BAC Information

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BAC

Clone NameB6Ng01-267M19
Chromosome19 (Build37)
Map Location 10,114,920 - 10,275,924
singlet/doubletdoublet
Overlap geneFads3, Fads2, LOC100040227, Fads1, Fen1
Upstream geneAhnak, Scgb1a1, Asrgl1, EG621699, LOC100040104, LOC623810, Pcna-ps2, LOC100040130, LOC100040137, LOC100040143, LOC100040152, Stxbp3b, LOC623688, LOC100040178, LOC100040192, 6720475J19Rik, LOC100040203, Incenp, LOC100040215, Fth1, Best1, Rab3il1
Downstream gene1810006K21Rik, Gm98, Dagla, Syt7, Gm705, 4930579J09Rik, 0610038F07Rik, 5730453I16Rik, 2810441K11Rik, Tmem138, Cybasc3, Dak, Ddb1, Vwce, Pga5, 2210404E10Rik, Vps37c, Cd5, Cd6, Slc15a3, Tmem132a, Tmem109, Prpf19, Zp1, Gpr44, Ccdc86, Ms4a10, E530011F12Rik, 5033428B15Rik, AW112010, Ms4a8a, Gm336, LOC624395, 1700025F22Rik, Ms4a13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267M19.bB6Ng01-267M19.g
ACCGA070824GA070825
length930924
definitionB6Ng01-267M19.b B6Ng01-267M19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(10,274,999 - 10,275,924)(10,114,920 - 10,115,842)
sequence
gaattcaaggccagcctggtctacagagtgagtttcaggacagccagggc
tacacaaagaaaccctgtctcggaaaaccaaaaaaaaaaacaaaaacaaa
agaacatcccagatctcattccttgaagcgcccagaacagcttctgattg
tcaggaggcctgcttgagaatggtggatcttgttcacctttgcctcttct
gctctgctggcttggagtcctgctgtgtctcatgttaagtttgatgaacc
atgagactggtgaatgttgccacttaaaacttttgttccttttgtatcct
ccaagttcctcctcttactcttctttctttgttttagccattgctcctgt
gctaccatgggaattcacggccttgccaaactaattgctgatgtggcccc
cagtgccatccgtgagaatgacatcaagagctactttggtcgcaaagtgg
ccatcgatgcctccatgagcatctaccagttcctgattgctgttcgtcag
ggtggggatgtgctgcagaacgaggagggtgagaccaccagccacctgat
gggcatgttctaccgtaccatccgcatgatggagaatggcatcaagcctg
tgtacgtctttgatggcaaaccaccacagctgaagtcaggcgagctggcc
aagcgcagtgagaggcgcgccgaggctgagaagcaactgcagcaggctca
ggaggctgggatggaggaggaggtggagaagttcaccaagaggctcgtga
aggtcaccaagcaacacaatgatgagtgcaaacacctgctgagcctcatg
ggcattccttaccttgatgcaccccagcgaggcagaggcccagctgtgct
gccctggtaaatgctggcaaagtctatgctgcggccacggaaggacatgg
actgcctcacttttggcaagccccgtgcta
gaattcagagctgacttaaagtgtatgaggggatatgtgaaggttacatg
catatactggttttttgtaggcaagaaacacaggttggttttgttatcca
caggggtgccttagaggtcaggtcacctacaaatccttaggtagaccaag
aggaaatgtttgcacattggaaaaaatacactttaaggttctgaaaagat
ttgctcccaacaaacaggtctgcctcacctttctgccctgagtcacacta
gggtggtgtgcgggagtctgttttaactagccctcaaggaaattctgatg
gaccttcaagtttgccagttgtgaaagcttttaacttttaaggaactgat
gtctgtctcaaagaaacatcgtacaattgggaacgtagttacactctcaa
gaggatttgaatttaataagtcaaaaatgtgacaccatgaatggggagaa
ctgggaggtggtgacaagcaagccacccattgcagactggaccattcttt
catctcctgaacggcagacctccacgcagcagtgtcctctgctcctcctc
cagtggccaacctgggcatccccaatcctgcgtacagccaggaggagagg
ccatctgctcctgcagattgctttagatggcttcctcgcgtggatattga
gggtttactgggggatgaggtccattgtttggtggctgttgacagtcacc
ccaaggtagtgtcctcatttctagctacctgggatgcctggttaaagacc
ggtgacgtccctaactacatttctcagcctttcagggctcagacttgggc
tcatttcgggcccctgcgggtgtgcctgggcgcagcggcctgcaggactc
ccgtgcgcgctgggtccccatcccccgccttctcagttgagccgaggagt
ccgagaaactgggggggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_10274999_10275924
seq2: B6Ng01-267M19.b_44_973 (reverse)

seq1  TAGCACGGGGC-TGCCAAAAGTGAGGCAGTCCATGTCC-TCCGTGGCCGC  48
      ||||||||||| |||||||||||||||||||||||||| |||||||||||
seq2  TAGCACGGGGCTTGCCAAAAGTGAGGCAGTCCATGTCCTTCCGTGGCCGC  50

seq1  AGCATAGACTTTGCCAGCCTTTGCCAGGGCAGCACAGCT-GGCCTCTGCC  97
      |||||||||||||||||| ||| |||||||||||||||| ||||||||||
seq2  AGCATAGACTTTGCCAGCATTTACCAGGGCAGCACAGCTGGGCCTCTGCC  100

seq1  TCGCT-GGGTGCATCAAGGTAAGGGATGCCCATGAGGCTCAGCAGGTGTT  146
      ||||| |||||||||||||||||| |||||||||||||||||||||||||
seq2  TCGCTGGGGTGCATCAAGGTAAGGAATGCCCATGAGGCTCAGCAGGTGTT  150

seq1  TGCACTCATCATTGTGTTGCTTGGTGACCTTCACGAGCCTCTTGGTGAAC  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTCATCATTGTGTTGCTTGGTGACCTTCACGAGCCTCTTGGTGAAC  200

seq1  TTCTCCACCTCCTCCTCCATCCCAGCCTCCTGAGCCTGCTGCAGTTGCTT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCACCTCCTCCTCCATCCCAGCCTCCTGAGCCTGCTGCAGTTGCTT  250

seq1  CTCAGCCTCGGCGCGCCTCTCACTGCGCTTGGCCAGCTCGCCTGACTTCA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCCTCGGCGCGCCTCTCACTGCGCTTGGCCAGCTCGCCTGACTTCA  300

seq1  GCTGTGGTGGTTTGCCATCAAAGACGTACACAGGCTTGATGCCATTCTCC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGGTGGTTTGCCATCAAAGACGTACACAGGCTTGATGCCATTCTCC  350

seq1  ATCATGCGGATGGTACGGTAGAACATGCCCATCAGGTGGCTGGTGGTCTC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGCGGATGGTACGGTAGAACATGCCCATCAGGTGGCTGGTGGTCTC  400

seq1  ACCCTCCTCGTTCTGCAGCACATCCCCACCCTGACGAACAGCAATCAGGA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCCTCGTTCTGCAGCACATCCCCACCCTGACGAACAGCAATCAGGA  450

seq1  ACTGGTAGATGCTCATGGAGGCATCGATGGCCACTTTGCGACCAAAGTAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTAGATGCTCATGGAGGCATCGATGGCCACTTTGCGACCAAAGTAG  500

seq1  CTCTTGATGTCATTCTCACGGATGGCACTGGGGGCCACATCAGCAATTAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGATGTCATTCTCACGGATGGCACTGGGGGCCACATCAGCAATTAG  550

seq1  TTTGGCAAGGCCGTGAATTCCCATGGTAGCACAGGAGCAATGGCTAAAAC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCAAGGCCGTGAATTCCCATGGTAGCACAGGAGCAATGGCTAAAAC  600

seq1  AAAGAAAGAAGAGTAAGAGGAGGAACTTGGAGGATACAAAAGGAACAAAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGAAGAGTAAGAGGAGGAACTTGGAGGATACAAAAGGAACAAAA  650

seq1  GTTTTAAGTGGCAACATTCACCAGTCTCATGGTTCATCAAACTTAACATG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAAGTGGCAACATTCACCAGTCTCATGGTTCATCAAACTTAACATG  700

seq1  AGACACAGCAGGACTCCAAGCCAGCAGAGCAGAAGAGGCAAAGGTGAACA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACAGCAGGACTCCAAGCCAGCAGAGCAGAAGAGGCAAAGGTGAACA  750

seq1  AGATCCACCATTCTCAAGCAGGCCTCCTGACAATCAGAAGCTGTTCTGGG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCACCATTCTCAAGCAGGCCTCCTGACAATCAGAAGCTGTTCTGGG  800

seq1  CGCTTCAAGGAATGAGATCTGGGATGTTCTTTTGTTTTTGTTTTTTTTTT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTCAAGGAATGAGATCTGGGATGTTCTTTTGTTTTTGTTTTTTTTTT  850

seq1  TGGTTTTCCGAGACAGGGTTTCTTTGTGTAGCCCTGGCTGTCCTGAAACT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTCCGAGACAGGGTTTCTTTGTGTAGCCCTGGCTGTCCTGAAACT  900

seq1  CACTCTGTAGACCAGGCTGGCCTTGAATTC  926
      ||||||||||||||||||||||||||||||
seq2  CACTCTGTAGACCAGGCTGGCCTTGAATTC  930

seq1: chr19_10114920_10115842
seq2: B6Ng01-267M19.g_70_993

seq1  GAATTCAGAGCTGACTTAAAGTGTATGAGGGGATATGTGAAGGTTACATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGCTGACTTAAAGTGTATGAGGGGATATGTGAAGGTTACATG  50

seq1  CATATACTGGTTTTTTGTAGGCAAGAAACACAGGTTGGTTTTGTTATCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATACTGGTTTTTTGTAGGCAAGAAACACAGGTTGGTTTTGTTATCCA  100

seq1  CAGGGGTGCCTTAGAGGTCAGGTCACCTACAAATCCTTAGGTAGACCAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGTGCCTTAGAGGTCAGGTCACCTACAAATCCTTAGGTAGACCAAG  150

seq1  AGGAAATGTTTGCACATTGGAAAAAATACACTTTAAGGTTCTGAAAAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATGTTTGCACATTGGAAAAAATACACTTTAAGGTTCTGAAAAGAT  200

seq1  TTGCTCCCAACAAACAGGTCTGCCTCACCTTTCTGCCCTGAGTCACACTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCCCAACAAACAGGTCTGCCTCACCTTTCTGCCCTGAGTCACACTA  250

seq1  GGGTGGTGTGCGGGAGTCTGTTTTAACTAGCCCTCAAGGAAATTCTGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGTGTGCGGGAGTCTGTTTTAACTAGCCCTCAAGGAAATTCTGATG  300

seq1  GACCTTCAAGTTTGCCAGTTGTGAAAGCTTTTAACTTTTAAGGAACTGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTCAAGTTTGCCAGTTGTGAAAGCTTTTAACTTTTAAGGAACTGAT  350

seq1  GTCTGTCTCAAAGAAACATCGTACAATTGGGAACGTAGTTACACTCTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTCTCAAAGAAACATCGTACAATTGGGAACGTAGTTACACTCTCAA  400

seq1  GAGGATTTGAATTTAATAAGTCAAAAATGTGACACCATGAATGGGGAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATTTGAATTTAATAAGTCAAAAATGTGACACCATGAATGGGGAGAA  450

seq1  CTGGGAGGTGGTGACAAGCAAGCCACCCATTGCAGACTGGACCATTCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAGGTGGTGACAAGCAAGCCACCCATTGCAGACTGGACCATTCTTT  500

seq1  CATCTCCTGAACGGCAGACCTCCACGCAGCAGTGTCCTCTGCTCCTCCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCCTGAACGGCAGACCTCCACGCAGCAGTGTCCTCTGCTCCTCCTC  550

seq1  CAGTGGCCAACCTGGGCATCCCCAATCCTGCGTACAGCCAGGAGGAGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGCCAACCTGGGCATCCCCAATCCTGCGTACAGCCAGGAGGAGAGG  600

seq1  CCATCTGCTCCTGCAGATTGCTTTAGATGGCTTCCTCGCGTGGATATTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTGCTCCTGCAGATTGCTTTAGATGGCTTCCTCGCGTGGATATTGA  650

seq1  GGGTTTACTGGGGGATGAGGTCCATTGTTTGGTGGCTGTTGACAGTCACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTACTGGGGGATGAGGTCCATTGTTTGGTGGCTGTTGACAGTCACC  700

seq1  CCAAGGTAGTGTCCTCATTTCTAGCTACCTGGGATGCCTGGTTAAAGACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGTAGTGTCCTCATTTCTAGCTACCTGGGATGCCTGGTTAAAGACC  750

seq1  GGTGACGTCCCTAACTACATTTCTCAGCCTTTCAGGGCTCAGACTTGGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACGTCCCTAACTACATTTCTCAGCCTTTCAGGGCTCAGACTTGGGC  800

seq1  TCATTTCGGGCCCCTGCGGGTGTGCCTGGGCGCAGCGGCCTGCAGGACTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCGGGCCCCTGCGGGTGTGCCTGGGCGCAGCGGCCTGCAGGACTC  850

seq1  CCGTGCGCGCTGGGTCCCCATCCCCCGCCTTCTCAGTTGAGCCGA-GAGT  899
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CCGTGCGCGCTGGGTCCCCATCCCCCGCCTTCTCAGTTGAGCCGAGGAGT  900

seq1  CCGAGAAACTGGGGGGGGGGGGGG  923
      ||||||||||||||||||||||||
seq2  CCGAGAAACTGGGGGGGGGGGGGG  924