BAC Information

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BAC

Clone NameB6Ng01-278P23
Chromosome19 (Build37)
Map Location 49,053,465 - 49,054,001
singlet/doubletsinglet
Overlap genenone
Upstream geneGm969, LOC670576, Sorcs3, LOC100042896
Downstream geneLOC629448, Siah1-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-278P23.bB6Ng01-278P23.g
ACCGA079093GA079094
length1,0691,101
definitionB6Ng01-278P23.b B6Ng01-278P23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttttgagttctttatatattttggatattagtcccc
tatctgattcaggataggtaaagatcctttctcaatatgatggtggcctt
tttgtcttattgacagtgtcttttgccttacagaagttttgcaactttat
gaggtcccatttgttgattctcgatcttatagcacaatccattgctgttc
tattcaggaattttcccctgtttgggtacattgtggcttcattttcatta
aactctaaaacgtctttaatttctttctttattccttccttgaccaagtt
atcattgagaagacttttgttcagtttcaacgtgaaagttggctttctat
tatttatgttgttattgaagatcagccttagtccatggtgatctgatagg
atgcatgggacaatttcaatatttatttgtctcttgaagcttgttttgtg
atcaattatatggtcaattttggagaaggaaccatgaggtgctgagaaga
tgttatatccttttgttttaggataaaatgttctatagatatctgataaa
tccatttgtttcataacttctgttactttcactgtgtccctgtttagttt
ttgtttccaggttctgtccattgatgaatgtggtgtgttgaagtctccca
ctattattgtgtgaggtgcaatgtgtggtttgagctttactaaagtctct
ttaatgaatgtggctgcccttgcatttggagcatagatattcagaattga
gatttcctcttggaggattttaactttgatgagtatgaagtgcccctcct
ggtctttttttgataactttgggttggaagtcgattttattcatattaga
atggctactccagattgttcttcagaccatttgcttggaaattgttttcc
agcttcattctgaggtagtgtttgtctttttccctgagacgggtttctgt
aagcagccaaatattgggtctgtttgtgtagcaagtctgttagtctatgg
tccttaatggggaattgag

gaattcttggtttagttctatactccattttttttgatagggttgcttgg
ttttttggtgattaatttcttgagttctttatatattttggatattagcc
ctctatcggatgtgggattagtgaagattttttcccaatctgtaggttgc
aaatttgtcttattgactatgtcctttgtcttacagaagctttccagttt
tatgaggtcccagtgatcaattcttgatcttagataatgagccactgtag
gtctgttttgggaatttccacctgtgccaatgagttcaaggatctttccc
aatttctcttctattagattcagtgtatctggttttatgttgaggtcctt
gattcacttggacttgagctttgtaccaggtgacaagaatgggtctattt
ccattcttctacatacagacagccagttataccagcactatttattgaag
atgttttctttgttccattgtatatttttggcatgtttgtcaaagatcaa
tgactgttaagtgtgtggttttattgctgggtctttaattctattccagt
gattgatcagcatgtctgtctctgtaccaagaccatgcagtttttatcac
tactgcagtaaagcttgaggttatggatggtgattcctccagctgttctt
ttattgttaagaattgtttctgctattctgtttttttttttttttttttt
tgcctttccagatgaattttgagaattactctttacttttctttgaagaa
ttatgttgggattttgttggggatttcattgaatctatagatggccattt
ttattatggttaattctgccaatcccatgagcatggtagatctctctatt
tttggatatctctcaaattctttcatgagatacttgaaattatgtcatac
aggtctttccactgtttgttagggtaaccctaaaagattttatattattt
gtagctatgtggacgggagaatttttcctaggttttatcagcttttatca
tgatactgaggctactgattattgaatattatatccggctacttgctgat
ggttaggagccggaaggttcctgtaattgtgctccttagtatcatacagc
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_49053465_49054001
seq2: B6Ng01-278P23.b_583_1112 (reverse)

seq1  CTCAATTCCCCAATAAAAAGACATAGACTAACAGACTGGCTACACAAACA  50
      |||||||||||| |||  |  |||||||||||||||| ||||||||||||
seq2  CTCAATTCCCCATTAAGGA-CCATAGACTAACAGACTTGCTACACAAACA  49

seq1  GGACCCAACATTCTGCTGCTTACAGGAAACCCATCTCAGGGAAAAAGACA  100
       ||||||| |||  |||||||||| ||||||| |||||||||||||||||
seq2  -GACCCAATATTTGGCTGCTTACA-GAAACCCGTCTCAGGGAAAAAGACA  97

seq1  GACACTACCTCAGAGTGAAAAGCTGGAAAACAATTTTCCAAGCAAATGGT  150
       ||||||||||||| ||  |||||||||||||| ||||||||||||||||
seq2  AACACTACCTCAGAATG--AAGCTGGAAAACAA-TTTCCAAGCAAATGGT  144

seq1  CTGAAGAAACAAGCTGGAGTAGCCATTCTAATATCGGATAAAATCGACTT  200
      |||||| ||||| ||||||||||||||||||||| | |||||||||||||
seq2  CTGAAG-AACAATCTGGAGTAGCCATTCTAATAT-GAATAAAATCGACTT  192

seq1  CCAACCCAAAGTTATC-AAGAAAGACAAGGAGGGACACTTCATACTCATC  249
      |||||||||||||||| || |||||| ||||||| |||||||||||||||
seq2  CCAACCCAAAGTTATCAAAAAAAGACCAGGAGGGGCACTTCATACTCATC  242

seq1  AAAGGTAAAATCCTCCAAGAGGAACTCTCAATTCTGAATATCTACACTCC  299
      |||| ||||||||||||||||||| |||||||||||||||||||  ||||
seq2  AAAGTTAAAATCCTCCAAGAGGAAATCTCAATTCTGAATATCTATGCTCC  292

seq1  AAATGCAAGGGCAGCCACATTCATTAAAGACATTTTAGTAAAGCTCAAAG  349
      |||||||||||||||||||||||||||||| | |||||||||||||||| 
seq2  AAATGCAAGGGCAGCCACATTCATTAAAGAGACTTTAGTAAAGCTCAAAC  342

seq1  CACACATTGCACCTCACACAATAATAGTGGGAGACTTCAACACACCACTT  399
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CACACATTGCACCTCACACAATAATAGTGGGAGACTTCAACACACCACAT  392

seq1  TCATCAAGGGACAGATCGTGGAAACAGAAACTAAACAGGGACACAGTGAA  449
      ||||||| ||||||| | |||||||| |||||||||||||||||||||||
seq2  TCATCAATGGACAGAACCTGGAAACAAAAACTAAACAGGGACACAGTGAA  442

seq1  ACTAACAGAAGTTATGAAACAAATGGACCTAACAGATATCTACAAAACAT  499
      | |||||||||||||||||||||||||  || |||||||||| | |||||
seq2  AGTAACAGAAGTTATGAAACAAATGGATTTATCAGATATCTATAGAACAT  492

seq1  TTTATCCTAAAACAAAAGGATATACCTTCTTCTCAGCA  537
      |||||||||||||||||||||||| | |||||||||||
seq2  TTTATCCTAAAACAAAAGGATATAACATCTTCTCAGCA  530


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