BAC Information

Click to search

BAC

Clone NameB6Ng01-266O18
Chromosome19 (Build37)
Map Location 21,869,637 - 21,870,473
singlet/doubletsinglet
Overlap geneTmem2
Upstream geneTmc1, LOC100042287, LOC100042294, LOC100041602, LOC100041613, Zfand5, Gda, LOC100041633, 1110059E24Rik, 5730446C15Rik
Downstream geneEG433229, Trpm3, EG433230
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266O18.bB6Ng01-266O18.g
ACCGA070193GA070194
length1,175843
definitionB6Ng01-266O18.b B6Ng01-266O18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaacaactcacttaaagaaatacaggagaacactgctaaagagtt
acaagtccttaaagaaaaacaggaaaacactgctaaagagttacaagtcc
ttaaagaaaaacaggaaaacacaaccaaacaggtagaagtccttatagaa
aaacaggaaaacacatccaaacaggtgatggaaatgaacaaaaccatact
agacctaaaaagggaagtagacacaataaagaaaacccaaagtgaggcga
cgctggagatagaaaccctaggaaagaaatctggaaccatagatgccagc
atcagcaacagaatacaagagatggaagagagaatctcaggtgcagaaga
ctccatagagaacatcggcacaacaatcaaagaaaatggaaaatgcaaaa
agatcctaactcaaaacatccaggaaatccaggacacaatgagaagacca
aacctacggataataggagtggatgagaatgaagattttcaactcaaagg
accagcaaacatcttcaacaaaattattgaagaaaacttcccaaatctaa
agaaagagatgcccatgaacatacaagaagcctacagaactccaaataga
ctggaccagaaaagaaattcctcccgacacataataatcagaacaccaaa
tgcactaaataaagatagaatactaaaagcagtaagggaaaaaggtcaag
taacatataaaggcaagcctatcagaattacaccagatttttcaccagag
actatgaaagccagaagagcctggtcagatgttatacagacactaagaga
acataaatgccagcccaggctactatacccagccaaactctcaattacca
tagatggagaaaccaaagtattccacgacaaaactaaattcacccattat
ctctccacgaatccagcccttcaaaggataataacagaaaaaaacataca
aggacggaaccacgccctagaaaaaacaagaagatatccatcaacaaacc
taaaagaagacaccacagaacagaatgcaaactttacaacaaaatacaga
gcacatttacctttctaatatctctatatcatgactcagtccattaagga
cctagactaacagaactggctacgacaggactacatctgctgctacagaa
atcaattctctaagggagaaaagac
gaattccttctcagtagcttgtgacatggtgggacacacactatctaacg
ttatggagaattcccgctgtatgtttatgaaagaactgggagctggaaga
aaagttgttttatttttttttggtagtactagcgagcaatcctgggcttt
atgttaagcgagattctgccagtgaggagcaccatcagccccgaggatac
tgcctttagtataataatgatcactgaataatgtgaagagttaaagattc
tttatgaatctggtatgagaagaacaatcacattaaacagatgccaaggc
cttagtgatactgatttaattctagttgctcccacttcagagtgataaca
ttagtgataatataaggtgcttaaaaacaggaaggtgacaacattggggg
aaccggttcagaatgcacgtttagaatgctcttctatttaccagtgttct
cctttcacacaggcgcctaaacacttcttctcttcttctcattggcctaa
gcatatgtcactcatcccttaatttaaatacaggagcctaatttaacata
ggcgaagtgagtaacaattgggaccaggataggggagatacatatatttc
ttctattcttttaaaaataggtgcttttattatttttatgaatatgtgtg
ttcgtgtatctgtgttgagtgcatgtcacctggtgttgatccacgagacc
agtagaggatattggatcctttggaactgtcggtacaggacctttgaaag
ctagaagtggagtttggaaccaccttcaggtcctttgtagaagcttttat
tactcttagcatgttcattgttcgtctcaggccatcattcttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_21869637_21870473
seq2: B6Ng01-266O18.g_71_913

seq1  GAATTCCTTCTCAGTAGCTTGTGACATGGTGGGACACACACTATCTAACG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCTCAGTAGCTTGTGACATGGTGGGACACACACTATCTAACG  50

seq1  TTATGGAGAATTCCCGCTGTATGTTTATGAAAGAACTGGGAGCTGGAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGAGAATTCCCGCTGTATGTTTATGAAAGAACTGGGAGCTGGAAGA  100

seq1  AAAGTTGTTTTATTTTTTTTTGGTAGTACTAGCGAGCAATCCTGGGCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTGTTTTATTTTTTTTTGGTAGTACTAGCGAGCAATCCTGGGCTTT  150

seq1  ATGTTAAGCGAGATTCTGCCAGTGAGGAGCACCATCAGCCCCGAGGATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAAGCGAGATTCTGCCAGTGAGGAGCACCATCAGCCCCGAGGATAC  200

seq1  TGCCTTTAGTATAATAATGATCACTGAATAATGTGAAGAGTTAAAGATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTAGTATAATAATGATCACTGAATAATGTGAAGAGTTAAAGATTC  250

seq1  TTTATGAATCTGGTATGAGAAGAACAATCACATTAAACAGATGCCAAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGAATCTGGTATGAGAAGAACAATCACATTAAACAGATGCCAAGGC  300

seq1  CTTAGTGATACTGATTTAATTCTAGTTGCTCCCACTTCAGAGTGATAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTGATACTGATTTAATTCTAGTTGCTCCCACTTCAGAGTGATAACA  350

seq1  TTAGTGATAATATAAGGTGCTTAAAAACAGGAAGGTGACAACATTGGGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGATAATATAAGGTGCTTAAAAACAGGAAGGTGACAACATTGGGGG  400

seq1  AACCGGTTCAGAATGCACGTTTAGAATGCTCTTCTATTTACCAGTGTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCGGTTCAGAATGCACGTTTAGAATGCTCTTCTATTTACCAGTGTTCT  450

seq1  CCTTTCACACAGGCGCCTAAACA--------CTTCTTCTCATTGGCCTAA  492
      |||||||||||||||||||||||        |||||||||||||||||||
seq2  CCTTTCACACAGGCGCCTAAACACTTCTTCTCTTCTTCTCATTGGCCTAA  500

seq1  GCATATGTCACTCATCCCTTAATTTAAATACAGGAGCCTAATTTAAACAT  542
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GCATATGTCACTCATCCCTTAATTTAAATACAGGAGCCTAATTT-AACAT  549

seq1  AGGCGAAGTGAGTAACAATT-GGACCAGGATAGGGGAGATACATATATTT  591
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AGGCGAAGTGAGTAACAATTGGGACCAGGATAGGGGAGATACATATATTT  599

seq1  CTTCTATTCTTTTAAAAATAGGTGCTTTTATTATTTTTATGAATATGTGT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTATTCTTTTAAAAATAGGTGCTTTTATTATTTTTATGAATATGTGT  649

seq1  GTTCGTGTATCTGTG-TGAGTGCATGTCACCT-GTG-TGATCACAGAGAC  688
      ||||||||||||||| |||||||||||||||| ||| |||||   |||||
seq2  GTTCGTGTATCTGTGTTGAGTGCATGTCACCTGGTGTTGATCCACGAGAC  699

seq1  CAGTAGAGGATATTGGATCCTTTGGAACTGTCGTTACAGG-CACTTGAGA  737
      ||||||||||||||||||||||||||||||||| |||||| |  |||| |
seq2  CAGTAGAGGATATTGGATCCTTTGGAACTGTCGGTACAGGACCTTTGAAA  749

seq1  GCTAGAAGTGGGGTTGGGAACCACACTCAGGTCCTTTGTAAGAGCTCTTA  787
      ||||||||||| ||| ||||||||  ||||||||||||||  |||| |||
seq2  GCTAGAAGTGGAGTTTGGAACCACCTTCAGGTCCTTTGTAGAAGCTTTTA  799

seq1  TTACTCTTAAGCATTGTTCATTGTTCTGTCTCCAGCCCCATCATTTCTTG  837
      |||||||| |||| |||||||||||| |||||  |  |||||| ||||||
seq2  TTACTCTT-AGCA-TGTTCATTGTTC-GTCTCAGG--CCATCA-TTCTTG  843