BAC Information

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BAC

Clone NameB6Ng01-274J19
Chromosome19 (Build37)
Map Location 7,954,004 - 7,955,179
singlet/doubletsinglet
Overlap geneAB056442
Upstream genePrdx5, 0610038D11Rik, Esrra, 1700019N12Rik, Kcnk4, Gpr137, Bad, Plcb3, Ppp1r14b, Fkbp2, Vegfb, Dnajc4, Nudt22, Trpt1, BC032204, Stip1, D930010J01Rik, Flrt1, Otub1, Cox8a, Nat11, Rcor2, Mark2, AI846148, EG665419, 2700081O15Rik, Rtn3, LOC100039547, 5730596K20Rik, Hrasls3, Lgals12, Hrasls5, LOC433217, Slc22a19, LOC666543, BC014805, LOC632903
Downstream geneLOC620946, LOC623030, 9530053H05Rik, EG434674, LOC100039705, D630002G06Rik, EG633120, EG666601, LOC100039749, C730048C13Rik, LOC100040004, LOC666612, EG623402, Slc22a8, Slc22a6, Chrm1, Slc3a2, Snord22, Wdr74, 1700092M07Rik, Stx5a, LOC100039902, Nxf1, 0610006I08Rik, 1810059G22Rik, Taf6l, LOC100039957, Polr2g, Zbtb3, Ttc9c, Hnrpul2, Gng3, Bscl2, 1110067I12Rik, D19Ertd721e, AI462493
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274J19.bB6Ng01-274J19.g
ACCGA075868GA075869
length1,1641,189
definitionB6Ng01-274J19.b B6Ng01-274J19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttttcctgaatctattttcagtcattcagaatcaatggaagtc
aaatataagtaccattagcattgaaactcaatggtctaaataaaatttgg
attttatgttaagtaactcttaaattattttcctttctaacctttatctg
cagctccaaggactcctttaatgttcattaagcacctataatcccttctt
taatactcactgtagaaatcccctgagtgtctttttgtctcctggacttt
catttcactctaatttttgggtgtaaatttatctttggtgtttatatttt
cagtatgtagaacaataattattgatctggtcttctacaagtgtccaaaa
taccctggagttctcatcactttgtgacaactaaaaaaagtgttgatttt
attttcaaagattgtgagaacaagtatgaaggcagaacttgaggcagcaa
agactaaaccttctctaagagatttgttccatacatctatcctacgtaag
cggatatgtgtcctgtcctttatgaggtatgcttacaatgtgcctattga
aatagtgtacagacaaattttctcactgacagatttgaggtagaatatga
caatttctgctgctagaagtaatcaaagagttttgagtatatggaattta
ctgtgcagtgaggagtgtgtgcatccaaacttcctgccaggctcattacc
atgggctgatggtgagaatgccaatcacagtataaacttggatgttgtta
ctccccagttgcctggttccactcaaataaatataaaaattctaatataa
tttatgtaaatacatttaactcaagaacatatgtagatataaagatagaa
ccttcaaccacaaacctgctaatattttccaaaactttaagagtgattat
gtgctccctcaccatacaatggttttggtggctataaaattatactctag
aactaaaaattccaaaaagccaagataccttcatagtcaacctactagaa
cttgatttcttgtctaatatattacatctgttgaaaatcattcaaccttg
tgatacccatttttctttccaccacagactttttttttacagtatcattt
ttggctggccagtcacctcacacttgagttcttaaattatctgtgcagtt
ctcaattaggtgca
gaattctctgatgtaactttttgggtcacttatttatactgttatttcat
ctgcaaatagtgatattttgacttctttctttctaacttgcatctcattg
atctccttttgttgtctaattgctctggctaggacttcaagtactatatt
gaataggtagggaaaaagtgggcagccttgtctagtccctgattttagtg
ggattccttcgagtttctctctatttagtttgatgtcggctactggtttg
ctgtatattgcttttatcatgtttaggtctgagcattgaattcctaatct
ttccatgacttttatcacgaagggttgttgtattttgtcaaatactttgt
cagcatctaatgagatgatcatgttgttttttatctttgagtttgtttat
atagtggattatatagtgcatccttggaattaagcctacttggtcatgat
ggatgactattgatgactgcttctatttctttaggggaaatgggactgtt
tagatcgccaatgtgatcctgatttaactttggtacctggtatctgtcta
ggacattgtccatttcatccaggttttccagttttgttgagtatggcctt
ttgtagtatgatctgatgatgttttggatttcctaaggttctgttgttat
gtctcctatttcatttctgattttgttaattaggatactgttcctgtgcc
ctgtagttagtctggctaagggtttatctatcttgttgattttctcaaag
aaccagcttcttgtttggttgattccttgaatagttctttttgtttccac
ttggttgatttcagccttgactttgattatttcctgccgtctactcctct
tgggtgaatttgcttcctttagttctagagcttctagatgtgctgtcagg
ctgctagtgtatgcactctctagtttcttttggggaggcactcagtgcta
tgagtttttctttctaggactgctttcatggtgtcccataaatttgggta
tgtgtgcttcattttcattaaactctggaaaatctttatttctttcttat
tcatctttgccaaggtatcactgagtagattgtgtccagtttcaagtgat
gtggcctttcttttaccttatgctgttatggaatcagccttgttctgtgg
tgatctggatgcgagatgacactaggagaataatagtta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_7954004_7955179
seq2: B6Ng01-274J19.b_49_1212 (reverse)

seq1  TGCA-CTAA-TGAGAAACTGCAACAGGATAATATTAGAACTCAGGTGTTG  48
      |||| |||| |||| |||||| ||| |||||| | |||||||| ||||  
seq2  TGCACCTAATTGAG-AACTGC-ACA-GATAATTTAAGAACTCAAGTGT--  45

seq1  GAGGTGAACTGCCAGGCCAAAAATTGATACTGT-AAAAAAAAGTCTGTGG  97
      |||||| |||| |  |||||||| ||||||||| ||||||||||||||||
seq2  GAGGTG-ACTGGCCAGCCAAAAA-TGATACTGTAAAAAAAAAGTCTGTGG  93

seq1  TGGGAAAAGAAAAATGGGGTATCACAAGGTTTGAAATTGATTTTCAACAG  147
      |||  |||||||||| ||||||||||||| |||||  |||||||||||||
seq2  TGG--AAAGAAAAAT-GGGTATCACAAGG-TTGAA--TGATTTTCAACAG  137

seq1  ATGTTAATATTATTAGACAAGAAATCAAGTTCTAGTAGGTTGACTATGAA  197
      ||| ||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ATG-TAATA-TATTAGACAAGAAATCAAGTTCTAGTAGGTTGACTATGAA  185

seq1  GGTATCTTGGCTTTTTGGAATTTTTAGTTCTAGAGTATAATTTTATAGCC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATCTTGGCTTTTTGGAATTTTTAGTTCTAGAGTATAATTTTATAGCC  235

seq1  ACCAAAACCATTGTATGGTGAGGGAGCACATAATCACTCTTAAAGTTTTG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAACCATTGTATGGTGAGGGAGCACATAATCACTCTTAAAGTTTTG  285

seq1  GAAAATATTAGCAGGTTTGTGGTTGAAGGTTCTATCTTTATATCTACATA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATATTAGCAGGTTTGTGGTTGAAGGTTCTATCTTTATATCTACATA  335

seq1  TGTTCTTGAGTTAAATGTATTTACATAAATTATATTAGAATTTTTATATT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTGAGTTAAATGTATTTACATAAATTATATTAGAATTTTTATATT  385

seq1  TATTTGAGTGGAACCAGGCAACTGGGGAGTAACAACATCCAAGTTTATAC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGAGTGGAACCAGGCAACTGGGGAGTAACAACATCCAAGTTTATAC  435

seq1  TGTGATTGGCATTCTCACCATCAGCCCATGGTAATGAGCCTGGCAGGAAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATTGGCATTCTCACCATCAGCCCATGGTAATGAGCCTGGCAGGAAG  485

seq1  TTTGGATGCACACACTCCTCACTGCACAGTAAATTCCATATACTCAAAAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGATGCACACACTCCTCACTGCACAGTAAATTCCATATACTCAAAAC  535

seq1  TCTTTGATTACTTCTAGCAGCAGAAATTGTCATATTCTACCTCAAATCTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGATTACTTCTAGCAGCAGAAATTGTCATATTCTACCTCAAATCTG  585

seq1  TCAGTGAGAAAATTTGTCTGTACACTATTTCAATAGGCACATTGTAAGCA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGAGAAAATTTGTCTGTACACTATTTCAATAGGCACATTGTAAGCA  635

seq1  TACCTCATAAAGGACAGGACACATATCCGCTTACGTAGGATAGATGTATG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCATAAAGGACAGGACACATATCCGCTTACGTAGGATAGATGTATG  685

seq1  GAACAAATCTCTTAGAGAAGGTTTAGTCTTTGCTGCCTCAAGTTCTGCCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAATCTCTTAGAGAAGGTTTAGTCTTTGCTGCCTCAAGTTCTGCCT  735

seq1  TCATACTTGTTCTCACAATCTTTGAAAATAAAATCAACACTTTTTTTAGT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACTTGTTCTCACAATCTTTGAAAATAAAATCAACACTTTTTTTAGT  785

seq1  TGTCACAAAGTGATGAGAACTCCAGGGTATTTTGGACACTTGTAGAAGAC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACAAAGTGATGAGAACTCCAGGGTATTTTGGACACTTGTAGAAGAC  835

seq1  CAGATCAATAATTATTGTTCTACATACTGAAAATATAAACACCAAAGATA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCAATAATTATTGTTCTACATACTGAAAATATAAACACCAAAGATA  885

seq1  AATTTACACCCAAAAATTAGAGTGAAATGAAAGTCCAGGAGACAAAAAGA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTACACCCAAAAATTAGAGTGAAATGAAAGTCCAGGAGACAAAAAGA  935

seq1  CACTCAGGGGATTTCTACAGTGAGTATTAAAGAAGGGATTATAGGTGCTT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAGGGGATTTCTACAGTGAGTATTAAAGAAGGGATTATAGGTGCTT  985

seq1  AATGAACATTAAAGGAGTCCTTGGAGCTGCAGATAAAGGTTAGAAAGGAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAACATTAAAGGAGTCCTTGGAGCTGCAGATAAAGGTTAGAAAGGAA  1035

seq1  AATAATTTAAGAGTTACTTAACATAAAATCCAAATTTTATTTAGACCATT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTTAAGAGTTACTTAACATAAAATCCAAATTTTATTTAGACCATT  1085

seq1  GAGTTTCAATGCTAATGGTACTTATATTTGACTTCCATTGATTCTGAATG  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTCAATGCTAATGGTACTTATATTTGACTTCCATTGATTCTGAATG  1135

seq1  ACTGAAAATAGATTCAGGAAAAAGAATTC  1176
      |||||||||||||||||||||||||||||
seq2  ACTGAAAATAGATTCAGGAAAAAGAATTC  1164