAAAACTTACACAGATCATCCA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCCTGCTATGTCTTACTGTAGTCTGTAAAACTTACACAGATCATCCA  582

seq1  TCTAAAGTCAGTTTCCTCCCCTTGAAAAGAAGTATTTCATTTTGCTTATA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAGTCAGTTTCCTCCCCTTGAAAAGAAGTATTTCATTTTGCTTATA  632

seq1  ACTCAAAGTGATTCACCAAGTGGCCAGGCAGATGGCAATTTGCCTTGTAT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAAGTGATTCACCAAGTGGCCAGGCAGATGGCAATTTGCCTTGTAT  682

seq1  TCGAACACCAAGATGAAGAGACCATTCAGGGGTCGGTAGGATGTCTAGTG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAACACCAAGATGAAGAGACCATTCAGGGGTCGGTAGGATGTCTAGTG  732

seq1  CATAAAGGTACCTGCTCAAGCCTCATGAGTCTGAGTTTAATTTGCAGGAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAGGTACCTGCTCAAGCCTCATGAGTCTGAGTTTAATTTGCAGGAT  782

seq1  TTACATGGTGGAGCGAGAAAACCGGTTCCCGCAAGTTGCCTTCTGATCTC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATGGTGGAGCGAGAAAACCGGTTCCCGCAAGTTGCCTTCTGATCTC  832

seq1  TATACATGTGACGTCATGCATGTGCTCATGTGCACGCGTGTGTGCGCGTG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACATGTGACGTCATGCATGTGCTCATGTGCACGCGTGTGTGCGCGTG  882

seq1  CGCATGGCATGCATACGAAGTAAATAAAAATGTAACAAAAATAAAAATAC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCATGGCATGCATACGAAGTAAATAAAAATGTAACAAAAATAAAAATAC  932

seq1  CTAAGAAAGATTATTCTGATGATGTGTCAGTACAGAAATGAGGGAGAGAG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAAAGATTATTCTGATGATGTGTCAGTACAGAAATGAGGGAGAGAG  982

seq1  ACATACAGACACCGTCGACTGAAGGAGGTCTTACCCGGTGAAGGCCATTC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACAGACACCGTCGACTGAAGGAGGTCTTACCCGGTGAAGGCCATTC  1032

seq1  TTTCCATAACCAGGGAGAGATGAAGTTTTAGATGATGGAGCATGGGAAGC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATAACCAGGGAGAGATGAAGTTTTAGATGATGGAGCATGGGAAGC  1082

seq1  TGAGTGAGAAGAAAGGAAGAGTATTTTTTTAGTGCTCTAGCGAGACTGCT  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGAGAAGAAAGGAAGAGTATTTTTTTAGTGCTCTAGCGAGACTGCT  1132

seq1  AGTGATCTCATATAATTAAAAGTCAGGAAAAAGAATTC  1184
      ||||||||||||||||||||||||||||||||||||||
seq2  AGTGATCTCATATAATTAAAAGTCAGGAAAAAGAATTC  1170

seq1: chr19_56974434_56975489
seq2: B6Ng01-265F01.g_64_1105

seq1  GAATTCACTTTGTAGACCAGGCTGGCCTCGAACTGAGAAATCTGCTTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGTAGACCAGGCTGGCCTCGAACTGAGAAATCTGCTTGCC  50

seq1  TCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCGCCACCACCGTGCAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCGCCACCACCGTGCAGCT  100

seq1  CAGACCAGAGACAGTTATGTTCAAAGCACTAAGCTGCTGGTGTATGCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCAGAGACAGTTATGTTCAAAGCACTAAGCTGCTGGTGTATGCTGG  150

seq1  GCACACTGGTAGGGGCTGGGGGGTCACTGGGGCACACTGGGGTGTGCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACTGGTAGGGGCTGGGGGGTCACTGGGGCACACTGGGGTGTGCTGG  200

seq1  GGCATACTGGGGCATGGCTGGACCTGAGCTGTGTGGTAAAAGTCAAGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATACTGGGGCATGGCTGGACCTGAGCTGTGTGGTAAAAGTCAAGAAG  250

seq1  GGTAATGGCTGTAGAGTCACATGTGGACTGGGAGTGAAGACTGGAGCGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAATGGCTGTAGAGTCACATGTGGACTGGGAGTGAAGACTGGAGCGTC  300

seq1  CTGGCCTGAACCCTAGAGTGAATGGTGATGTCATTTTTCAACATGGCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTGAACCCTAGAGTGAATGGTGATGTCATTTTTCAACATGGCAGA  350

seq1  GAATTAAAAAAAAAAAAAAAAAAGAACAGGAAGCCATCTGAAAGTATGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAAAAAAAAAAAAAAAAAAGAACAGGAAGCCATCTGAAAGTATGCT  400

seq1  CTTTCCATCTCCAGCCCCCTTTCCTGCTGGTTGAGCCTCTTTGTGACGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCATCTCCAGCCCCCTTTCCTGCTGGTTGAGCCTCTTTGTGACGCT  450

seq1  TCTCCATTCTAGTCAGCACCTAAGTTTCTTGGGCAGCTTTTGAGAAAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATTCTAGTCAGCACCTAAGTTTCTTGGGCAGCTTTTGAGAAAGTC  500

seq1  TGCTGCTGGGCCAAAACAGTGGAGGGGGGAACCAGCGGGCCACATGTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCTGGGCCAAAACAGTGGAGGGGGGAACCAGCGGGCCACATGTGAG  550

seq1  AAGCCCCCTCTGTGTGCCAAGGGATAACTGGGAAGTGGGTGAAAGCTTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCCCTCTGTGTGCCAAGGGATAACTGGGAAGTGGGTGAAAGCTTAG  600

seq1  CCTGCATGGAGTCGAATAAGATGAAGAGTTAAACAAACGCTAGTCAAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCATGGAGTCGAATAAGATGAAGAGTTAAACAAACGCTAGTCAAGTT  650

seq1  TGCAGCGTGATGACCTTCTCTTCCTGTCTGGCTGAGTTTCAACACTTCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCGTGATGACCTTCTCTTCCTGTCTGGCTGAGTTTCAACACTTCTT  700

seq1  TCCTTCACATCACAGACTCCCTCATTTTCATTAATTTATAAACTATTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCACATCACAGACTCCCTCATTTTCATTAATTTATAAACTATTTCT  750

seq1  CTGCACCAGGGTCTGGGCACACATGCTTGCCGAGGTACACTTGAGGTCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACCAGGGTCTGGGCACACATGCTTGCCGAGGTACACTTGAGGTCAG  800

seq1  GACAACTGTGGGAGTCTATCCTTCCTCTCTACCATGCGGGTCCCAGGGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GACAACTGTGGGAGTCTATCCTTCCTCTCTACCATGCGGGTCCCA-GGAT  849

seq1  CAAAGTCAGGTCATCAGGCTGGGCATGGCACCCTGACCTGCTGAGCCTCT  900
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  C-AAGTCAGGTCATCAGGCTGGGCATGGCACCCTGACCTGCTGAGCCTCT  898

seq1  CACTGGCTCTTAAGACAAATGAAAAATGAAATTAGCATTTATTTGCTTTG  950
      ||||||||||| |||||||||||||||| |||||||||||||||||||||
seq2  CACTGGCTCTT-AGACAAATGAAAAATG-AATTAGCATTTATTTGCTTTG  946

seq1  TCTTATTAAACAAAGATCTCTTCTTCGTGACTTAGGGTCATCCACTTACC  1000
      |||||||||   ||||||||||| |||||||| |||||||| ||||||| 
seq2  TCTTATTAA--CAAGATCTCTTC-TCGTGACTAAGGGTCAT-CACTTAC-  991

seq1  ATTTTGTCCTGGGCACCGGTGATAATGCCTTCTGGGCACTGAAGGATTCT  1050
        |||||||| ||||||| |||| ||||||||| ||||||| ||||||||
seq2  -ATTTGTCCT-GGCACCGTTGAT-ATGCCTTCT-GGCACTG-AGGATTCT  1036

seq1  ATTTCC  1056
      ||||||
seq2  ATTTCC  1042