BAC Information

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BAC

Clone NameB6Ng01-281E11
Chromosome19 (Build37)
Map Location 34,684,286 - 34,685,428
singlet/doubletsinglet
Overlap geneLOC667370
Upstream geneEG668106, EG668112, EG668114, EG329055, EG433241, LOC668127, Lipf, Lipk, EG383462, Lipn, Ankrd22, Stambpl1, Acta2, Fas, Ch25h, Lipa, Ifit2, Ifit3, OTTMUSG00000016644
Downstream gene2010002M12Rik, Ifit1, Slc16a12, LOC676714, Pank1, Mphosph1, LOC383464, LOC100042292
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-281E11.bB6Ng01-281E11.g
ACCGA080798GA080799
length1,151599
definitionB6Ng01-281E11.b B6Ng01-281E11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccctgcaattttgcaccttaatcatctgcaaaagctgcttatgac
tcaggacagaaacatagtataatttcagaggctgtcattctttatccctg
ttctaatttacaaggtggcaggtgcacctcagaaagaagaggaccctgat
actgtgcttcccacctctgataaaacagatttcaatactgagcatggtca
tggacattcccaagcccagctttcaggagtggagtggcgcagaagtcagc
tgatctgtgtgcatttgaagccagccaaggtgacatgaggagcctctgat
tcagaaaagagaaaagaaaggaaggaatttcatgttctctgagacataaa
aattaggtggagctttagattacagaattatccttgagcactcttgaaga
ggaatcagaaggacatgaagataactacaaaacagcaacccacgaattat
ttgtttagctgagctagaactctaggtgttgtgttctaggtgtctgatct
cctgaggcagactgttgtgaacgaggagtgacccatgcatcttcaaggcc
ttgactgacttcagctcttccctgcctctgcccttacacagatttgagta
taaaggagaaagatgctgtgtcagctaatttccactttcaagctgatggg
atgtataattaccatagaaacacacctttgggtatgtctaggaagtttgt
caaaaacatttaactttacagtacaagtcttccaaagtgtgggtggcaaa
tcacctgagccaggatccacgattaaattaaaaaaataaataaataaagc
aagctgggcaccagtatctacctgcctctgcttcctcactaaccacagtg
agagcagcatgtgctgttaccaccatgcattcactgcctaattgtcacct
caaactctaagctgacataaattaacattttcttccttaagttgctttca
tcgggtctcttataatagcatcctaagcaatgtaactaacacagagagac
agacataatgcacaattttggttaacctgggtataagaaaatttagacat
aggaaccatttactgtctagacactaaaagaaccaaaacaaggcaaagcc
tgtacctaagaacaagaaactttttcattggagactttacagagttctta
t
gaattcaatggggggattgggatactgaccgagtcacaaaaccttagaca
cacaatttttcctatctacaagatatgcaggggtaaaaaaaaaaaatgga
gcagaatttgaaggaagggccaacaaaagactggcccagcttgagatcaa
tgccatgagaggtatcccaccccagacactattaaagatacagggatcca
tagccaaacattaagcagagcttgggggaatcctgtggaagaagtggagg
gaggattgaaggagccagagggatcaaggacacaagcgaacctacagaat
caactaacctgggggctcacagccgctgaattgccaaccagagagcacgc
ataggactgacctaggctctctgcacatacgtgacagatgtgcagctggg
tcttcgtgcaggactccgaaagtgggagcgggggctgtctctgaatagac
tgcctgccttcggatccctttcccctaactgggctgccttgtcgaatctc
gatagaagaagatccacctagtcttacttgctatgccaaggctggttgat
agccatgggaagcctctgttcctctgaggagaaggggaggggagggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_34684286_34685428
seq2: B6Ng01-281E11.b_43_1193 (reverse)

seq1  ATAAGAACCTCCTGTAAAGTCTC--ATGAAAA--GCTCTTGTTC-TAGGT  45
      ||||||||   ||||||||||||  |||||||    |||||||| |||||
seq2  ATAAGAAC--TCTGTAAAGTCTCCAATGAAAAAGTTTCTTGTTCTTAGGT  48

seq1  ACA-GCTTTGCC-TGTTTTGG-TCTTTTAGTGTCTAGACAGTAAAT-GTT  91
      ||| |||||||| |||||||| |||||||||||||||||||||||| |||
seq2  ACAGGCTTTGCCTTGTTTTGGTTCTTTTAGTGTCTAGACAGTAAATGGTT  98

seq1  CCTATGTCTAAA-TTTCTTATAACCCAGGTTAACC-AAATTGTGCATTAT  139
      |||||||||||| |||||||| ||||||||||||| ||||||||||||||
seq2  CCTATGTCTAAATTTTCTTAT-ACCCAGGTTAACCAAAATTGTGCATTAT  147

seq1  GTCTGTCTCTCTGTGTTAGTTACATTGCTTAGGATGCTATTATAAGAGAC  189
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTCTCTCTGTGTTAGTTACATTGCTTAGGATGCTATTATAAGAGAC  197

seq1  CCGATGAAAGCAACTTAAGGAAGAAAATGTTAATTTATGTCAGCTTAGAG  239
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGATGAAAGCAACTTAAGGAAGAAAATGTTAATTTATGTCAGCTTAGAG  247

seq1  TTTGAGGTGACAATTAGGCAGTGAATGCATGGTGGTAACAGCACATGCTG  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGGTGACAATTAGGCAGTGAATGCATGGTGGTAACAGCACATGCTG  297

seq1  CTCTCACTGTGGTTAGTGAGGAAGCAGAGGCAGGTAGATACTGGTGCCCA  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCACTGTGGTTAGTGAGGAAGCAGAGGCAGGTAGATACTGGTGCCCA  347

seq1  GCTTGCTTTATTTATTTATTTTTTTAATTTAATCGTGGATCCTGGCTCAG  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCTTTATTTATTTATTTTTTTAATTTAATCGTGGATCCTGGCTCAG  397

seq1  GTGATTTGCCACCCACACTTTGGAAGACTTGTACTGTAAAGTTAAATGTT  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTTGCCACCCACACTTTGGAAGACTTGTACTGTAAAGTTAAATGTT  447

seq1  TTTGACAAACTTCCTAGACATACCCAAAGGTGTGTTTCTATGGTAATTAT  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACAAACTTCCTAGACATACCCAAAGGTGTGTTTCTATGGTAATTAT  497

seq1  ACATCCCATCAGCTTGAAAGTGGAAATTAGCTGACACAGCATCTTTCTCC  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCCATCAGCTTGAAAGTGGAAATTAGCTGACACAGCATCTTTCTCC  547

seq1  TTTATACTCAAATCTGTGTAAGGGCAGAGGCAGGGAAGAGCTGAAGTCAG  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATACTCAAATCTGTGTAAGGGCAGAGGCAGGGAAGAGCTGAAGTCAG  597

seq1  TCAAGGCCTTGAAGATGCATGGGTCACTCCTCGTTCACAACAGTCTGCCT  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGCCTTGAAGATGCATGGGTCACTCCTCGTTCACAACAGTCTGCCT  647

seq1  CAGGAGATCAGACACCTAGAACACAACACCTAGAGTTCTAGCTCAGCTAA  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGATCAGACACCTAGAACACAACACCTAGAGTTCTAGCTCAGCTAA  697

seq1  ACAAATAATTCGTGGGTTGCTGTTTTGTAGTTATCTTCATGTCCTTCTGA  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATAATTCGTGGGTTGCTGTTTTGTAGTTATCTTCATGTCCTTCTGA  747

seq1  TTCCTCTTCAAGAGTGCTCAAGGATAATTCTGTAATCTAAAGCTCCACCT  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTTCAAGAGTGCTCAAGGATAATTCTGTAATCTAAAGCTCCACCT  797

seq1  AATTTTTATGTCTCAGAGAACATGAAATTCCTTCCTTTCTTTTCTCTTTT  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTATGTCTCAGAGAACATGAAATTCCTTCCTTTCTTTTCTCTTTT  847

seq1  CTGAATCAGAGGCTCCTCATGTCACCTTGGCTGGCTTCAAATGCACACAG  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATCAGAGGCTCCTCATGTCACCTTGGCTGGCTTCAAATGCACACAG  897

seq1  ATCAGCTGACTTCTGCGCCACTCCACTCCTGAAAGCTGGGCTTGGGAATG  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCTGACTTCTGCGCCACTCCACTCCTGAAAGCTGGGCTTGGGAATG  947

seq1  TCCATGACCATGCTCAGTATTGAAATCTGTTTTATCAGAGGTGGGAAGCA  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGACCATGCTCAGTATTGAAATCTGTTTTATCAGAGGTGGGAAGCA  997

seq1  CAGTATCAGGGTCCTCTTCTTTCTGAGGTGCACCTGCCACCTTGTAAATT  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATCAGGGTCCTCTTCTTTCTGAGGTGCACCTGCCACCTTGTAAATT  1047

seq1  AGAACAGGGATAAAGAATGACAGCCTCTGAAATTATACTATGTTTCTGTC  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAGGGATAAAGAATGACAGCCTCTGAAATTATACTATGTTTCTGTC  1097

seq1  CTGAGTCATAAGCAGCTTTTGCAGATGATTAAGGTGCAAAATTGCAGGGA  1139
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTCATAAGCAGCTTTTGCAGATGATTAAGGTGCAAAATTGCAGGGA  1147

seq1  ATTC  1143
      ||||
seq2  ATTC  1151