BAC Information

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BAC

Clone NameB6Ng01-271H08
Chromosome19 (Build37)
Map Location 13,541,682 - 13,542,776
singlet/doubletsinglet
Overlap genenone
Upstream geneDtx4, EG625046, 4632417K18Rik, EG240549, Glyat, Olfr1442, Olfr1443, Keg1, Zfp91, Cntf, Lpxn, EG383436, Olfr1444, Olfr1445, Olfr1446, Olfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451, Olfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1, Olfr1457, EG667271, Olfr1459, Olfr1460-ps1, Olfr1461, Olfr1462, Olfr1463, LOC667300, Olfr1465, Olfr1466, Olfr1467, Olfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472, Olfr1473-ps1
Downstream geneOlfr1474, Olfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655, Olfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653, Olfr1487, GA_x5J8B7W6KF8-5425983-5425664, Olfr1489, Olfr1490, Olfr1491, Olfr1492-ps1, Olfr1493-ps1, Olfr1494, Olfr1495, Olfr1496, Olfr1497, Olfr1498-ps1, Olfr1499, Olfr1500, Olfr1501, Olfr1502, Olfr1503-ps1, Olfr1504, Olfr1505, EG667433, Tle4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-271H08.bB6Ng01-271H08.g
ACCGA073534GA073535
length1,1991,113
definitionB6Ng01-271H08.b B6Ng01-271H08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtaccccattttcaatagggttatttggttc
tctggagtctaccttcttgaggttttgtatacattggatattagcctact
ttgggatatcttttgtatacattagatattagccttctttgggatatctt
ttgtatacattagatattagccttcttgaggttttttatacattaaatat
tagccttcttgaggttttgtatacattagatattagccttctttgggata
tgggattggataagaacttttcccaatctcttagttgctgttttgtctta
ttgaaagtgtgttttgccttacagaagctttgcaattttatgatgtccca
tttgttgattcttgatcttagagcataagtcattggttcagaagttcagg
aaattttcccctgtgcctgtgtgttcgaggttcttccccacattctcttc
tatcagtttaagtgtatctggctttctatggagatccctgatccacttgg
acttgagatttgtacaaggtgataaaaatggatcaatttgcattcttctt
catgctgacctctagttgaaccagtagcatttattaaaaatgctattttc
ccccactggatggtttttagctcctttgtcaaaggtcatgtgaccacggg
tgtttagtttcatttctgggtattcatattctgggttccattgttctacc
tgttgcttcaagatctgtcaaaaattatgttcgaattttggggggatgtc
attaaatctgtagattgtttttgctaggatgaccaatcctattgatttgt
ggctatgaaagatatttctaacttttttttttcttcttcaattttgttct
tcaaagactagaagtttctattatatgtatctttctcttgcttgggctag
tgttatcctaagacattttatacttttgaggcaattgtagaagttgttgt
tgattgatttcattcacaaccatttactatttttatataaaaaacgtact
tatatttgtgagttaagtttgcccagtactttaatggatgtgtttatcgg
ctctaggatttcttcatacaatttgagtacatatgtatactattcataga
actaaattaaagatactttggataccttccattcctactgaatcttattg
agtctttttaacctctctaatgctctctcctgagaaaatttctcagaga
gaattcaaaagtagaaatacaaaaaagaaatgaaagatggtatatagaga
taaacttctgtcagcaaaaacttcttttaatgggcaggaacattcaacac
agatatgcatgcctggtcaaattgctgagaataagagattgagtgttcac
atgaaaatagaacatgcatattaaccctatcaccactatctaggctctgg
gaatacacaggaagtggaaatgaaaatatataaaagccagtggaagagaa
ggaaatctgctaaataataatttctggtcatgacataggtaatataatcc
tgaattcagcagctatagttatctccataagaactatacacgactaagtg
agtacaataaccccaatgtatttgttagatattctccaggcctcaccact
ttgttgggagctattggaaattaatattttctgcagaagaaacatttttg
aggatgttatgactatacatttcccattctccaatgcatagctccatgac
cataaataaaactcactgcgttaatgatttattgaaaaaaaaaaaaaacc
aacaccaagaagactaacaacagcaacaacaaaaggatgtatttttttgg
gagtgtgttaaagtagtcatgggaagagttggagtggggacatggatgtt
atatcattatatattatatctcaattttacattattaaaattttcaaatt
aaaaattaaaaatatatagttacagcaagtataaatatattaaacttatt
tcacaaatatgtaagtcatagaattttaattgctttttttctgagtaatt
ggagtgagaatcaatcactaccttgagggagtctgttccctgagagaatt
ctaatatttgtacaattttcacctagcctccccaaaactggccactgaac
atattttcatagttcttggtgtgggaattattttaagaaagcaggattct
ggagcagactgccattggctttccattttcaggtgaattctaatacatta
agaagctcacaatgaaccattcttcagagttttggttggtatggtgtgag
gatggagtatgtaaacatgtcaggccaaacatatgccagggtctgcagaa
catatattttaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_13541682_13542776
seq2: B6Ng01-271H08.g_61_1173

seq1  GAATTCAAAAGTAGAAATACAAAAAAGAAATGAAAGATGGTATATAGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAAGTAGAAATACAAAAAAGAAATGAAAGATGGTATATAGAGA  50

seq1  TAAACTTCTGTCAGCAAAAACTTCTTTTAATGGGCAGGAACATTCAACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTTCTGTCAGCAAAAACTTCTTTTAATGGGCAGGAACATTCAACAC  100

seq1  AGATATGCATGCCTGGTCAAATTGCTGAGAATAAGAGATTGAGTGTTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATGCATGCCTGGTCAAATTGCTGAGAATAAGAGATTGAGTGTTCAC  150

seq1  ATGAAAATAGAACATGCATATTAACCCTATCACCACTATCTAGGCTCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAATAGAACATGCATATTAACCCTATCACCACTATCTAGGCTCTGG  200

seq1  GAATACACAGGAAGTGGAAATGAAAATATATAAAAGCCAGTGGAAGAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACACAGGAAGTGGAAATGAAAATATATAAAAGCCAGTGGAAGAGAA  250

seq1  GGAAATCTGCTAAATAATAATTTCTGGTCATGACATAGGTAATATAATCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATCTGCTAAATAATAATTTCTGGTCATGACATAGGTAATATAATCC  300

seq1  TGAATTCAGCAGCTATAGTTATCTCCATAAGAACTATACACGACTAAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTCAGCAGCTATAGTTATCTCCATAAGAACTATACACGACTAAGTG  350

seq1  AGTACAATAACCCCAATGTATTTGTTAGATATTCTCCAGGCCTCACCACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAATAACCCCAATGTATTTGTTAGATATTCTCCAGGCCTCACCACT  400

seq1  TTGTTGGGAGCTATTGGAAATTAATATTTTCTGCAGAAGAAACATTTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGGGAGCTATTGGAAATTAATATTTTCTGCAGAAGAAACATTTTTG  450

seq1  AGGATGTTATGACTATACATTTCCCATTCTCCAATGCATAGCTCCATGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGTTATGACTATACATTTCCCATTCTCCAATGCATAGCTCCATGAC  500

seq1  CATAAATAAAACTCACTGCGTTAATGATTTATTGAAAAAAAAAAAAAACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAATAAAACTCACTGCGTTAATGATTTATTGAAAAAAAAAAAAAACC  550

seq1  AACACCAAGAAGACTAACAACAGCAACAACAAAAGGATGTATTTTTTTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCAAGAAGACTAACAACAGCAACAACAAAAGGATGTATTTTTTTGG  600

seq1  GAGTGTGTTAAAGTAGTCATGGGAAGAGTTGGAGTGGGGACATGGATGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTGTTAAAGTAGTCATGGGAAGAGTTGGAGTGGGGACATGGATGTT  650

seq1  ATATCATTATATATTATATCTCAATTTTACATTATTAAAATTTTCAAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCATTATATATTATATCTCAATTTTACATTATTAAAATTTTCAAATT  700

seq1  AAAAATTAAAAATATATAGTTACAGAAAGTATAAATATATTAAACTTATT  750
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AAAAATTAAAAATATATAGTTACAGCAAGTATAAATATATTAAACTTATT  750

seq1  TCACAAATATGTAAGTCATAGAATTTTAATTGCTTTTTTTCTGAGTAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAATATGTAAGTCATAGAATTTTAATTGCTTTTTTTCTGAGTAATT  800

seq1  GGAGTGAGAATCAATCACTACCTTGAGGGAGTCTGTTCCCTGAGAGAATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGAGAATCAATCACTACCTTGAGGGAGTCTGTTCCCTGAGAGAATT  850

seq1  CT-ATATTTGTACAATTTTCACCTAG-CTCCCC-AAACTGGCCACTG-AC  896
      || ||||||||||||||||||||||| |||||| ||||||||||||| ||
seq2  CTAATATTTGTACAATTTTCACCTAGCCTCCCCAAAACTGGCCACTGAAC  900

seq1  ATATTTTCATAG-TCTT-GTGT-GGAATTATTTTAAAGAAGCAAGATTCT  943
      |||||||||||| |||| |||| |||||||||||||  ||||| ||||||
seq2  ATATTTTCATAGTTCTTGGTGTGGGAATTATTTTAAGAAAGCAGGATTCT  950

seq1  -GAGCAGACTGCCATT-GCTTTCCATTTTTTCAGGTGAATTCTAATACAT  991
       ||||||||||||||| ||||||||  |||||||||||||||||||||||
seq2  GGAGCAGACTGCCATTGGCTTTCCA--TTTTCAGGTGAATTCTAATACAT  998

seq1  TAAG-AGCTCACAATG-ACCATTC-TCAGAGTTTT-GTGTGTAT-GTGTG  1036
      |||| ||||||||||| ||||||| |||||||||| ||  |||| |||||
seq2  TAAGAAGCTCACAATGAACCATTCTTCAGAGTTTTGGTTGGTATGGTGTG  1048

seq1  AGGAT-GAGTATG-AAACAAG-CAGGCCAAACATAT-CCA-GTTCT-CAG  1080
      ||||| ||||||| ||||| | |||||||||||||| ||| | ||| |||
seq2  AGGATGGAGTATGTAAACATGTCAGGCCAAACATATGCCAGGGTCTGCAG  1098

seq1  AA-ATATTATTTTAAA  1095
      || ||| |||||||||
seq2  AACATA-TATTTTAAA  1113